-
1
-
-
66149099261
-
Epidemiology of antituberculosis drug resistance 2002-07: an updated analysis of the Global Project on Anti-Tuberculosis Drug Resistance Surveillance
-
Wright A, Zignol M, Van Deun A, Falzon D, Gerdes SR, et al. (2009) Epidemiology of antituberculosis drug resistance 2002-07: an updated analysis of the Global Project on Anti-Tuberculosis Drug Resistance Surveillance. Lancet 373: 1861-1873.
-
(2009)
Lancet
, vol.373
, pp. 1861-1873
-
-
Wright, A.1
Zignol, M.2
van Deun, A.3
Falzon, D.4
Gerdes, S.R.5
-
2
-
-
79960285198
-
Resistance to first-line tuberculosis drugs in three cities of Nigeria
-
Lawson L, Yassin MA, Abdurrahman ST, Parry CM, Dacombe R, et al. (2011) Resistance to first-line tuberculosis drugs in three cities of Nigeria. Trop Med Int Health.
-
(2011)
Trop Med Int Health
-
-
Lawson, L.1
Yassin, M.A.2
Abdurrahman, S.T.3
Parry, C.M.4
Dacombe, R.5
-
3
-
-
77954571687
-
Genetic diversity of Mycobacterium tuberculosis Complex in Jos, Nigeria
-
Ani A, Bruvik T, Okoh Y, Agaba P, Agbaji O, et al. (2010) Genetic diversity of Mycobacterium tuberculosis Complex in Jos, Nigeria. BMC Infect Dis 10: 189.
-
(2010)
BMC Infect Dis
, vol.10
, pp. 189
-
-
Ani, A.1
Bruvik, T.2
Okoh, Y.3
Agaba, P.4
Agbaji, O.5
-
4
-
-
84859912953
-
Molecular epidemiology and genetic diversity of Mycobacterium tuberculosis complex in the Cross River State, Nigeria
-
Thumamo BP, Asuquo AE, Abia-Bassey LN, Lawson L, Hill V, et al. (2011) Molecular epidemiology and genetic diversity of Mycobacterium tuberculosis complex in the Cross River State, Nigeria. Infect Genet Evol.
-
(2011)
Infect Genet Evol
-
-
Thumamo, B.P.1
Asuquo, A.E.2
Abia-Bassey, L.N.3
Lawson, L.4
Hill, V.5
-
5
-
-
79957441498
-
Molecular epidemiology of human and animal tuberculosis in Ibadan, Southwestern Nigeria
-
Jenkins AO, Cadmus SI, Venter EH, Pourcel C, Hauk Y, et al. (2011) Molecular epidemiology of human and animal tuberculosis in Ibadan, Southwestern Nigeria. Vet Microbiol 151: 139-147.
-
(2011)
Vet Microbiol
, vol.151
, pp. 139-147
-
-
Jenkins, A.O.1
Cadmus, S.I.2
Venter, E.H.3
Pourcel, C.4
Hauk, Y.5
-
6
-
-
78650870351
-
Spoligotype profile of Mycobacterium tuberculosis complex strains from HIV-positive and -negative patients in Nigeria: a comparative analysis
-
Cadmus S, Hill V, van Soolingen D, Rastogi N, (2011) Spoligotype profile of Mycobacterium tuberculosis complex strains from HIV-positive and-negative patients in Nigeria: a comparative analysis. J Clin Microbiol 49: 220-226.
-
(2011)
J Clin Microbiol
, vol.49
, pp. 220-226
-
-
Cadmus, S.1
Hill, V.2
van Soolingen, D.3
Rastogi, N.4
-
7
-
-
38349002419
-
Genotypic diversity of extensively drug-resistant tuberculosis (XDR-TB) in South Africa
-
Mlambo CK, Warren RM, Poswa X, Victor TC, Duse AG, et al. (2008) Genotypic diversity of extensively drug-resistant tuberculosis (XDR-TB) in South Africa. Int J Tuberc Lung Dis 12: 99-104.
-
(2008)
Int J Tuberc Lung Dis
, vol.12
, pp. 99-104
-
-
Mlambo, C.K.1
Warren, R.M.2
Poswa, X.3
Victor, T.C.4
Duse, A.G.5
-
8
-
-
84859924241
-
Emergence and treatment of multidrug resistant (MDR) and extensively drug-resistant (XDR) tuberculosis in South Africa
-
Streicher EM, Muller B, Chihota V, Mlambo C, Tait M, et al. (2011) Emergence and treatment of multidrug resistant (MDR) and extensively drug-resistant (XDR) tuberculosis in South Africa. Infect Genet Evol.
-
(2011)
Infect Genet Evol
-
-
Streicher, E.M.1
Muller, B.2
Chihota, V.3
Mlambo, C.4
Tait, M.5
-
9
-
-
0346462903
-
Transfer of a Mycobacterium tuberculosis genotyping method, Spoligotyping, from a reverse line-blot hybridization, membrane-based assay to the Luminex multianalyte profiling system
-
Cowan LS, Diem L, Brake MC, Crawford JT, (2004) Transfer of a Mycobacterium tuberculosis genotyping method, Spoligotyping, from a reverse line-blot hybridization, membrane-based assay to the Luminex multianalyte profiling system. J Clin Microbiol 42: 474-477.
-
(2004)
J Clin Microbiol
, vol.42
, pp. 474-477
-
-
Cowan, L.S.1
Diem, L.2
Brake, M.C.3
Crawford, J.T.4
-
10
-
-
33750085449
-
Proposal for Standardization of Optimized Mycobacterial Interspersed Repetitive Unit-Variable-Number Tandem Repeat Typing of Mycobacterium tuberculosis
-
Supply P, Allix C, Lesjean S, Cardoso-Oelemann M, Rusch-Gerdes S, et al. (2006) Proposal for Standardization of Optimized Mycobacterial Interspersed Repetitive Unit-Variable-Number Tandem Repeat Typing of Mycobacterium tuberculosis. J Clin Microbiol 44: 4498-4510.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 4498-4510
-
-
Supply, P.1
Allix, C.2
Lesjean, S.3
Cardoso-Oelemann, M.4
Rusch-Gerdes, S.5
-
11
-
-
77956805466
-
High resolution typing by integration of genome sequencing data in a large tuberculosis cluster
-
Schurch AC, Kremer K, Daviena O, Kiers A, Boeree MJ, et al. (2010) High resolution typing by integration of genome sequencing data in a large tuberculosis cluster. J Clin Microbiol 48: 3403-3406.
-
(2010)
J Clin Microbiol
, vol.48
, pp. 3403-3406
-
-
Schurch, A.C.1
Kremer, K.2
Daviena, O.3
Kiers, A.4
Boeree, M.J.5
-
12
-
-
79951995822
-
Whole-genome sequencing and social-network analysis of a tuberculosis outbreak
-
Gardy JL, Johnston JC, Ho Sui SJ, Cook VJ, Shah L, et al. (2011) Whole-genome sequencing and social-network analysis of a tuberculosis outbreak. N Engl J Med 364: 730-739.
-
(2011)
N Engl J Med
, vol.364
, pp. 730-739
-
-
Gardy, J.L.1
Johnston, J.C.2
Ho Sui, S.J.3
Cook, V.J.4
Shah, L.5
-
13
-
-
79953049505
-
The forest behind the tree: phylogenetic exploration of a dominant Mycobacterium tuberculosis strain lineage from a high tuberculosis burden country
-
Cardoso Oelemann M, Gomes HM, Willery E, Possuelo L, Batista Lima KV, et al. (2011) The forest behind the tree: phylogenetic exploration of a dominant Mycobacterium tuberculosis strain lineage from a high tuberculosis burden country. PLoS One 6: e18256.
-
(2011)
PLoS One
, vol.6
-
-
Cardoso Oelemann, M.1
Gomes, H.M.2
Willery, E.3
Possuelo, L.4
Batista Lima, K.V.5
-
14
-
-
79960147524
-
Genotypic diversity and drug susceptibility patterns among M. tuberculosis complex isolates from South-Western Ghana
-
Yeboah-Manu D, Asante-Poku A, Bodmer T, Stucki D, Koram K, et al. (2011) Genotypic diversity and drug susceptibility patterns among M. tuberculosis complex isolates from South-Western Ghana. PLoS One 6: e21906.
-
(2011)
PLoS One
, vol.6
-
-
Yeboah-Manu, D.1
Asante-Poku, A.2
Bodmer, T.3
Stucki, D.4
Koram, K.5
-
15
-
-
76649135130
-
Mycobacterium tuberculosis complex CRISPR genotyping: improving efficiency, throughput and discriminative power of 'spoligotyping' with new spacers and a microbead-based hybridization assay
-
Zhang J, Abadia E, Refregier G, Tafaj S, Boschiroli ML, et al. (2010) Mycobacterium tuberculosis complex CRISPR genotyping: improving efficiency, throughput and discriminative power of 'spoligotyping' with new spacers and a microbead-based hybridization assay. J Med Microbiol 59: 285-294.
-
(2010)
J Med Microbiol
, vol.59
, pp. 285-294
-
-
Zhang, J.1
Abadia, E.2
Refregier, G.3
Tafaj, S.4
Boschiroli, M.L.5
-
16
-
-
66149157596
-
First insight into genetic diversity of the Mycobacterium tuberculosis complex in Albania obtained by multilocus variable-number tandem-repeat analysis and spoligotyping reveals the presence of beijing multidrug-resistant isolates
-
Tafaj S, Zhang J, Hauck Y, Pourcel C, Hafizi H, et al. (2009) First insight into genetic diversity of the Mycobacterium tuberculosis complex in Albania obtained by multilocus variable-number tandem-repeat analysis and spoligotyping reveals the presence of beijing multidrug-resistant isolates. J Clin Microbiol 47: 1581-1584.
-
(2009)
J Clin Microbiol
, vol.47
, pp. 1581-1584
-
-
Tafaj, S.1
Zhang, J.2
Hauck, Y.3
Pourcel, C.4
Hafizi, H.5
-
17
-
-
33646227714
-
Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, Population Genetics, and Epidemiology
-
Brudey K, Driscoll J, Rigouts L, Prodinger WM, Gori A, et al. (2006) Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, Population Genetics, and Epidemiology. BMC Microbiol 6: 23.
-
(2006)
BMC Microbiol
, vol.6
, pp. 23
-
-
Brudey, K.1
Driscoll, J.2
Rigouts, L.3
Prodinger, W.M.4
Gori, A.5
-
18
-
-
84859926842
-
SITVITWEB - A publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology
-
[Epub Ahead of Print]
-
Demay C, Liens B, Burguière T, Hill V, Couvin D, et al. (2012) SITVITWEB - A publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology. Infect Genet Evol Feb. 17 [Epub ahead of print].
-
(2012)
Infect Genet Evol
, vol.17
-
-
Demay, C.1
Liens, B.2
Burguière, T.3
Hill, V.4
Couvin, D.5
-
19
-
-
0028302048
-
The Epidemiology of Tuberculosis in San Francisco
-
Small PM, Hopewell PC, Singh SP, Paz A, Parsonnet J, et al. (1994) The Epidemiology of Tuberculosis in San Francisco. N Engl J Med 330: 1703-1709.
-
(1994)
N Engl J Med
, vol.330
, pp. 1703-1709
-
-
Small, P.M.1
Hopewell, P.C.2
Singh, S.P.3
Paz, A.4
Parsonnet, J.5
-
20
-
-
63049136140
-
African 1, an epidemiologically important clonal complex of Mycobacterium bovis dominant in Mali, Nigeria, Cameroon, and Chad
-
Muller B, Hilty M, Berg S, Garcia-Pelayo MC, Dale J, et al. (2009) African 1, an epidemiologically important clonal complex of Mycobacterium bovis dominant in Mali, Nigeria, Cameroon, and Chad. J Bacteriol 191: 1951-1960.
-
(2009)
J Bacteriol
, vol.191
, pp. 1951-1960
-
-
Muller, B.1
Hilty, M.2
Berg, S.3
Garcia-Pelayo, M.C.4
Dale, J.5
-
21
-
-
34247152126
-
Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development
-
Gagneux S, Small PM, (2007) Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development. Lancet Infect Dis 7: 328-337.
-
(2007)
Lancet Infect Dis
, vol.7
, pp. 328-337
-
-
Gagneux, S.1
Small, P.M.2
-
22
-
-
66449136330
-
Variable-number tandem repeat 3690 polymorphism in Indian clinical isolates of Mycobacterium tuberculosis and its influence on transcription
-
Akhtar P, Singh S, Bifani P, Kaur S, Srivastava BS, et al. (2009) Variable-number tandem repeat 3690 polymorphism in Indian clinical isolates of Mycobacterium tuberculosis and its influence on transcription. J Med Microbiol 58: 798-805.
-
(2009)
J Med Microbiol
, vol.58
, pp. 798-805
-
-
Akhtar, P.1
Singh, S.2
Bifani, P.3
Kaur, S.4
Srivastava, B.S.5
-
23
-
-
0031750390
-
Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats
-
Frothingham R, Meeker-O'Connell WA, (1998) Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats. Microbiology 144 (Pt 5): 1189-1196.
-
(1998)
Microbiology
, vol.144
, Issue.Pt 5
, pp. 1189-1196
-
-
Frothingham, R.1
Meeker-O'Connell, W.A.2
-
24
-
-
77956268224
-
Resolving lineage assignation on Mycobacterium tuberculosis clinical isolates classified by spoligotyping with a new high-throughput 3R SNPs based method
-
Abadia E, Zhang J, Vultos TD, Ritacco V, Kremer K, et al. (2010) Resolving lineage assignation on Mycobacterium tuberculosis clinical isolates classified by spoligotyping with a new high-throughput 3R SNPs based method. Infect Genet Evol 10 1066-1074.
-
(2010)
Infect Genet Evol
, vol.10
, pp. 1066-1074
-
-
Abadia, E.1
Zhang, J.2
Vultos, T.D.3
Ritacco, V.4
Kremer, K.5
-
25
-
-
0037505359
-
Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon
-
Niobe-Eyangoh SN, Kuaban C, Sorlin P, Cunin P, Thonnon J, et al. (2003) Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon. J Clin Microbiol 41: 2547-2553.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 2547-2553
-
-
Niobe-Eyangoh, S.N.1
Kuaban, C.2
Sorlin, P.3
Cunin, P.4
Thonnon, J.5
-
26
-
-
8644224063
-
Molecular characteristics of strains of the cameroon family, the major group of Mycobacterium tuberculosis in a country with a high prevalence of tuberculosis
-
Niobe-Eyangoh SN, Kuaban C, Sorlin P, Thonnon J, Vincent V, et al. (2004) Molecular characteristics of strains of the cameroon family, the major group of Mycobacterium tuberculosis in a country with a high prevalence of tuberculosis. J Clin Microbiol 42: 5029-5035.
-
(2004)
J Clin Microbiol
, vol.42
, pp. 5029-5035
-
-
Niobe-Eyangoh, S.N.1
Kuaban, C.2
Sorlin, P.3
Thonnon, J.4
Vincent, V.5
-
27
-
-
0030911908
-
Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology
-
Kamerbeek J, Schouls L, Kolk A, van Agterveld M, van Soolingen D, et al. (1997) Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J Clin Microbiol 35: 907-914.
-
(1997)
J Clin Microbiol
, vol.35
, pp. 907-914
-
-
Kamerbeek, J.1
Schouls, L.2
Kolk, A.3
van Agterveld, M.4
van Soolingen, D.5
-
28
-
-
39149142575
-
CRISPR-a widespread system that provides acquired resistance against phages in bacteria and archaea
-
Sorek R, Kunin V, Hugenholtz P, (2008) CRISPR-a widespread system that provides acquired resistance against phages in bacteria and archaea. Nat Rev Microbiol 6: 181-186.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 181-186
-
-
Sorek, R.1
Kunin, V.2
Hugenholtz, P.3
-
29
-
-
70649084195
-
Genotyping of genetically monomorphic bacteria: DNA sequencing in mycobacterium tuberculosis highlights the limitations of current methodologies
-
Comas I, Homolka S, Niemann S, Gagneux S, (2009) Genotyping of genetically monomorphic bacteria: DNA sequencing in mycobacterium tuberculosis highlights the limitations of current methodologies. PLoS One 4: e7815.
-
(2009)
PLoS One
, vol.4
-
-
Comas, I.1
Homolka, S.2
Niemann, S.3
Gagneux, S.4
-
30
-
-
78650109126
-
Strain classification of Mycobacterium tuberculosis: congruence between large sequence polymorphisms and spoligotypes
-
Kato-Maeda M, Gagneux S, Flores LL, Kim EY, Small PM, et al. (2011) Strain classification of Mycobacterium tuberculosis: congruence between large sequence polymorphisms and spoligotypes. Int J Tuberc Lung Dis 15: 131-133.
-
(2011)
Int J Tuberc Lung Dis
, vol.15
, pp. 131-133
-
-
Kato-Maeda, M.1
Gagneux, S.2
Flores, L.L.3
Kim, E.Y.4
Small, P.M.5
-
31
-
-
84862078522
-
CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections
-
Fabre L, Zhang J, Guigon G, Le Hello S, Guibert V, et al. (2012) CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections. PloS One in Press.
-
(2012)
PloS One in Press
-
-
Fabre, L.1
Zhang, J.2
Guigon, G.3
Le Hello, S.4
Guibert, V.5
-
32
-
-
79551639986
-
A first assessment of the genetic diversity of Mycobacterium tuberculosis complex in Cambodia
-
Zhang J, Heng S, Le Moullec S, Refregier G, Gicquel B, et al. (2011) A first assessment of the genetic diversity of Mycobacterium tuberculosis complex in Cambodia. BMC Infect Dis 11: 42.
-
(2011)
BMC Infect Dis
, vol.11
, pp. 42
-
-
Zhang, J.1
Heng, S.2
Le Moullec, S.3
Refregier, G.4
Gicquel, B.5
-
33
-
-
0037022399
-
Determinants of cluster distribution in the molecular epidemiology of tuberculosis
-
Murray M, (2002) Determinants of cluster distribution in the molecular epidemiology of tuberculosis. Proc Natl Acad Sci U S A 99: 1538-1543.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 1538-1543
-
-
Murray, M.1
-
34
-
-
45249087278
-
Evolution and Diversity of Clonal Bacteria: The Paradigm of Mycobacterium tuberculosis
-
Dos Vultos T, Mestre O, Rauzier J, Golec M, Rastogi N, et al. (2008) Evolution and Diversity of Clonal Bacteria: The Paradigm of Mycobacterium tuberculosis. PLoS ONE 3: e1538.
-
(2008)
PLoS ONE
, vol.3
-
-
Dos Vultos, T.1
Mestre, O.2
Rauzier, J.3
Golec, M.4
Rastogi, N.5
-
35
-
-
33645922138
-
Molecular characterization and drug resistance testing of Mycobacterium tuberculosis isolates from Chad
-
Diguimbaye C, Hilty M, Ngandolo R, Mahamat HH, Pfyffer GE, et al. (2006) Molecular characterization and drug resistance testing of Mycobacterium tuberculosis isolates from Chad. J Clin Microbiol 44: 1575-1577.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 1575-1577
-
-
Diguimbaye, C.1
Hilty, M.2
Ngandolo, R.3
Mahamat, H.H.4
Pfyffer, G.E.5
-
36
-
-
33845926247
-
Genetic diversity and population structure of Mycobacterium tuberculosis in HIV-1-infected compared with uninfected individuals in Burkina Faso
-
Godreuil S, Renaud F, Van de Perre P, Carriere C, Torrea G, et al. (2007) Genetic diversity and population structure of Mycobacterium tuberculosis in HIV-1-infected compared with uninfected individuals in Burkina Faso. Aids 21: 248-250.
-
(2007)
Aids
, vol.21
, pp. 248-250
-
-
Godreuil, S.1
Renaud, F.2
van de Perre, P.3
Carriere, C.4
Torrea, G.5
-
37
-
-
84856582020
-
Spoligotyping of Mycobacterium africanum, Burkina Faso
-
Gomgnimbou MK, Refregier G, Diagbouga SP, Adama S, Kabore A, et al. (2012) Spoligotyping of Mycobacterium africanum, Burkina Faso. Emerg Infect Dis 18: 117-119.
-
(2012)
Emerg Infect Dis
, vol.18
, pp. 117-119
-
-
Gomgnimbou, M.K.1
Refregier, G.2
Diagbouga, S.P.3
Adama, S.4
Kabore, A.5
-
38
-
-
65249155889
-
Use of spoligotyping and large-sequence polymorphisms to study the population structure of the Mycobacterium tuberculosis complex in a cohort study of consecutive smear positive tuberculosis cases in the Gambia
-
de Jong BC, Antonio M, Awine T, Ogungbemi K, de Jong YP, et al. (2009) Use of spoligotyping and large-sequence polymorphisms to study the population structure of the Mycobacterium tuberculosis complex in a cohort study of consecutive smear positive tuberculosis cases in the Gambia. J Clin Microbiol.
-
(2009)
J Clin Microbiol
-
-
de Jong, B.C.1
Antonio, M.2
Awine, T.3
Ogungbemi, K.4
de Jong, Y.P.5
-
39
-
-
30744433392
-
Molecular analysis of human and bovine tubercle bacilli from a local setting in Nigeria
-
Cadmus S, Palmer S, Okker M, Dale J, Gover K, et al. (2006) Molecular analysis of human and bovine tubercle bacilli from a local setting in Nigeria. J Clin Microbiol 44: 29-34.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 29-34
-
-
Cadmus, S.1
Palmer, S.2
Okker, M.3
Dale, J.4
Gover, K.5
-
40
-
-
64349108498
-
DNA repair in Mycobacterium tuberculosis revisited
-
Dos Vultos T, Mestre O, Tonjum T, Gicquel B, (2009) DNA repair in Mycobacterium tuberculosis revisited. FEMS Microbiol Rev 33: 471-487.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 471-487
-
-
Dos Vultos, T.1
Mestre, O.2
Tonjum, T.3
Gicquel, B.4
-
41
-
-
79251645127
-
Phylogeny of Mycobacterium tuberculosis Beijing strains constructed from polymorphisms in genes involved in DNA replication, recombination and repair
-
Mestre O, Luo T, Dos Vultos T, Kremer K, Murray A, et al. (2011) Phylogeny of Mycobacterium tuberculosis Beijing strains constructed from polymorphisms in genes involved in DNA replication, recombination and repair. PLoS One 6: e16020.
-
(2011)
PLoS One
, vol.6
-
-
Mestre, O.1
Luo, T.2
Dos Vultos, T.3
Kremer, K.4
Murray, A.5
|