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Volumn 4, Issue , 2014, Pages

Species identification through mitochondrial rRNA genetic analysis

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA; RNA 16S; RNA, RIBOSOMAL, 12S;

EID: 84922099284     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep04089     Document Type: Article
Times cited : (160)

References (43)
  • 1
    • 0032903195 scopus 로고    scopus 로고
    • Multiplex amplification of mitochondrial DNA for human and species identification in forensic evaluation
    • Bataille, M., Crainic, K., Leterreux, M., Durigon, M. & de Mazancourt, P. Multiplex amplification of mitochondrial DNA for human and species identification in forensic evaluation. Forensic Sci Int 99, 165-70 (1999).
    • (1999) Forensic Sci Int , vol.99 , pp. 165-170
    • Bataille, M.1    Crainic, K.2    Leterreux, M.3    Durigon, M.4    De Mazancourt, P.5
  • 2
    • 0032957283 scopus 로고    scopus 로고
    • PCR-RFLP analysis of mitochondrial DNA: A reliable method for species identification
    • Wolf, C., Rentsch, J. & Hübner P. PCR-RFLP analysis of mitochondrial DNA: a reliable method for species identification. J Agric Food Chem 47, 1350-5 (1999).
    • (1999) J Agric Food Chem , vol.47 , pp. 1350-1355
    • Wolf, C.1    Rentsch, J.2    Hübner, P.3
  • 3
  • 4
    • 0030052531 scopus 로고    scopus 로고
    • Length variation, heteroplasmy and sequence divergence in the mitochondrial DNA of four species of sturgeon (Acipenser)
    • Brown, J. R., Beckenbach, K., Beckenbach, A. T. & Smith, M. J. Length variation, heteroplasmy and sequence divergence in the mitochondrial DNA of four species of sturgeon (Acipenser). Genetics 142, 525-35 (1996).
    • (1996) Genetics , vol.142 , pp. 525-535
    • Brown, J.R.1    Beckenbach, K.2    Beckenbach, A.T.3    Smith, M.J.4
  • 5
    • 54749151001 scopus 로고    scopus 로고
    • Mitochondrial DNA enrichment for species identification and evolutionary analysis
    • Burgener, M. & Hubner, P. Mitochondrial DNA enrichment for species identification and evolutionary analysis. Z. Lebensm. Unters. Forsch 207, 261-263 (1998).
    • (1998) Z. Lebensm. Unters. Forsch , vol.207 , pp. 261-263
    • Burgener, M.1    Hubner, P.2
  • 6
    • 0027335924 scopus 로고
    • Amplification and sequencing of DNA from a 120-135-million-year-old weevil
    • Cano, R. J., Poinar, H. N., Pieniazek, N. J., Acra, A. & Poinar, G. O. Jr. Amplification and sequencing of DNA from a 120-135-million-year-old weevil. Nature 363, 536-538 (1993).
    • (1993) Nature , vol.363 , pp. 536-538
    • Cano, R.J.1    Poinar, H.N.2    Pieniazek, N.J.3    Acra, A.4    Poinar, G.O.5
  • 7
    • 0027132359 scopus 로고
    • PCR-RFLP analysis on thirteen western Atlantic snappers (subfamily Lutjaninae): A simple method for species and stock identification
    • Chow, S., Clarke, M. E. & Walsh, P. J. PCR-RFLP analysis on thirteen western Atlantic snappers (subfamily Lutjaninae): a simple method for species and stock identification. Fish. Bull 91, 619-627 (1993).
    • (1993) Fish. Bull , vol.91 , pp. 619-627
    • Chow, S.1    Clarke, M.E.2    Walsh, P.J.3
  • 8
    • 0028837682 scopus 로고
    • Insertions and duplications of mtDNA in the nuclear genomes of Old World monkeys and hominoids
    • Collura, R. V. & Stewart, C. B. Insertions and duplications of mtDNA in the nuclear genomes of Old World monkeys and hominoids. Nature 378, 485-489 (1995).
    • (1995) Nature , vol.378 , pp. 485-489
    • Collura, R.V.1    Stewart, C.B.2
  • 9
    • 0027715265 scopus 로고
    • Isolation and characterization of animal mitochondrial DNA
    • DeSalle, R., Williams, A. K. & George M. Isolation and characterization of animal mitochondrial DNA. Methods Enzymol 224, 176-204 (1993).
    • (1993) Methods Enzymol , vol.224 , pp. 176-204
    • DeSalle, R.1    Williams, A.K.2    George, M.3
  • 10
    • 0027168787 scopus 로고
    • Mitochondrial cytochrome b: Evolution and structure of the protein
    • Esposti, M. D. et al. Mitochondrial cytochrome b: evolution and structure of the protein. Biochim Biophys Acta 1143, 243-71 (1993).
    • (1993) Biochim Biophys Acta , vol.1143 , pp. 243-271
    • Esposti, M.D.1
  • 11
    • 0022218885 scopus 로고
    • Absence of extensive recombination between inter and intraspecies mitochondrial DNA in mammalian cells
    • Hayashi, J., Tagashira, Y. & Yoshida, M. C. Absence of extensive recombination between inter and intraspecies mitochondrial DNA in mammalian cells. Exp Cell Res 160, 387-395 (1985).
    • (1985) Exp Cell Res , vol.160 , pp. 387-395
    • Hayashi, J.1    Tagashira, Y.2    Yoshida, M.C.3
  • 12
    • 0025764044 scopus 로고
    • Evolution of the cytochrome b gene of mammals
    • Irwin, D.M., Kocher, T. D. & Wilson, A. C. Evolution of the cytochrome b gene of mammals. J Mol Evol 32, 123-144 (1991).
    • (1991) J Mol Evol , vol.32 , pp. 123-144
    • Irwin, D.M.1    Kocher, T.D.2    Wilson, A.C.3
  • 13
    • 0033525773 scopus 로고    scopus 로고
    • Mitochondrial diseases in man and mouse
    • Wallance, D. C. Mitochondrial diseases in man and mouse. Science 283, 1482-1488 (1999).
    • (1999) Science , vol.283 , pp. 1482-1488
    • Wallance, D.C.1
  • 14
  • 15
    • 58149389099 scopus 로고    scopus 로고
    • Dopamine-induced programmed cell death is associated with cytochrome c release and caspase-3 activation in snail salivary gland cells
    • Pirger, Z., Rácz, B. & Kiss, T. Dopamine-induced programmed cell death is associated with cytochrome c release and caspase-3 activation in snail salivary gland cells. Biol Cell 101, 105-116 (2009).
    • (2009) Biol Cell , vol.101 , pp. 105-116
    • Pirger, Z.1    Rácz, B.2    Kiss, T.3
  • 16
    • 0019423856 scopus 로고
    • Sequence and organization of the human mitochondrial genome
    • Anderson, S. et al. Sequence and organization of the human mitochondrial genome. Nature 290, 457-465 (1981).
    • (1981) Nature , vol.290 , pp. 457-465
    • Anderson, S.1
  • 18
    • 0029816795 scopus 로고    scopus 로고
    • Random genetic drift in the female germline explains the rapid segregation of mammalian mitochondrial DNA
    • Jenuth, J. P., Perterson, A. C., Fu, K. & Shoubridge, E. A. Random genetic drift in the female germline explains the rapid segregation of mammalian mitochondrial DNA. Nat Genet 14, 146-151 (1997).
    • (1997) Nat Genet , vol.14 , pp. 146-151
    • Jenuth, J.P.1    Perterson, A.C.2    Fu, K.3    Shoubridge, E.A.4
  • 19
    • 0348252093 scopus 로고    scopus 로고
    • Sequence analysis of mitochondrial 12S rRNA gene can identify meat species
    • Girish, P. S.et al. Sequence analysis of mitochondrial 12S rRNA gene can identify meat species. Meat Sci 66, 551-6 (2004).
    • (2004) Meat Sci , vol.66 , pp. 551-556
    • Girish, P.1
  • 20
    • 0024382879 scopus 로고
    • Dynamics of mitochondrial DNA evolution in animals: Amplification and sequencing with conserved primers
    • Kocher, T. D. et al. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proc Natl Acad Sci USA 86, 6196-6200 (1989).
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 6196-6200
    • Kocher, T.D.1
  • 21
    • 0032519307 scopus 로고    scopus 로고
    • Automating the identification of DNA variations using quality-based fluorescence resequencing: Analysis of the human mitochondrial genome
    • Rieder, M. J., Taylor, S. L., Tobe, V. O. & Nickerson, D. A. Automating the identification of DNA variations using quality-based fluorescence resequencing: analysis of the human mitochondrial genome. Nucleic Acids Res 26, 967-973 (1998).
    • (1998) Nucleic Acids Res , vol.26 , pp. 967-973
    • Rieder, M.J.1    Taylor, S.L.2    Tobe, V.O.3    Nickerson, D.A.4
  • 22
    • 0344167734 scopus 로고    scopus 로고
    • Cosegregation of C-insertion at position 961 with the A1555G mutation of the mitochondrial 12S rRNA gene in a large Chinese family with maternally inherited hearing loss
    • Li, R. et al. Cosegregation of C-insertion at position 961 with the A1555G mutation of the mitochondrial 12S rRNA gene in a large Chinese family with maternally inherited hearing loss. Am J Med Genet A 124A, 113-7 (2004).
    • (2004) Am J Med Genet A , vol.124 A , pp. 113-117
    • Li, R.1
  • 23
    • 84926310813 scopus 로고    scopus 로고
    • Novel primer sets for species-specific amplification of the mitochondrial 12S rRNA genes in four Japanese woodpeckers (Picidae, Piciformes)
    • Mitsuhiro, N., Yasuyuki, I. & Syuiti, A. Novel primer sets for species-specific amplification of the mitochondrial 12S rRNA genes in four Japanese woodpeckers (Picidae, Piciformes). Meat Science 66, 551-556 (2004).
    • (2004) Meat Science , vol.66 , pp. 551-556
    • Mitsuhiro, N.1    Yasuyuki, I.2    Syuiti, A.3
  • 24
    • 0032903195 scopus 로고    scopus 로고
    • Multiplex amplification of mitochondrial DNA for human and species identification in forensic evaluation
    • Bataille, M., Crainic, K., Leterreux, M., Durigonb, M. & de Mazancourta, P. Multiplex amplification of mitochondrial DNA for human and species identification in forensic evaluation. Forensic Sci Int 99, 165-170 (1999).
    • (1999) Forensic Sci Int , vol.99 , pp. 165-170
    • Bataille, M.1    Crainic, K.2    Leterreux, M.3    Durigonb, M.4    De Mazancourta, P.5
  • 25
    • 70249083423 scopus 로고    scopus 로고
    • Molecular phylogeny and genetic identification of populations of two species of feirana frogs (amphibia: Anura, ranidae, dicroglossinae, paini) endemic to china
    • Wang, B. et al. Molecular phylogeny and genetic identification of populations of two species of feirana frogs (amphibia: anura, ranidae, dicroglossinae, paini) endemic to china. Zoolog Sci 26, 500-9 (2009).
    • (2009) Zoolog Sci , vol.26 , pp. 500-509
    • Wang, B.1
  • 26
    • 54949084663 scopus 로고    scopus 로고
    • Sequence characterization and polymerase chain reaction-restriction fragment length polymorphism of the mitochondrial DNA 12S rRNA gene provides a method for species identification of Indian deer
    • Gupta, A. R. et al. Sequence characterization and polymerase chain reaction-restriction fragment length polymorphism of the mitochondrial DNA 12S rRNA gene provides a method for species identification of Indian deer. Mitochondrial DNA 19, 394-400 (2008).
    • (2008) Mitochondrial DNA , vol.19 , pp. 394-400
    • Gupta, A.R.1
  • 27
    • 58449085214 scopus 로고    scopus 로고
    • Polymerase chain reaction-restriction fragment length polymorphism authentication of raw meats from game birds
    • Rojas, M. et al. Polymerase chain reaction-restriction fragment length polymorphism authentication of raw meats from game birds. J AOAC Int 91, 1416-22 (2008).
    • (2008) J AOAC Int , vol.91 , pp. 1416-1422
    • Rojas, M.1
  • 28
    • 38849197851 scopus 로고    scopus 로고
    • A polymerase chain reaction-restriction fragment length polymorphism method based on the analysis of a 16S rRNA/tRNA(Val) mitochondrial region for species identification of commercial penaeid shrimps (Crustacea: Decapoda: Penaeoidea) of food interest
    • Pascoal, A., Barros-Velázquez, J., Cepeda, A., Gallardo, J. M. & Calo-Mata, P. A polymerase chain reaction-restriction fragment length polymorphism method based on the analysis of a 16S rRNA/tRNA(Val) mitochondrial region for species identification of commercial penaeid shrimps (Crustacea: Decapoda: Penaeoidea) of food interest. Electrophoresis 29, 499-509 (2008).
    • (2008) Electrophoresis , vol.29 , pp. 499-509
    • Pascoal, A.1    Barros-Velázquez, J.2    Cepeda, A.3    Gallardo, J.M.4    Calo-Mata, P.5
  • 29
    • 0035110557 scopus 로고    scopus 로고
    • Identification of rockfish (Sebastes spp.) by restriction site analysis of the mitochondrial ND-3/ND-4 and 12S/16S rRNA gene regions
    • Gharrett, A. J., Gray, A. K. & Heifetz, J. Identification of rockfish (Sebastes spp.) by restriction site analysis of the mitochondrial ND-3/ND-4 and 12S/16S rRNA gene regions. Fish Bull 99, 49-62 (2001).
    • (2001) Fish Bull , vol.99 , pp. 49-62
    • Gharrett, A.J.1    Gray, A.K.2    Heifetz, J.3
  • 30
    • 35349001860 scopus 로고    scopus 로고
    • Technical note: Detection of cat, dog, and rat or mouse tissues in food and animal feed using species-specific polymerase chain reaction
    • Martín, I. et al. Technical note: Detection of cat, dog, and rat or mouse tissues in food and animal feed using species-specific polymerase chain reaction. J Anim Sci 85, 2734-9 (2007).
    • (2007) J Anim Sci , vol.85 , pp. 2734-2739
    • Martín, I.1
  • 31
    • 34247524635 scopus 로고    scopus 로고
    • Characterisation of peacock (Pavo cristatus) mitochondrial 12S rRNA sequence and its use in differentiation from closely related poultry species
    • Saini, M. et al. Characterisation of peacock (Pavo cristatus) mitochondrial 12S rRNA sequence and its use in differentiation from closely related poultry species. Br Poult Sci 48, 162-6 (2007).
    • (2007) Br Poult Sci , vol.48 , pp. 162-166
    • Saini, M.1
  • 32
    • 34047263949 scopus 로고    scopus 로고
    • Technical note: Detection of chicken, turkey, duck, and goose tissues in feedstuffs using species-specific polymerase chain reaction
    • Martín, I. et al. Technical note: detection of chicken, turkey, duck, and goose tissues in feedstuffs using species-specific polymerase chain reaction. J Anim Sci 85, 452-8 (2007).
    • (2007) J Anim Sci , vol.85 , pp. 452-458
    • Martín, I.1
  • 33
    • 33947384102 scopus 로고    scopus 로고
    • Molecular diagnostics of economically important Ceratitis fruit fly species (Diptera: Tephritidae) in Africa using PCR and RFLP analyses
    • Barr, N. B. et al.Molecular diagnostics of economically important Ceratitis fruit fly species (Diptera: Tephritidae) in Africa using PCR and RFLP analyses. Bull Entomol Res 96, 505-21 (2006).
    • (2006) Bull Entomol Res , vol.96 , pp. 505-521
    • Barr, N.B.1
  • 34
    • 34548130765 scopus 로고    scopus 로고
    • Two universal primer sets for species identification among vertebrates
    • Kitano, T., Umetsu, K., Tian, W. & Osawa, M. Two universal primer sets for species identification among vertebrates. Int J Legal Med 121, 423-7 (2007).
    • (2007) Int J Legal Med , vol.121 , pp. 423-427
    • Kitano, T.1    Umetsu, K.2    Tian, W.3    Osawa, M.4
  • 35
    • 26444524513 scopus 로고    scopus 로고
    • Mitochondrial DNA sequences from dried snake venom: A DNA barcoding approach to the identification of venom samples
    • Pook, C. E. & McEwing, R. Mitochondrial DNA sequences from dried snake venom: a DNA barcoding approach to the identification of venom samples. Toxicon 46, 711-5 (2005).
    • (2005) Toxicon , vol.46 , pp. 711-715
    • Pook, C.E.1    McEwing, R.2
  • 36
    • 4544326267 scopus 로고    scopus 로고
    • Rapid detection of cows' milk in sheeps' and goats' milk by a species-specific polymerase chain reaction technique
    • López-Calleja, I. et al. Rapid detection of cows' milk in sheeps' and goats' milk by a species-specific polymerase chain reaction technique. J Dairy Sci 87, 2839-45 (2004).
    • (2004) J Dairy Sci , vol.87 , pp. 2839-2845
    • López-Calleja, I.1
  • 37
    • 0035527366 scopus 로고    scopus 로고
    • mtDNA ribosomal gene phylogeny of sea hares in the genus Aplysia (Gastropoda, Opisthobranchia, Anaspidea): Implications for comparative neurobiology
    • Medina, M., Collins, T. M. & Walsh, P. J.mtDNA ribosomal gene phylogeny of sea hares in the genus Aplysia (Gastropoda, Opisthobranchia, Anaspidea): implications for comparative neurobiology. Syst Biol 50, 676-88 (2001).
    • (2001) Syst Biol , vol.50 , pp. 676-688
    • Medina, M.1    Collins, T.M.2    Walsh, P.J.3
  • 38
    • 0032044087 scopus 로고    scopus 로고
    • Phylogenetic relationships of the western North American phoxinins (Actinopterygii: Cyprinidae) as inferred from mitochondrial 12S and 16S ribosomal RNA sequences
    • Simons, A. M. & Mayden, R. L. Phylogenetic relationships of the western North American phoxinins (Actinopterygii: Cyprinidae) as inferred from mitochondrial 12S and 16S ribosomal RNA sequences. Mol Phylogenet Evol 9, 308-29 (1998).
    • (1998) Mol Phylogenet Evol , vol.9 , pp. 308-329
    • Simons, A.M.1    Mayden, R.L.2
  • 39
    • 0028703510 scopus 로고
    • Phylogenetic relationships of bears (the Ursidae) inferred from mitochondrial DNA sequences
    • Zhang, Y. P. & Ryder, O. A. Phylogenetic relationships of bears (the Ursidae) inferred from mitochondrial DNA sequences. Mol Phylogenet Evol 3, 351-9 (1994).
    • (1994) Mol Phylogenet Evol , vol.3 , pp. 351-359
    • Zhang, Y.P.1    Ryder, O.A.2
  • 40
    • 36949009434 scopus 로고    scopus 로고
    • Routine forensic use of the mitochondrial 12S ribosomal RNA gene for species identification
    • Melton, T. & Holland, C. Routine forensic use of the mitochondrial 12S ribosomal RNA gene for species identification. J Forensic Sci 52, 1305-7 (2007).
    • (2007) J Forensic Sci , vol.52 , pp. 1305-1307
    • Melton, T.1    Holland, C.2
  • 41
    • 33846414690 scopus 로고    scopus 로고
    • Molecular markers for some small mammals of southern Africa
    • Meyer, J., Kohnen, A., Harf, R., Froscheke, G. & Brandl, R. Molecular markers for some small mammals of southern Africa. Folia Zool 55, 444-447 (2006).
    • (2006) Folia Zool , vol.55 , pp. 444-447
    • Meyer, J.1    Kohnen, A.2    Harf, R.3    Froscheke, G.4    Brandl, R.5
  • 42
    • 0027414654 scopus 로고
    • Intraspecific DNA sequence variation of the mitochondrial control region of white sturgeon (Acipenser transmontanus)
    • Brown, J. R., Beckenbach, A. T. & Smith, M. J. Intraspecific DNA sequence variation of the mitochondrial control region of white sturgeon (Acipenser transmontanus). Mol Biol Evol 10, 326-41 (1993).
    • (1993) Mol Biol Evol , vol.10 , pp. 326-341
    • Brown, J.R.1    Beckenbach, A.T.2    Smith, M.J.3
  • 43
    • 0030813676 scopus 로고    scopus 로고
    • Population Genetics and Disease Susceptibility: Characterization of Central European Haplogroups By mtDNA Gene Mutations, Correlation with D Loop Variants and Association With Disease
    • Hofmann, S. et al. Population Genetics and Disease Susceptibility: Characterization of Central European Haplogroups By mtDNA Gene Mutations, Correlation with D Loop Variants and Association With Disease. Hum Mol Genet 6, 1835-46 (1997).
    • (1997) Hum Mol Genet , vol.6 , pp. 1835-1846
    • Hofmann, S.1


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