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Volumn 57, Issue 10, 2014, Pages 973-981

Identification of Ebola virus microRNAs and their putative pathological function

Author keywords

Ebola virus; function; microRNA

Indexed keywords

BIOLOGICAL MARKER; DEAD BOX PROTEIN; DICER1 PROTEIN, HUMAN; LUCIFERASE; MICRORNA; RIBONUCLEASE III; VIRUS RNA;

EID: 84921936548     PISSN: 16747305     EISSN: 18691889     Source Type: Journal    
DOI: 10.1007/s11427-014-4759-2     Document Type: Article
Times cited : (46)

References (43)
  • 1
    • 79952363727 scopus 로고    scopus 로고
    • Ebola haemorrhagic fever
    • PID: 21084112
    • Feldmann H, Geisbert TW. Ebola haemorrhagic fever. Lancet, 2011, 377: 849–862
    • (2011) Lancet , vol.377 , pp. 849-862
    • Feldmann, H.1    Geisbert, T.W.2
  • 3
    • 84903443426 scopus 로고    scopus 로고
    • Ebola viral disease outbreak-West Africa, 2014
    • PID: 24964881
    • Dixon MG, Schafer IJ. Ebola viral disease outbreak-West Africa, 2014. MMWR Morb Mortal Wkly Rep, 2014, 63: 548–551
    • (2014) MMWR Morb Mortal Wkly Rep , vol.63 , pp. 548-551
    • Dixon, M.G.1    Schafer, I.J.2
  • 4
    • 84921429134 scopus 로고    scopus 로고
    • Ebola: the virus and the disease. Wkly Epidemiol Rec, 1999, 74: 89
    • Ebola: the virus and the disease. Wkly Epidemiol Rec, 1999, 74: 89
  • 5
    • 84906726492 scopus 로고    scopus 로고
    • Ebola virus disease: an emerging threat
    • PID: 25140950
    • Turner C. Ebola virus disease: an emerging threat. Nursing, 2014, 44: 68–69
    • (2014) Nursing , vol.44 , pp. 68-69
    • Turner, C.1
  • 6
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: genomics, biogenesis, mechanism, and function
    • PID: 14744438, COI: 1:CAS:528:DC%2BD2cXhtVals7o%3D
    • Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell, 2004, 116: 281–297
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 7
    • 4644309196 scopus 로고    scopus 로고
    • The functions of animal microRNAs
    • PID: 15372042, COI: 1:CAS:528:DC%2BD2cXnsFaiu7g%3D
    • Ambros V. The functions of animal microRNAs. Nature, 2004, 431: 350–355
    • (2004) Nature , vol.431 , pp. 350-355
    • Ambros, V.1
  • 8
    • 3042767202 scopus 로고    scopus 로고
    • MicroRNAs: small RNAs with a big role in gene regulation
    • PID: 15211354, COI: 1:CAS:528:DC%2BD2cXltVSmsbw%3D
    • He L, Hannon GJ. MicroRNAs: small RNAs with a big role in gene regulation. Nat Rev Genet, 2004, 5: 522–531
    • (2004) Nat Rev Genet , vol.5 , pp. 522-531
    • He, L.1    Hannon, G.J.2
  • 9
    • 33745249539 scopus 로고    scopus 로고
    • Viruses and microRNAs
    • PID: 16736021, COI: 1:CAS:528:DC%2BD28XltVOmt7Y%3D
    • Cullen BR. Viruses and microRNAs. Nat Genet, 2006, 38(Suppl): S25–30
    • (2006) Nat Genet , vol.38 , pp. S25-S30
    • Cullen, B.R.1
  • 10
    • 79952070466 scopus 로고    scopus 로고
    • Virus-encoded microRNAs
    • PID: 21277611, COI: 1:CAS:528:DC%2BC3MXjs1Gqu7c%3D
    • Grundhoff A, Sullivan CS. Virus-encoded microRNAs. Virology, 2011, 411: 325–343
    • (2011) Virology , vol.411 , pp. 325-343
    • Grundhoff, A.1    Sullivan, C.S.2
  • 11
    • 84872021739 scopus 로고    scopus 로고
    • Virus-encoded microRNAs: an overview and a look to the future
    • PID: 23308061, COI: 1:CAS:528:DC%2BC3sXksVOmsg%3D%3D
    • Kincaid RP, Sullivan CS. Virus-encoded microRNAs: an overview and a look to the future. PLoS Pathog, 2012, 8: e1003018
    • (2012) PLoS Pathog , vol.8 , pp. e1003018
    • Kincaid, R.P.1    Sullivan, C.S.2
  • 13
    • 17244375710 scopus 로고    scopus 로고
    • Kaposi’s sarcoma-associated herpesvirus expresses an array of viral microRNAs in latently infected cells
    • PID: 15800047, COI: 1:CAS:528:DC%2BD2MXjslaqt7s%3D
    • Cai X, Lu S, Zhang Z, Gonzalez CM, Damania B, Cullen BR. Kaposi’s sarcoma-associated herpesvirus expresses an array of viral microRNAs in latently infected cells. Proc Natl Acad Sci USA, 2005, 102: 5570–5575
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 5570-5575
    • Cai, X.1    Lu, S.2    Zhang, Z.3    Gonzalez, C.M.4    Damania, B.5    Cullen, B.R.6
  • 14
    • 21644438873 scopus 로고    scopus 로고
    • Cloning and identification of a microRNA cluster within the latency-associated region of kaposi’s sarcoma-associated herpesvirus
    • PID: 15994824, COI: 1:CAS:528:DC%2BD2MXmtFOjtL8%3D
    • Samols MA, Hu J, Skalsky RL, Renne R. Cloning and identification of a microRNA cluster within the latency-associated region of kaposi’s sarcoma-associated herpesvirus. J Virol, 2005, 79: 9301–9305
    • (2005) J Virol , vol.79 , pp. 9301-9305
    • Samols, M.A.1    Hu, J.2    Skalsky, R.L.3    Renne, R.4
  • 16
    • 20444446357 scopus 로고    scopus 로고
    • SV40-encoded microRNAs regulate viral gene expression and reduce susceptibility to cytotoxic T cells
    • PID: 15931223, COI: 1:CAS:528:DC%2BD2MXks1Ogtb8%3D
    • Sullivan CS, Grundhoff AT, Tevethia S, Pipas JM, Ganem D. SV40-encoded microRNAs regulate viral gene expression and reduce susceptibility to cytotoxic T cells. Nature, 2005, 435: 682–686
    • (2005) Nature , vol.435 , pp. 682-686
    • Sullivan, C.S.1    Grundhoff, A.T.2    Tevethia, S.3    Pipas, J.M.4    Ganem, D.5
  • 17
    • 33646745146 scopus 로고    scopus 로고
    • Prediction and identification of herpes simplex virus 1-encoded microRNAs
    • PID: 16699030, COI: 1:CAS:528:DC%2BD28XlsVGnuro%3D
    • Cui C, Griffiths A, Li G, Silva LM, Kramer MF, Gaasterland T, Wang XJ, Coen DM. Prediction and identification of herpes simplex virus 1-encoded microRNAs. J Virol, 2006, 80: 5499–5508
    • (2006) J Virol , vol.80 , pp. 5499-5508
    • Cui, C.1    Griffiths, A.2    Li, G.3    Silva, L.M.4    Kramer, M.F.5    Gaasterland, T.6    Wang, X.J.7    Coen, D.M.8
  • 18
    • 0347755643 scopus 로고    scopus 로고
    • The microRNA registry
    • PID: 14681370, COI: 1:CAS:528:DC%2BD3sXhtVSrur%2FO
    • Griffiths-Jones S. The microRNA registry. Nucleic Acids Res, 2004, 32: D109–111
    • (2004) Nucleic Acids Res , vol.32 , pp. D109-D111
    • Griffiths-Jones, S.1
  • 20
    • 84904154899 scopus 로고    scopus 로고
    • Identification and validation of a novel microRNA-like molecule derived from a cytoplasmic RNA virus antigenome by bioinformatics and experimental approaches
    • PID: 24981144
    • Shi JD, Duan ZQ, Sun J, Wu MN, Wang B, Zhang J, Wang HX, Hu NZ, Hu YZ. Identification and validation of a novel microRNA-like molecule derived from a cytoplasmic RNA virus antigenome by bioinformatics and experimental approaches. Virol J, 2014, 11: 121
    • (2014) Virol J , vol.11 , pp. 121
    • Shi, J.D.1    Duan, Z.Q.2    Sun, J.3    Wu, M.N.4    Wang, B.5    Zhang, J.6    Wang, H.X.7    Hu, N.Z.8    Hu, Y.Z.9
  • 21
    • 78650431139 scopus 로고    scopus 로고
    • Functional microRNA generated from a cytoplasmic RNA virus
    • PID: 20705652, COI: 1:CAS:528:DC%2BC3cXhsFGrsrnO
    • Rouha H, Thurner C, Mandl CW. Functional microRNA generated from a cytoplasmic RNA virus. Nucleic Acids Res, 2010, 38: 8328–8337
    • (2010) Nucleic Acids Res , vol.38 , pp. 8328-8337
    • Rouha, H.1    Thurner, C.2    Mandl, C.W.3
  • 23
    • 78149316877 scopus 로고    scopus 로고
    • Noncanonical cytoplasmic processing of viral microRNAs
    • PID: 20841420, COI: 1:CAS:528:DC%2BC3cXhsVGhsL7L
    • Shapiro JS, Varble A, Pham AM, Tenoever BR. Noncanonical cytoplasmic processing of viral microRNAs. RNA, 2010, 16: 2068–2074
    • (2010) RNA , vol.16 , pp. 2068-2074
    • Shapiro, J.S.1    Varble, A.2    Pham, A.M.3    Tenoever, B.R.4
  • 24
    • 79954479030 scopus 로고    scopus 로고
    • Implications of RNA virus-produced miRNAs
    • PID: 21593582, COI: 1:CAS:528:DC%2BC3MXhs1eku7jP
    • Varble A, ten Oever BR. Implications of RNA virus-produced miRNAs. RNA Biol, 2011, 8: 190–194
    • (2011) RNA Biol , vol.8 , pp. 190-194
    • Varble, A.1    ten Oever, B.R.2
  • 25
    • 84878634311 scopus 로고    scopus 로고
    • Cytoplasmic RNA viruses as potential vehicles for the delivery of therapeutic small RNAs
    • PID: 23759022, COI: 1:CAS:528:DC%2BC3sXhtV2jsLzI
    • Usme-Ciro JA, Campillo-Pedroza N, Almazan F, Gallego-Gomez JC. Cytoplasmic RNA viruses as potential vehicles for the delivery of therapeutic small RNAs. Virol J, 2013, 10: 185
    • (2013) Virol J , vol.10 , pp. 185
    • Usme-Ciro, J.A.1    Campillo-Pedroza, N.2    Almazan, F.3    Gallego-Gomez, J.C.4
  • 26
    • 84899068179 scopus 로고    scopus 로고
    • A novel HIV-1-encoded microRNA enhances its viral replication by targeting the TATA box region
    • PID: 24620741, COI: 1:CAS:528:DC%2BC2cXhs1WrtrrE
    • Zhang Y, Fan M, Geng G, Liu B, Huang Z, Luo H, Zhou J, Guo X, Cai W, Zhang H. A novel HIV-1-encoded microRNA enhances its viral replication by targeting the TATA box region. Retrovirology, 2014, 11: 23
    • (2014) Retrovirology , vol.11 , pp. 23
    • Zhang, Y.1    Fan, M.2    Geng, G.3    Liu, B.4    Huang, Z.5    Luo, H.6    Zhou, J.7    Guo, X.8    Cai, W.9    Zhang, H.10
  • 27
    • 59949100896 scopus 로고    scopus 로고
    • HIV-1 genome-encoded hiv1-mir-H1 impairs cellular responses to infection
    • PID: 19082544, COI: 1:CAS:528:DC%2BD1MXhsV2jtro%3D
    • Kaul D, Ahlawat A, Gupta SD. HIV-1 genome-encoded hiv1-mir-H1 impairs cellular responses to infection. Mol Cell Biochem, 2009, 323: 143–148
    • (2009) Mol Cell Biochem , vol.323 , pp. 143-148
    • Kaul, D.1    Ahlawat, A.2    Gupta, S.D.3
  • 28
    • 84857377657 scopus 로고    scopus 로고
    • RNA virus microRNA that mimics a B-cell oncomiR
    • PID: 22308400, COI: 1:CAS:528:DC%2BC38Xjs1WmtLo%3D
    • Kincaid RP, Burke JM, Sullivan CS. RNA virus microRNA that mimics a B-cell oncomiR. Proc Natl Acad Sci USA, 2012, 109: 3077–3082
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 3077-3082
    • Kincaid, R.P.1    Burke, J.M.2    Sullivan, C.S.3
  • 30
    • 84858421932 scopus 로고    scopus 로고
    • West Nile virus encodes a microRNA-like small RNA in the 3′ untranslated region which up-regulates GATA4 mRNA and facilitates virus replication in mosquito cells
    • PID: 22080551, COI: 1:CAS:528:DC%2BC38Xkt1Crsr8%3D
    • Hussain M, Torres S, Schnettler E, Funk A, Grundhoff A, Pijlman GP, Khromykh AA, Asgari S. West Nile virus encodes a microRNA-like small RNA in the 3′ untranslated region which up-regulates GATA4 mRNA and facilitates virus replication in mosquito cells. Nucleic Acids Res, 2012, 40: 2210–2223
    • (2012) Nucleic Acids Res , vol.40 , pp. 2210-2223
    • Hussain, M.1    Torres, S.2    Schnettler, E.3    Funk, A.4    Grundhoff, A.5    Pijlman, G.P.6    Khromykh, A.A.7    Asgari, S.8
  • 31
    • 84894328203 scopus 로고    scopus 로고
    • MicroRNA-like viral small RNA from dengue virus 2 autoregulates its replication in mosquito cells
    • PID: 24550303, COI: 1:CAS:528:DC%2BC2cXivFansL4%3D
    • Hussain M, Asgari S. MicroRNA-like viral small RNA from dengue virus 2 autoregulates its replication in mosquito cells. Proc Natl Acad Sci USA, 2014, 111: 2746–2751
    • (2014) Proc Natl Acad Sci USA , vol.111 , pp. 2746-2751
    • Hussain, M.1    Asgari, S.2
  • 32
    • 38549083644 scopus 로고    scopus 로고
    • Vir-Mir db: prediction of viral microrna candidate hairpins
    • PID: 17702763, COI: 1:CAS:528:DC%2BD1cXhtVSquro%3D
    • Li SC, Shiau CK, Lin WC. Vir-Mir db: prediction of viral microrna candidate hairpins. Nucleic Acids Res, 2008, 36: D184–189
    • (2008) Nucleic Acids Res , vol.36 , pp. D184-D189
    • Li, S.C.1    Shiau, C.K.2    Lin, W.C.3
  • 33
    • 34547596338 scopus 로고    scopus 로고
    • MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features
    • PID: 17553836
    • Jiang P, Wu H, Wang W, Ma W, Sun X, Lu Z. MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features. Nucleic Acids Res, 2007, 35: W339–344
    • (2007) Nucleic Acids Res , vol.35 , pp. W339-W344
    • Jiang, P.1    Wu, H.2    Wang, W.3    Ma, W.4    Sun, X.5    Lu, Z.6
  • 34
    • 77957818081 scopus 로고    scopus 로고
    • MatureBayes: a probabilistic algorithm for identifying the mature miRNA within novel precursors
    • PID: 20700506
    • Gkirtzou K, Tsamardinos I, Tsakalides P, Poirazi P. MatureBayes: a probabilistic algorithm for identifying the mature miRNA within novel precursors. PLoS One, 2010, 5: e11843
    • (2010) PLoS One , vol.5 , pp. e11843
    • Gkirtzou, K.1    Tsamardinos, I.2    Tsakalides, P.3    Poirazi, P.4
  • 35
    • 84921935866 scopus 로고    scopus 로고
    • Bayes-SVM-MiRNA web server v1.0
    • Bayes-SVM-MiRNA web server v1.0. http://wotan.Wistar.Upenn.Edu/bayessvmmirna find/
  • 36
    • 58149112225 scopus 로고    scopus 로고
    • Merkel cell polyomavirus encodes a microRNA with the ability to autoregulate viral gene expression
    • PID: 19046593, COI: 1:CAS:528:DC%2BD1MXktlKhug%3D%3D
    • Seo GJ, Chen CJ, Sullivan CS. Merkel cell polyomavirus encodes a microRNA with the ability to autoregulate viral gene expression. Virology, 2009, 383: 183–187
    • (2009) Virology , vol.383 , pp. 183-187
    • Seo, G.J.1    Chen, C.J.2    Sullivan, C.S.3
  • 37
  • 38
    • 4644237189 scopus 로고    scopus 로고
    • Fast and effective prediction of microRNA/target duplexes
    • PID: 15383676, COI: 1:CAS:528:DC%2BD2cXotFyqu7o%3D
    • Rehmsmeier M, Steffen P, Hochsmann M, Giegerich R. Fast and effective prediction of microRNA/target duplexes. RNA, 2004, 10: 1507–1517
    • (2004) RNA , vol.10 , pp. 1507-1517
    • Rehmsmeier, M.1    Steffen, P.2    Hochsmann, M.3    Giegerich, R.4
  • 39
    • 33745239258 scopus 로고    scopus 로고
    • Approaches to microRNA discovery
    • PID: 16736019, COI: 1:CAS:528:DC%2BD28XltVOmt7c%3D
    • Berezikov E, Cuppen E, Plasterk RH. Approaches to microRNA discovery. Nat Genet, 2006, 38(Suppl): S2–7
    • (2006) Nat Genet , vol.38 , pp. S2-S7
    • Berezikov, E.1    Cuppen, E.2    Plasterk, R.H.3
  • 40
    • 77956915143 scopus 로고    scopus 로고
    • Discovering microRNAs from Bombyx mori nucleopolyhedrosis virus
    • PID: 20800868, COI: 1:CAS:528:DC%2BC3cXht1Wju7vL
    • Singh J, Singh CP, Bhavani A, Nagaraju J. Discovering microRNAs from Bombyx mori nucleopolyhedrosis virus. Virology, 2010, 407: 120–128
    • (2010) Virology , vol.407 , pp. 120-128
    • Singh, J.1    Singh, C.P.2    Bhavani, A.3    Nagaraju, J.4
  • 41
    • 50949097481 scopus 로고    scopus 로고
    • An insect virus-encoded microRNA regulates viral replication
    • PID: 18614632, COI: 1:CAS:528:DC%2BD1cXhtVyktbrE
    • Hussain M, Taft RJ, Asgari S. An insect virus-encoded microRNA regulates viral replication. J Virol, 2008, 82: 9164–9170
    • (2008) J Virol , vol.82 , pp. 9164-9170
    • Hussain, M.1    Taft, R.J.2    Asgari, S.3
  • 42
    • 63149129264 scopus 로고    scopus 로고
    • Discovery of herpes B virus-encoded microRNAs
    • PID: 19144716, COI: 1:CAS:528:DC%2BD1MXjs1Wrtbg%3D
    • Besecker MI, Harden ME, Li G, Wang XJ, Griffiths A. Discovery of herpes B virus-encoded microRNAs. J Virol, 2009, 83: 3413–3416
    • (2009) J Virol , vol.83 , pp. 3413-3416
    • Besecker, M.I.1    Harden, M.E.2    Li, G.3    Wang, X.J.4    Griffiths, A.5
  • 43
    • 84901068339 scopus 로고    scopus 로고
    • Characterization of host immune responses in Ebola virus infections
    • PID: 24742338, COI: 1:CAS:528:DC%2BC2cXotVeksb8%3D
    • Wong G, Kobinger GP, Qiu X. Characterization of host immune responses in Ebola virus infections. Expert Rev Clin Immunol, 2014, 10: 781–790
    • (2014) Expert Rev Clin Immunol , vol.10 , pp. 781-790
    • Wong, G.1    Kobinger, G.P.2    Qiu, X.3


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