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Volumn 1262, Issue , 2015, Pages 3-19

Visualization of lncRNA by single-molecule fluorescence in situ hybridization

Author keywords

Fluorescence in situ hybridization; lncRNA; Noncoding RNA; Single cell; Single molecule RNA FISH

Indexed keywords

GLUCOSE OXIDASE; LONG UNTRANSLATED RNA; OLIGONUCLEOTIDE PROBE;

EID: 84921801172     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-2253-6_1     Document Type: Article
Times cited : (65)

References (25)
  • 1
    • 84879987789 scopus 로고    scopus 로고
    • Bartel DP (2013) lincRNAs: Genomics, evolution, and mechanisms
    • Ulitsky I, Bartel DP (2013) lincRNAs: genomics, evolution, and mechanisms. Cell 154:26–46
    • Cell , vol.154 , pp. 26-46
    • Ulitsky, I.1
  • 2
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn JL, Chang HY (2012) Genome regulation by long noncoding RNAs. Annu Rev Biochem 81:145–166
    • (2012) Annu Rev Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 3
    • 84875590101 scopus 로고    scopus 로고
    • Long noncoding RNAs: Past, present, and future
    • Kung JT, Colognori D, Lee JT (2013) Long noncoding RNAs: past, present, and future. Genetics 193:651–669
    • (2013) Genetics , vol.193 , pp. 651-669
    • Kung, J.T.1    Colognori, D.2    Lee, J.T.3
  • 4
    • 60349120914 scopus 로고    scopus 로고
    • Long non-coding RNAs: Insights into functions
    • Mercer TR, Dinger ME, Mattick JS (2009) Long non-coding RNAs: insights into functions. Nat Rev Genet 10:155–159
    • (2009) Nat Rev Genet , vol.10 , pp. 155-159
    • Mercer, T.R.1    Dinger, M.E.2    Mattick, J.S.3
  • 5
    • 0015876484 scopus 로고
    • Localisation of cellular globin messenger RNA by in situ hybridisation to complementary DNA
    • Harrison PR, Conkie D, Paul J, Jones K (1973) Localisation of cellular globin messenger RNA by in situ hybridisation to complementary DNA. FEBS Lett 32:109–112
    • (1973) FEBS Lett , vol.32 , pp. 109-112
    • Harrison, P.R.1    Conkie, D.2    Paul, J.3    Jones, K.4
  • 6
    • 0003619612 scopus 로고
    • Actin gene expression visualized in chicken muscle tissue culture by using in situ hybridization with a biotinated nucleotide analog
    • Singer RH, Ward DC (1982) Actin gene expression visualized in chicken muscle tissue culture by using in situ hybridization with a biotinated nucleotide analog. Proc Natl Acad Sci U S A 79:7331–7335
    • (1982) Proc Natl Acad Sci U S A , vol.79 , pp. 7331-7335
    • Singer, R.H.1    Ward, D.C.2
  • 7
    • 0026456701 scopus 로고
    • The human XIST gene: Analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus
    • Brown CJ, Hendrich BD, Rupert JL, Lafreniere RG, Xing Y, Lawrence J, Willard HF (1992) The human XIST gene: analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus. Cell 71:527–542
    • (1992) Cell , vol.71 , pp. 527-542
    • Brown, C.J.1    Hendrich, B.D.2    Rupert, J.L.3    Lafreniere, R.G.4    Xing, Y.5    Lawrence, J.6    Willard, H.F.7
  • 8
    • 0030034051 scopus 로고    scopus 로고
    • XIST RNA paints the inactive X chromosome at interphase: Evidence for a novel RNA involved in nuclear/chromosome structure
    • Clemson CM, McNeil JA, Willard HF, Lawrence JB (1996) XIST RNA paints the inactive X chromosome at interphase: evidence for a novel RNA involved in nuclear/chromosome structure. J Cell Biol 132:259–275
    • (1996) J Cell Biol , vol.132 , pp. 259-275
    • Clemson, C.M.1    McNeil, J.A.2    Willard, H.F.3    Lawrence, J.B.4
  • 9
  • 11
    • 84855956560 scopus 로고    scopus 로고
    • Long non-coding RNAs in nuclear bodies
    • Ip JY, Nakagawa S (2012) Long non-coding RNAs in nuclear bodies. Dev Growth Differ 54:44–54
    • (2012) Dev Growth Differ , vol.54 , pp. 44-54
    • Ip, J.Y.1    Nakagawa, S.2
  • 12
    • 62449319486 scopus 로고    scopus 로고
    • MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles
    • Sasaki YT, Ideue T, Sano M, Mituyama T, Hirose T (2009) MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles. Proc Natl Acad Sci U S A 106:2525–2530
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 2525-2530
    • Sasaki, Y.T.1    Ideue, T.2    Sano, M.3    Mituyama, T.4    Hirose, T.5
  • 13
    • 34548291568 scopus 로고    scopus 로고
    • The mRNA-like noncoding RNA Gomafu constitutes a novel nuclear domain in a subset of neurons
    • Sone M, Hayashi T, Tarui H, Agata K, Takeichi M, Nakagawa S (2007) The mRNA-like noncoding RNA Gomafu constitutes a novel nuclear domain in a subset of neurons. J Cell Sci 120:2498–2506
    • (2007) J Cell Sci , vol.120 , pp. 2498-2506
    • Sone, M.1    Hayashi, T.2    Tarui, H.3    Agata, K.4    Takeichi, M.5    Nakagawa, S.6
  • 14
    • 0032562720 scopus 로고    scopus 로고
    • Visualization of single RNA transcripts in situ
    • Femino AM, Fay FS, Fogarty K, Singer RH (1998) Visualization of single RNA transcripts in situ. Science 280:585–590
    • (1998) Science , vol.280 , pp. 585-590
    • Femino, A.M.1    Fay, F.S.2    Fogarty, K.3    Singer, R.H.4
  • 16
    • 84857395611 scopus 로고    scopus 로고
    • Single-cell analysis reveals that noncoding RNAs contribute to clonal heterogeneity by modulating transcription factor recruitment
    • Bumgarner SL, Neuert G, Voight BF, Symbor-Nagrabska A, GrisafiP, van Oudenaarden A, Fink GR (2012) Single-cell analysis reveals that noncoding RNAs contribute to clonal heterogeneity by modulating transcription factor recruitment. Mol Cell 45: 470–482
    • (2012) Mol Cell , vol.45 , pp. 470-482
    • Bumgarner, S.L.1    Neuert, G.2    Voight, B.F.3    Symbor-Nagrabska, A.4    Grisafi, P.5    Van Oudenaarden, A.6    Fink, G.R.7
  • 21
    • 84878871969 scopus 로고    scopus 로고
    • Raj A (2013) linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis
    • Maamar H, Cabili MN, Rinn J, Raj A (2013) linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis. Genes Dev 27:1260–1271
    • Genes Dev , vol.27 , pp. 1260-1271
    • Maamar, H.1    Cabili, M.N.2    Rinn, J.3
  • 22
    • 44349115087 scopus 로고    scopus 로고
    • Kcnq1ot1/Lit1 noncoding RNA mediates transcriptional silencing by targeting to the perinucleolar region
    • Mohammad F, Pandey RR, Nagano T, Chakalova L, Mondal T, Fraser P, Kanduri C (2008) Kcnq1ot1/Lit1 noncoding RNA mediates transcriptional silencing by targeting to the perinucleolar region. Mol Cell Biol 28:3713–3728
    • (2008) Mol Cell Biol , vol.28 , pp. 3713-3728
    • Mohammad, F.1    Pandey, R.R.2    Nagano, T.3    Chakalova, L.4    Mondal, T.5    Fraser, P.6    Kanduri, C.7
  • 24
    • 77957069138 scopus 로고    scopus 로고
    • Detection of individual endogenous RNA transcripts in situ using multiple singly labeled probes
    • Raj A, Tyagi S (2010) Detection of individual endogenous RNA transcripts in situ using multiple singly labeled probes. Methods Enzymol 472:365–386
    • (2010) Methods Enzymol , vol.472 , pp. 365-386
    • Raj, A.1    Tyagi, S.2
  • 25
    • 84874665433 scopus 로고    scopus 로고
    • Single chromosome transcriptional profiling reveals chromosomelevel regulation of gene expression
    • Levesque MJ, Raj A (2013) Single chromosome transcriptional profiling reveals chromosomelevel regulation of gene expression. Nat Methods 10:246. doi:10.1038/nmeth.2372
    • (2013) Nat Methods , vol.10 , pp. 246
    • Levesque, M.J.1    Raj, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.