Novel staphylococcal species that form part of a Staphylococcus aureus-related complex: the non-pigmented Staphylococcus argenteus sp. nov. and the non-human primate-associated Staphylococcus schweitzeri sp. nov

International Journal of Systematic and Evolutionary Microbiology

Volumn 65, Issue 1, 2015, Pages 15-22

  Tong, Steven Y C ^a,b   Schaumburg, Frieder ^c   Ellington, Matthew J ^d   Corander, Jukka ^e   Pichon, Bruno ^d   Leendertz, Fabian ^f   Bentley, Stephen D ^b   Parkhill, Julian ^b   Holt, Deborah C ^a   Peters, Georg ^c   Giffard, Philip M ^a  

^a MENZIES SCHOOL OF HEALTH RESEARCH   (Australia)

^b WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^c UNIVERSITY HOSPITAL MÜNSTER   (Germany)

^d PUBLIC HEALTH ENGLAND   (United Kingdom)

^e UNIVERSITY OF HELSINKI   (Finland)

^f ROBERT KOCH INSTITUTE   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ALKALINE PHOSPHATASE; ARGININE DEIMINASE; ARYL ACYLAMIDASE; GALACTOSE; MALTOSE; MANNITOL; MANNOSE; N ACETYLGLUCOSAMINE; PHOSPHATASE; POLYMYXIN B; PYROGLUTAMIC ACID; RIBOSE; RNA 16S; SUCROSE; TREHALOSE; BACTERIAL DNA; FARNOQUINONE; FATTY ACID;

ARTICLE; BACTERIAL GENETICS; CONTROLLED STUDY; DNA DNA HYBRIDIZATION; GENE SEQUENCE; GENOME; GRAM STAINING; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PHENOTYPE; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS; STAPHYLOCOCCUS; STAPHYLOCOCCUS ARGENTEUS; STAPHYLOCOCCUS AUREUS; STAPHYLOCOCCUS LENTUS; STAPHYLOCOCCUS SCHWEITZERI; STAPHYLOCOCCUS SCIURI; ANIMAL; BACTERIUM IDENTIFICATION; CERCOPITHECUS; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; GENETICS; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEIC ACID HYBRIDIZATION; NUCLEOTIDE SEQUENCE; STAPHYLOCOCCUS INFECTION;

PRIMATES; STAPHYLOCOCCUS; STAPHYLOCOCCUS AUREUS;

ANIMALS; BACTERIAL TYPING TECHNIQUES; BASE SEQUENCE; CERCOPITHECUS; DNA, BACTERIAL; FATTY ACIDS; HUMANS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; STAPHYLOCOCCAL INFECTIONS; STAPHYLOCOCCUS; STAPHYLOCOCCUS AUREUS; VITAMIN K 2;

EID: 84921455097     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.062752-0     Document Type: Article

References (22)

1. Akobi, B., Aboderin, O., Sasaki, T. & Shittu, A. (2012). Characterization of Staphylococcus aureus isolates from faecal samples of the Straw-Coloured Fruit Bat (Eidolon helvum) in Obafemi Awolowo University (OAU), Nigeria. BMC Microbiol 12, 279.
2. Brakstad, O. G., Aasbakk, K. & Maeland, J. A. (1992). Detection of Staphylococcus aureus by polymerase chain reaction amplification of the nuc gene. J Clin Microbiol 30, 1654-1660.
3. Brennan, L., Lilliebridge, R. A., Cheng, A. C., Giffard, P. M., Currie, B. J. & Tong, S. Y. (2013). Community-associated meticillin-resistant Staphylococcus aureus carriage in hospitalized patients in tropical northern Australia. J Hosp Infect 83, 205-211.
4. Cheng, L., Connor, T. R., Sirén, J., Aanensen, D. M. & Corander, J. (2013). Hierarchical and spatially explicit clustering of DNA sequences with BAPS software. Mol Biol Evol 30, 1224-1228.
5. Goris, J., Konstantinidis, K. T., Klappenbach, J. A., Coenye, T., Vandamme, P. & Tiedje, J. M. (2007). DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. Int J Syst Evol Microbiol 57, 81-91.
6. Gotz, F., Bannerman, T. & Schleifer, K.-H. (2006). The genera Staphylococcus and Macrococcus. In The Prokaryotes, 3rd edn, Vol. 4 Bacteria: Firmicutes, Cyanobacteria, pp. 5-75. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York, NY: Springer.
7. Holt, D. C., Holden, M. T., Tong, S. Y., Castillo-Ramirez, S., Clarke, L., Quail, M. A., Currie, B. J., Parkhill, J., Bentley, S. D. & et al. (2011). A very early-branching Staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin. Genome Biol Evol 3, 881-895.
8. Jenney, A., Holt, D., Ritika, R., Southwell, P., Pravin, S., Buadromo, E., Carapetis, J., Tong, S. & Steer, A. (2014). The clinical and molecular epidemiology of Staphylococcus aureus infections in Fiji. BMC Infect Dis 14, 160.
9. Kloos, W. E., Schleifer, K. H. & Smith, R. F. (1976). Characterization of Staphylococcus sciuri sp. nov. and its subspecies. Int J Syst Bacteriol 26, 22-37.
10. McDonald, M., Dougall, A., Holt, D., Huygens, F., Oppedisano, F., Giffard, P. M., Inman-Bamber, J., Stephens, A. J., Towers, R. & et al. (2006). Use of a single-nucleotide polymorphism genotyping system to demonstrate the unique epidemiology of methicillinresistant Staphylococcus aureus in remote aboriginal communities. J Clin Microbiol 44, 3720-3727.
11. Meier-Kolthoff, J. P., Auch, A. F., Klenk, H. P. & Göker, M. (2013). Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics 14, 60.
12. Ng, J. W., Holt, D. C., Lilliebridge, R. A., Stephens, A. J., Huygens, F., Tong, S. Y., Currie, B. J. & Giffard, P. M. (2009). Phylogenetically distinct Staphylococcus aureus lineage prevalent among indigenous communities in northern Australia. J Clin Microbiol 47, 2295-2300.
13. Richter, M. & Rosselló-Móra, R. (2009). Shifting the genomic gold standard for the prokaryotic species definition. Proc Natl Acad Sci U S A 106, 19126-19131.
14. Ruimy, R., Angebault, C., Djossou, F., Dupont, C., Epelboin, L., Jarraud, S., Lefevre, L. A., Bes, M., Lixandru, B. E. & et al. (2010). Are host genetics the predominant determinant of persistent nasal Staphylococcus aureus carriage in humans? J Infect Dis 202, 924-934.
15. Schaumburg, F., Alabi, A. S., Köck, R., Mellmann, A., Kremsner, P. G., Boesch, C., Becker, K., Leendertz, F. H. & Peters, G. (2012). Highly divergent Staphylococcus aureus isolates from African nonhuman primates. Environ Microbiol Rep 4, 141-146.
16. Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
17. Schleifer, K. H., Geyer, U., Kilpper-Bälz, R. & Devriese, L. A. (1983). Elevation of Staphylococcus sciuri subsp. lentus (Kloos et al.) to species status: Staphylococcus lentus (Kloos et al.) comb. nov. Syst Appl Microbiol 4, 382-387.
18. Schumann, P. (2011). Peptidoglycan Structure. Methods Microbiol 38, 101-129.
19. Švec, P., Vancanneyt, M., Sedláček, I., Engelbeen, K., Štětina, V., Swings, J. & Petráš, P. (2004). Reclassification of Staphylococcus pulvereri Zakrzewska-Czerwińska et al. 1995 as a later synonym of Staphylococcus vitulinus Webster et al. 1994. Int J Syst Evol Microbiol 54, 2213-2215.
20. Tong, S. Y., Lilliebridge, R. A., Bishop, E. J., Cheng, A. C., Holt, D. C., McDonald, M. I., Giffard, P. M., Currie, B. J. & Boutlis, C. S. (2010). Clinical correlates of Panton-Valentine leukocidin (PVL), PVL isoforms, and clonal complex in the Staphylococcus aureus population of Northern Australia. J Infect Dis 202, 760-769.
21. Tong, S. Y., Sharma-Kuinkel, B. K., Thaden, J. T., Whitney, A. R., Yang, S. J., Mishra, N. N., Rude, T., Lilliebridge, R. A., Selim, M. A. & et al. (2013). Virulence of endemic nonpigmented northern Australian Staphylococcus aureus clone (clonal complex 75, S. argenteus) is not augmented by staphyloxanthin. J Infect Dis 208, 520-527.
22. Zakrzewska-Czerwińska, J., Gaszewska-Mastalarz, A., Lis, B., Gamian, A. & Mordarski, M. (1995). Staphylococcus pulvereri sp. nov., isolated from human and animal specimens. Int J Syst Bacteriol 45, 169-172.