A simple electrochemical biosensor for highly sensitive and specific detection of microRNA based on mismatched catalytic hairpin assembly

Biosensors and Bioelectronics

Volumn 68, Issue , 2015, Pages 343-349

  Zhang, Ye ^a   Yan, Yurong ^a   Chen, Wenhong ^b   Cheng, Wei ^c   Li, Shengqiang ^a   Ding, Xiaojuan ^a   Li, Dandan ^a   Wang, Hong ^a   Ju, Huangxian ^a,d   Ding, Shijia ^a  

^a CHONGQING MEDICAL UNIVERSITY   (China)

^b CHILDREN S HOSPITAL OF CHONGQING MEDICAL UNIVERSITY   (China)

^c THE FIRST AFFILIATED HOSPITAL OF CHONGQING MEDICAL UNIVERSITY   (China)

^d NANJING UNIVERSITY   (China)

Author keywords

Catalytic hairpin assembly; Differential pulse voltammetry; Electrochemical biosensor; MicroRNA; Mismatched base pairs

Indexed keywords

ASSEMBLY; BIOSENSORS; DIAGNOSIS; VOLTAMMETRY;

BACKGROUND SIGNALS; BASE PAIRS; BIOMEDICAL RESEARCH; CLINICAL DIAGNOSIS; DIFFERENTIAL PULSE VOLTAMMETRY; ELECTROCHEMICAL BIOSENSOR; MICRORNAS; OPTIMAL EXPERIMENTAL CONDITIONS;

RNA;

MICRORNA;

ARTICLE; BIOSENSOR; CONTROLLED STUDY; DIFFERENTIAL PULSE VOLTAMMETRY; ELECTROCHEMICAL BIOSENSOR; EQUIPMENT DESIGN; GENE IDENTIFICATION; GENE TARGETING; INTERMETHOD COMPARISON; MISMATCHED CATALYTIC HAIRPIN ASSEMBLY; MOLECULAR DYNAMICS; NUCLEIC ACID STRUCTURE, METABOLISM AND FUNCTION; PROCESS OPTIMIZATION; PRODUCT DEVELOPMENT; REPRODUCIBILITY; SENSITIVITY ANALYSIS; SENSITIVITY AND SPECIFICITY; VALIDITY; BASE MISPAIRING; DEVICES; ELECTROCHEMICAL ANALYSIS; EVALUATION STUDY; GENETIC PROCEDURES; GENETICS; HUMAN; LIMIT OF DETECTION;

BASE PAIR MISMATCH; BIOSENSING TECHNIQUES; ELECTROCHEMICAL TECHNIQUES; HUMANS; LIMIT OF DETECTION; MICRORNAS;

EID: 84921293904     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2015.01.026     Document Type: Article

References (38)

1. Bhadra S., Ellington A.D. Nucleic Acids Res. 2014, 42:e58.
2. Chowdhury D., Choi Y.E., Brault M.E. Nat. Rev. Mol. Cell Biol. 2013, 14:181-189.
3. Cullen B.R. Nature 2009, 457:421-425.
4. Cissell K.A., Deo S.K. Anal. Bioanal. Chem. 2009, 394:1109-1116.
5. Cash K.J., Heeger A.J., Plaxco K.W., Xiao Y. Anal. Chem. 2009, 81:656-661.
6. Chen X., Briggs N., McLain J.R., Ellington A.D. PANS 2013, 110:5386-5391.
7. Cheng W., Ding S.J., Li Q., Yu T.X., Yin Y.B., Ju H.X., Ren G.S. Biosens. Bioelectron. 2012, 36:12-17.
8. Duan R., Zuo X., Wang S., Quan X., Chen D., Chen Z., Jiang L., Fan C., Xia F. J. Am. Chem. Soc. 2013, 135:4604-4607.
9. Ge Z.L., Lin M.H., Wang P., Pei H., Yan J., Shi J.Y., Huang Q., He D.N., Fan C.H., Zuo X.L. Anal. Chem. 2014, 86:2124-2130.
10. Gangaraju V.K., Lin H. Nat. Rev. Mol. Cell Biol. 2009, 10:116-125.
11. Jiang Y.S., Bhadra S., Li B.L., Ellington A.D. Angew. Chem. Int. Ed. 2014, 126:1876-1879.
12. Koshiol J., Wang E., Zhao Y., Marincola F., Landi M.T. Cancer Epidemiol. Biomark. Prev. 2010, 19:907-911.
13. Lee I., Ajay S.S., Chen H., Maruyama A., Wang N., McInnis M.G., Athey B.D. Nucleic Acids Res. 2008, 36:e27.
14. Leshkowitz D., Horn-Saban S., Parmet Y., Feldmesser E. RNA 2013, 19:527-538.
15. Lao K., Xu N.L., Yeung V., Chen C., Livak K.J., Straus N.A. Biochem. Biophys. Res. Commun. 2006, 343:85-89.
16. Lagos-Quintana M., Rauhut R., Lendeckel W., Tuschl T. Science 2011, 294:853-858.
17. Lei J.P., Ju H.X. Chem. Soc. Rev. 2012, 41:2122-2134.
18. Liao Y.H., Huang R., Ma Z.K., Wu Y.X., Zhou X.M., Xing D. Anal. Chem. 2014, 86:4596-4604.
19. Liu S.F., Wang Y., Ming J.J., Lin Y., Cheng C.B., Li F. Biosens. Bioelectron. 2013, 49:472-477.
20. Liu G., Lee T.M.H., Wang J. J. Am. Chem. Soc. 2005, 127:38-39.
21. Li B.L., Jiang Y., Chen X., Ellington A.D. J. Am. Chem. Soc. 2012, 134:13918-13921.
22. Li B.L., Ellington A.D., Chen X. Nucleic Acids Res. 2011, 39:e110.
23. Li F.Y., Peng J., Wang J.J., Tang H., Tan L., Xie Q.J., Yao S.Z. Biosens. Bioelectron. 2014, 54:158-164.
24. Liu S.F., Wang C.F., Zhang C.X., Wang Y., Tang B. Anal. Chem. 2013, 84:2282-2288.
25. Markou A., Tsaroucha E.G., Kaklamanis L., Fotinou M., Georgoulias V., Lianidou E.S. Clin. Chem. 2008, 54:1696-1704.
26. Ma C., Wang W., Yang Q., Shi C., Cao L. Biosens. Bioelectron. 2011, 26:3309-3312.
27. Nicoloso M.S., Spizzo R., Shimizu M., Rossi S., Calin G.A. Nat. Rev. Cancer 2009, 9:293-302.
28. Pall G.S., Codony-Servat C., Byrne J., Ritchie L., Hamilton A. Nucleic Acids Res. 2007, 35:e60.
29. Qian H., He L. Anal. Chem. 2009, 81:4536-4542.
30. Shi R., Chiang V.L. Biotechniques 2005, 39:519-525.
31. Varallyay E., Burgyan J., Havelda Z. Nat. Protoc. 2008, 3:190-196.
32. Válóczi A., Hornyik C., Varga N., Burgyán J., Kauppinen S., Havelda Z. Nucleic Acids Res. 2004, 32:e175.
33. Wahlestedt C. Nat. Rev. Drug Discov. 2013, 12:433-440.
34. Yin P., Choi H.M.T., Calvert C.R., Pierce N.A. Nature 2008, 451:318-323.
35. Zhou Y., Huang Q., Gao J., Lu J., Shen X., Fan C. Nucleic Acids Res. 2010, 38:e156.
36. Zheng A.X., Wang J.R., Li J., Song X.R., Chen G.N., Yang H.H. Biosens. Bioelectron. 2012, 36:217-221.
37. Zheng A.X., Li J., Wang J.R., Song X.R., Chen G.N., Yang H.H. Chem. Commun. 2012, 48:3112-3114.
38. Zhu D., Yan Y.R., Lei P.H., Shen B., Cheng W., Ju H.X., Ding S.J. Anal. Chim. Acta 2014, 846:44-50.