메뉴 건너뛰기




Volumn 23, Issue 1, 2015, Pages 80-92

Molecular basis of histone tail recognition by human TIP5 PHD finger and bromodomain of the chromatin remodeling complex NoRC

Author keywords

[No Author keywords available]

Indexed keywords

BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2A; HISTONE H3; HISTONE H4; NUCLEOLAR REMODELING COMPLEX PROTEIN; TTF I INTERACTING PROTEIN 5; UNCLASSIFIED DRUG; ZINC FINGER PROTEIN; BAZ2A PROTEIN, HUMAN; HISTONE; NONHISTONE PROTEIN; PROTEIN BINDING;

EID: 84920986211     PISSN: 09692126     EISSN: 18784186     Source Type: Journal    
DOI: 10.1016/j.str.2014.10.017     Document Type: Article
Times cited : (57)

References (37)
  • 1
  • 2
    • 77952093047 scopus 로고    scopus 로고
    • Structural insights into selective histone H3 recognition by the human Polybromo bromodomain 2
    • Z. Charlop-Powers, L. Zeng, Q. Zhang, and M.M. Zhou Structural insights into selective histone H3 recognition by the human Polybromo bromodomain 2 Cell Res. 20 2010 529 538
    • (2010) Cell Res. , vol.20 , pp. 529-538
    • Charlop-Powers, Z.1    Zeng, L.2    Zhang, Q.3    Zhou, M.M.4
  • 4
    • 27944488680 scopus 로고    scopus 로고
    • Accurate prediction of protein disordered regions by mining protein structure data
    • J. Cheng, M. Sweredoski, and P. Baldi Accurate prediction of protein disordered regions by mining protein structure data Data Min. Knowl. Discov. 11 2005 213 222
    • (2005) Data Min. Knowl. Discov. , vol.11 , pp. 213-222
    • Cheng, J.1    Sweredoski, M.2    Baldi, P.3
  • 5
    • 84883743725 scopus 로고    scopus 로고
    • Structure of the p300 catalytic core and implications for chromatin targeting and HAT regulation
    • M. Delvecchio, J. Gaucher, C. Aguilar-Gurrieri, E. Ortega, and D. Panne Structure of the p300 catalytic core and implications for chromatin targeting and HAT regulation Nat. Struct. Mol. Biol. 20 2013 1040 1046
    • (2013) Nat. Struct. Mol. Biol. , vol.20 , pp. 1040-1046
    • Delvecchio, M.1    Gaucher, J.2    Aguilar-Gurrieri, C.3    Ortega, E.4    Panne, D.5
  • 6
    • 24044538903 scopus 로고    scopus 로고
    • IUPred: Web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content
    • Z. Dosztányi, V. Csizmók, P. Tompa, and I. Simon IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content Bioinformatics 21 2005 3433 3434
    • (2005) Bioinformatics , vol.21 , pp. 3433-3434
    • Dosztányi, Z.1    Csizmók, V.2    Tompa, P.3    Simon, I.4
  • 7
    • 8144224380 scopus 로고    scopus 로고
    • ACF1 improves the effectiveness of nucleosome mobilization by ISWI through PHD-histone contacts
    • A. Eberharter, I. Vetter, R. Ferreira, and P.B. Becker ACF1 improves the effectiveness of nucleosome mobilization by ISWI through PHD-histone contacts EMBO J. 23 2004 4029 4039
    • (2004) EMBO J. , vol.23 , pp. 4029-4039
    • Eberharter, A.1    Vetter, I.2    Ferreira, R.3    Becker, P.B.4
  • 12
    • 62649139615 scopus 로고    scopus 로고
    • DAMMIF, a program for rapid ab-initio shape determination in small angle scattering
    • D. Franke, and D.I. Svergun DAMMIF, a program for rapid ab-initio shape determination in small angle scattering J. Appl. Cryst. 42 2009 342 346
    • (2009) J. Appl. Cryst. , vol.42 , pp. 342-346
    • Franke, D.1    Svergun, D.I.2
  • 13
    • 84863643938 scopus 로고    scopus 로고
    • Automated acquisition and analysis of small angle X-ray scattering data
    • D. Franke, A.G. Kikhney, and D.I. Svergun Automated acquisition and analysis of small angle X-ray scattering data Nucl. Instrum. Methods 689 2012 52 59
    • (2012) Nucl. Instrum. Methods , vol.689 , pp. 52-59
    • Franke, D.1    Kikhney, A.G.2    Svergun, D.I.3
  • 14
    • 34547774654 scopus 로고    scopus 로고
    • Different epigenetic layers engage in complex crosstalk to define the epigenetic state of mammalian rRNA genes
    • I. Grummt Different epigenetic layers engage in complex crosstalk to define the epigenetic state of mammalian rRNA genes Hum. Mol. Genet. 16 2007 R21 R27
    • (2007) Hum. Mol. Genet. , vol.16 , pp. R21-R27
    • Grummt, I.1
  • 15
    • 70349750269 scopus 로고    scopus 로고
    • Investigating the targets of MIR-15a and MIR-16-1 in patients with chronic lymphocytic leukemia (CLL)
    • K. Hanlon, C.E. Rudin, and L.W. Harries Investigating the targets of MIR-15a and MIR-16-1 in patients with chronic lymphocytic leukemia (CLL) PLoS ONE 4 2009 e7169
    • (2009) PLoS ONE , vol.4 , pp. e7169
    • Hanlon, K.1    Rudin, C.E.2    Harries, L.W.3
  • 17
    • 50249136103 scopus 로고    scopus 로고
    • Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7
    • G. Langer, S.X. Cohen, V.S. Lamzin, and A. Perrakis Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7 Nat. Protoc. 3 2008 1171 1179
    • (2008) Nat. Protoc. , vol.3 , pp. 1171-1179
    • Langer, G.1    Cohen, S.X.2    Lamzin, V.S.3    Perrakis, A.4
  • 24
    • 23244455562 scopus 로고    scopus 로고
    • Global rigid body modeling of macromolecular complexes against small-angle scattering data
    • M.V. Petoukhov, and D.I. Svergun Global rigid body modeling of macromolecular complexes against small-angle scattering data Biophys. J. 89 2005 1237 1250
    • (2005) Biophys. J. , vol.89 , pp. 1237-1250
    • Petoukhov, M.V.1    Svergun, D.I.2
  • 26
    • 84893734843 scopus 로고    scopus 로고
    • Structural insights into acetylated-histone H4 recognition by the bromodomain-PHD finger module of human transcriptional coactivator CBP
    • A.N. Plotnikov, S. Yang, T.J. Zhou, E. Rusinova, A. Frasca, and M.M. Zhou Structural insights into acetylated-histone H4 recognition by the bromodomain-PHD finger module of human transcriptional coactivator CBP Structure 22 2014 353 360
    • (2014) Structure , vol.22 , pp. 353-360
    • Plotnikov, A.N.1    Yang, S.2    Zhou, T.J.3    Rusinova, E.4    Frasca, A.5    Zhou, M.M.6
  • 28
    • 79959893275 scopus 로고    scopus 로고
    • The PHD finger: A versatile epigenome reader
    • R. Sanchez, and M.M. Zhou The PHD finger: a versatile epigenome reader Trends Biochem. Sci. 36 2011 364 372
    • (2011) Trends Biochem. Sci. , vol.36 , pp. 364-372
    • Sanchez, R.1    Zhou, M.M.2
  • 29
    • 77950793231 scopus 로고    scopus 로고
    • Experimental phasing with SHELXC/D/E: Combining chain tracing with density modification
    • G.M. Sheldrick Experimental phasing with SHELXC/D/E: combining chain tracing with density modification Acta Crystallogr. D Biol. Crystallogr. 66 2010 479 485
    • (2010) Acta Crystallogr. D Biol. Crystallogr. , vol.66 , pp. 479-485
    • Sheldrick, G.M.1
  • 30
    • 33847684761 scopus 로고    scopus 로고
    • Solution structure of human Brg1 bromodomain and its specific binding to acetylated histone tails
    • W. Shen, C. Xu, W. Huang, J. Zhang, J.E. Carlson, X. Tu, J. Wu, and Y. Shi Solution structure of human Brg1 bromodomain and its specific binding to acetylated histone tails Biochemistry 46 2007 2100 2110
    • (2007) Biochemistry , vol.46 , pp. 2100-2110
    • Shen, W.1    Xu, C.2    Huang, W.3    Zhang, J.4    Carlson, J.E.5    Tu, X.6    Wu, J.7    Shi, Y.8
  • 32
    • 58249086425 scopus 로고    scopus 로고
    • Understanding the words of chromatin regulation
    • J.I. Wu, J. Lessard, and G.R. Crabtree Understanding the words of chromatin regulation Cell 136 2009 200 206
    • (2009) Cell , vol.136 , pp. 200-206
    • Wu, J.I.1    Lessard, J.2    Crabtree, G.R.3
  • 34
    • 41449114497 scopus 로고    scopus 로고
    • Structural basis of site-specific histone recognition by the bromodomains of human coactivators PCAF and CBP/p300
    • L. Zeng, Q. Zhang, G. Gerona-Navarro, N. Moshkina, and M.M. Zhou Structural basis of site-specific histone recognition by the bromodomains of human coactivators PCAF and CBP/p300 Structure 16 2008 643 652
    • (2008) Structure , vol.16 , pp. 643-652
    • Zeng, L.1    Zhang, Q.2    Gerona-Navarro, G.3    Moshkina, N.4    Zhou, M.M.5
  • 35
    • 23244448558 scopus 로고    scopus 로고
    • The PHD finger/bromodomain of NoRC interacts with acetylated histone H4K16 and is sufficient for rDNA silencing
    • Y. Zhou, and I. Grummt The PHD finger/bromodomain of NoRC interacts with acetylated histone H4K16 and is sufficient for rDNA silencing Curr. Biol. 15 2005 1434 1438
    • (2005) Curr. Biol. , vol.15 , pp. 1434-1438
    • Zhou, Y.1    Grummt, I.2
  • 36
    • 68249094672 scopus 로고    scopus 로고
    • Reversible acetylation of the chromatin remodelling complex NoRC is required for non-coding RNA-dependent silencing
    • Y. Zhou, K.M. Schmitz, C. Mayer, X. Yuan, A. Akhtar, and I. Grummt Reversible acetylation of the chromatin remodelling complex NoRC is required for non-coding RNA-dependent silencing Nat. Cell Biol. 11 2009 1010 1016
    • (2009) Nat. Cell Biol. , vol.11 , pp. 1010-1016
    • Zhou, Y.1    Schmitz, K.M.2    Mayer, C.3    Yuan, X.4    Akhtar, A.5    Grummt, I.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.