Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle

Proceedings of the National Academy of Sciences of the United States of America

Volumn 112, Issue 1, 2015, Pages 244-249

  He, Xuesong ^a   McLean, Jeffrey S ^b,c   Edlund, Anna ^a,c   Yooseph, Shibu ^c   Hall, Adam P ^c   Liu, Su Yang ^a   Dorrestein, Pieter C ^d   Esquenazi, Eduardo ^e   Hunter, Ryan C ^f   Cheng, Genhong ^a   Nelson, Karen E ^c   Lux, Renate ^a   Shi, Wenyuan ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

^c J CRAIG VENTER INSTITUTE   (United States)

^d UNIVERSITY OF CALIFORNIA   (United States)

^e Departments of Chemistry and Biochemistry and Pharmacology Skaggs School of Pharmacy and Pharmaceutical Sciences University of California San Diego ^*  (United States)

^f UNIVERSITY OF MINNESOTA   (United States)

Author keywords

Epibiont; Human associated; Interspecies interaction; Oral microbiome; TM7

Indexed keywords

ESSENTIAL AMINO ACID; RNA 16S; STREPTOMYCIN; TUMOR NECROSIS FACTOR ALPHA; MESSENGER RNA; TRANSCRIPTOME;

ACTINOMYCES; ACTINOMYCES MEYERI; ACTINOMYCES NAESLUNDII; ACTINOMYCES ODONTOLYTICUS; ACTINOMYCES VISCOSUS; AMINO ACID SYNTHESIS; ARTICLE; BDELLOVIBRIO; BDELLOVIBRIO BACTERIOVORUS; CELL EXPANSION; CELL MEMBRANE; CELL SHAPE; COCULTURE; COEVOLUTION; CONTROLLED STUDY; CYTOKINE PRODUCTION; DENATURING GRADIENT GEL ELECTROPHORESIS; ENDOSYMBIONT; EPIBIONT; ESCHERICHIA COLI; EUKARYOTE; GENE EXPRESSION; GENE FUNCTION; GENE LOSS; GENE SEQUENCE; GENOME; GENOME SIZE; GENOMICS; HORIZONTAL GENE TRANSFER; HOST; HOST RANGE; HUMAN; HUMAN ASSOCIATED TM7 PHYLOTYPE; IGNICOCCUS; IMMUNE RESPONSE; IMMUNOSUPPRESSIVE TREATMENT; INFLAMMATORY BOWEL DISEASE; LIQUID CHROMATOGRAPHY; MACROPHAGE; METABOLOMICS; MICROSCOPY; MOUTH CAVITY; NANOARCHAEUM EQUITANS; NONHUMAN; NUCLEIC ACID BASE SUBSTITUTION; PARASITE; PARASITE CULTIVATION; PATHOGENICITY; PERIODONTITIS; PHENOTYPE; PHYLUM; POLYAMINE METABOLISM; POTASSIUM TRANSPORT; RNA SEQUENCE; STARVATION; STRESS; SURFACE PROPERTY; SYMBIONT; SYNTENY; TRANSCRIPTOMICS; UPREGULATION; VAGINITIS; ANIMAL; BACTERIAL GENOME; BACTERIUM; CLASSIFICATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; MOUTH; PHYLOGENY; SYMBIOSIS; ULTRASTRUCTURE;

ACTINOMYCES ODONTOLYTICUS;

ACTINOMYCES; ANIMALS; BACTERIA; GENOME, BACTERIAL; HOST SPECIFICITY; HUMANS; MACROPHAGES; MOLECULAR SEQUENCE DATA; MOUTH; PARASITES; PHYLOGENY; RNA, MESSENGER; SYMBIOSIS; SYNTENY; TRANSCRIPTOME; TUMOR NECROSIS FACTOR-ALPHA;

EID: 84920432296     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1419038112     Document Type: Article

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