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Volumn 12, Issue , 2011, Pages

Genomic insights into an obligate epibiotic bacterial predator: Micavibrio aeruginosavorus ARL-13

Author keywords

Bacterial predation; Hemolysin related protein; Integrative and conjugative elements (ices); Predator prey interaction; Quorum sensing; RNA seq

Indexed keywords

PILIN; PORIN; RNA; BACTERIAL DNA; TRANSCRIPTOME;

EID: 80053174248     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-12-453     Document Type: Article
Times cited : (62)

References (68)
  • 1
    • 0043137852 scopus 로고
    • Bacterial Predators of Micrococcus luteus in Soil
    • 291471, 16345566
    • Casida LE. Bacterial Predators of Micrococcus luteus in Soil. Appl Environ Microbiol 1980, 39:1035-1041. 291471, 16345566.
    • (1980) Appl Environ Microbiol , vol.39 , pp. 1035-1041
    • Casida, L.E.1
  • 2
    • 0020623617 scopus 로고
    • Ensifer adhaerens Predatory Activity Against Other Bacteria in Soil, as Monitored by Indirect Phage Analysis
    • 242466, 16346275
    • Germida JJ, Casida LE. Ensifer adhaerens Predatory Activity Against Other Bacteria in Soil, as Monitored by Indirect Phage Analysis. Appl Environ Microbiol 1983, 45:1380-1388. 242466, 16346275.
    • (1983) Appl Environ Microbiol , vol.45 , pp. 1380-1388
    • Germida, J.J.1    Casida, L.E.2
  • 3
    • 79960559802 scopus 로고    scopus 로고
    • Prey bacteria shape the community structure of their predators
    • Chen H, Athar R, Zheng G, Williams HN. Prey bacteria shape the community structure of their predators. Isme J 2011,
    • (2011) Isme J
    • Chen, H.1    Athar, R.2    Zheng, G.3    Williams, H.N.4
  • 5
    • 34250166196 scopus 로고    scopus 로고
    • Phylogenetic Diversity and Evolution of Predatory Prokaryotes
    • Jurkevitch E, Davidov Y. Phylogenetic Diversity and Evolution of Predatory Prokaryotes. Microbiology Monographs 2007, 4:11-56.
    • (2007) Microbiology Monographs , vol.4 , pp. 11-56
    • Jurkevitch, E.1    Davidov, Y.2
  • 6
    • 78650997196 scopus 로고    scopus 로고
    • Predation of human pathogens by the predatory bacteria Micavibrio aeruginosavorus and Bdellovibrio bacteriovorus
    • Dashiff A, Junka RA, Libera M, Kadouri DE. Predation of human pathogens by the predatory bacteria Micavibrio aeruginosavorus and Bdellovibrio bacteriovorus. J Appl Microbiol 2010, 110:431-444.
    • (2010) J Appl Microbiol , vol.110 , pp. 431-444
    • Dashiff, A.1    Junka, R.A.2    Libera, M.3    Kadouri, D.E.4
  • 8
    • 33846427383 scopus 로고    scopus 로고
    • Vulnerability of pathogenic biofilms to Micavibrio aeruginosavorus
    • 10.1128/AEM.01893-06, 1796979, 17098913
    • Kadouri D, Venzon NC, O'Toole GA. Vulnerability of pathogenic biofilms to Micavibrio aeruginosavorus. Appl Environ Microbiol 2007, 73:605-614. 10.1128/AEM.01893-06, 1796979, 17098913.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 605-614
    • Kadouri, D.1    Venzon, N.C.2    O'Toole, G.A.3
  • 9
    • 33750901290 scopus 로고    scopus 로고
    • A new alpha-proteobacterial clade of Bdellovibrio-like predators: implications for the mitochondrial endosymbiotic theory
    • 10.1111/j.1462-2920.2006.01101.x, 17107559
    • Davidov Y, Huchon D, Koval SF, Jurkevitch E. A new alpha-proteobacterial clade of Bdellovibrio-like predators: implications for the mitochondrial endosymbiotic theory. Environ Microbiol 2006, 8:2179-2188. 10.1111/j.1462-2920.2006.01101.x, 17107559.
    • (2006) Environ Microbiol , vol.8 , pp. 2179-2188
    • Davidov, Y.1    Huchon, D.2    Koval, S.F.3    Jurkevitch, E.4
  • 10
    • 0023079030 scopus 로고
    • Analysis of the interpopulational interactions in a 2-component bacterial system of Micavibrio admirandus - Escherichia coli
    • Afinogenova AV, Markelova N, Lambina VA. Analysis of the interpopulational interactions in a 2-component bacterial system of Micavibrio admirandus - Escherichia coli. Nauchnye Doki Vyss Shkoly Biol Nauki 1987, 6:101-104.
    • (1987) Nauchnye Doki Vyss Shkoly Biol Nauki , vol.6 , pp. 101-104
    • Afinogenova, A.V.1    Markelova, N.2    Lambina, V.A.3
  • 12
    • 68149094083 scopus 로고    scopus 로고
    • Deciphering the hunting strategy of a bacterial wolfpack
    • 10.1111/j.1574-6976.2009.00185.x, 2774760, 19519767
    • Berleman JE, Kirby JR. Deciphering the hunting strategy of a bacterial wolfpack. FEMS Microbiol Rev 2009, 33:942-957. 10.1111/j.1574-6976.2009.00185.x, 2774760, 19519767.
    • (2009) FEMS Microbiol Rev , vol.33 , pp. 942-957
    • Berleman, J.E.1    Kirby, J.R.2
  • 13
    • 70349547205 scopus 로고    scopus 로고
    • Predatory lifestyle of Bdellovibrio bacteriovorus
    • 10.1146/annurev.micro.091208.073346, 19575566
    • Sockett RE. Predatory lifestyle of Bdellovibrio bacteriovorus. Annu Rev Microbiol 2009, 63:523-539. 10.1146/annurev.micro.091208.073346, 19575566.
    • (2009) Annu Rev Microbiol , vol.63 , pp. 523-539
    • Sockett, R.E.1
  • 16
    • 74249095519 scopus 로고    scopus 로고
    • CRISPR/Cas, the immune system of bacteria and archaea
    • 10.1126/science.1179555, 20056882
    • Horvath P, Barrangou R. CRISPR/Cas, the immune system of bacteria and archaea. Science 2010, 327:167-170. 10.1126/science.1179555, 20056882.
    • (2010) Science , vol.327 , pp. 167-170
    • Horvath, P.1    Barrangou, R.2
  • 17
    • 0035800661 scopus 로고    scopus 로고
    • Evolution of tuf genes: ancient duplication, differential loss and gene conversion
    • 10.1016/S0014-5793(01)02639-4, 11583110
    • Lathe WC, Bork P. Evolution of tuf genes: ancient duplication, differential loss and gene conversion. FEBS Lett 2001, 502:113-116. 10.1016/S0014-5793(01)02639-4, 11583110.
    • (2001) FEBS Lett , vol.502 , pp. 113-116
    • Lathe, W.C.1    Bork, P.2
  • 19
    • 0034618559 scopus 로고    scopus 로고
    • Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS
    • 10.1038/35024074, 10993077
    • Shigenobu S, Watanabe H, Hattori M, Sakaki Y, Ishikawa H. Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS. Nature 2000, 407:81-86. 10.1038/35024074, 10993077.
    • (2000) Nature , vol.407 , pp. 81-86
    • Shigenobu, S.1    Watanabe, H.2    Hattori, M.3    Sakaki, Y.4    Ishikawa, H.5
  • 24
    • 77953981581 scopus 로고    scopus 로고
    • Complete genome sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a representative of the SAR116 clade in the Alphaproteobacteria
    • 10.1128/JB.00347-10, 2901696, 20382761
    • Oh HM, Kwon KK, Kang I, Kang SG, Lee JH, Kim SJ, Cho JC. Complete genome sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a representative of the SAR116 clade in the Alphaproteobacteria. J Bacteriol 2010, 192:3240-3241. 10.1128/JB.00347-10, 2901696, 20382761.
    • (2010) J Bacteriol , vol.192 , pp. 3240-3241
    • Oh, H.M.1    Kwon, K.K.2    Kang, I.3    Kang, S.G.4    Lee, J.H.5    Kim, S.J.6    Cho, J.C.7
  • 25
    • 0014604024 scopus 로고
    • Isolation and characterization of host-independent Bdellovibrios
    • 250157, 4901359
    • Seidler RJ, Starr MP. Isolation and characterization of host-independent Bdellovibrios. J Bacteriol 1969, 100:769-785. 250157, 4901359.
    • (1969) J Bacteriol , vol.100 , pp. 769-785
    • Seidler, R.J.1    Starr, M.P.2
  • 26
    • 0016032008 scopus 로고
    • Minimum nutritional requirements for growth of host-independent derivatives of Bdellovibrio bacteriovorus strain 109 Davis
    • 10.1139/m74-041, 4595744
    • Ishiguro EE. Minimum nutritional requirements for growth of host-independent derivatives of Bdellovibrio bacteriovorus strain 109 Davis. Can J Microbiol 1974, 20:263-264. 10.1139/m74-041, 4595744.
    • (1974) Can J Microbiol , vol.20 , pp. 263-264
    • Ishiguro, E.E.1
  • 27
    • 85056030576 scopus 로고    scopus 로고
    • A New Method for Isolating Host-Independent Variants of Bdellovibrio bacteriovorus Using E. coli Auxotrophs
    • 10.2174/1874285800903000087, 2705846, 19590595
    • Dashiff A, Kadouri DE. A New Method for Isolating Host-Independent Variants of Bdellovibrio bacteriovorus Using E. coli Auxotrophs. Open Microbiol J 2009, 3:87-91. 10.2174/1874285800903000087, 2705846, 19590595.
    • (2009) Open Microbiol J , vol.3 , pp. 87-91
    • Dashiff, A.1    Kadouri, D.E.2
  • 30
    • 79951705599 scopus 로고    scopus 로고
    • Intercellular nanotubes mediate bacterial communication
    • 10.1016/j.cell.2011.01.015, 21335240
    • Dubey GP, Ben-Yehuda S. Intercellular nanotubes mediate bacterial communication. Cell 2011, 144:590-600. 10.1016/j.cell.2011.01.015, 21335240.
    • (2011) Cell , vol.144 , pp. 590-600
    • Dubey, G.P.1    Ben-Yehuda, S.2
  • 31
    • 0037007636 scopus 로고    scopus 로고
    • A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont
    • 10.1038/417063a, 11986665
    • Huber H, Hohn MJ, Rachel R, Fuchs T, Wimmer VC, Stetter KO. A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont. Nature 2002, 417:63-67. 10.1038/417063a, 11986665.
    • (2002) Nature , vol.417 , pp. 63-67
    • Huber, H.1    Hohn, M.J.2    Rachel, R.3    Fuchs, T.4    Wimmer, V.C.5    Stetter, K.O.6
  • 32
    • 0020417847 scopus 로고
    • Ensifer adhaerens gen. nov., sp. nov.: a bacerial predator of bacteria in soil
    • Casida LE. Ensifer adhaerens gen. nov., sp. nov.: a bacerial predator of bacteria in soil. International Journal of Systematic Bacteriology 1982, 32:339-345.
    • (1982) International Journal of Systematic Bacteriology , vol.32 , pp. 339-345
    • Casida, L.E.1
  • 33
    • 0033198608 scopus 로고    scopus 로고
    • The interaction between RTX toxins and target cells
    • 10.1016/S0966-842X(99)01530-9, 10470043
    • Lally ET, Hill RB, Kieba IR, Korostoff J. The interaction between RTX toxins and target cells. Trends Microbiol 1999, 7:356-361. 10.1016/S0966-842X(99)01530-9, 10470043.
    • (1999) Trends Microbiol , vol.7 , pp. 356-361
    • Lally, E.T.1    Hill, R.B.2    Kieba, I.R.3    Korostoff, J.4
  • 34
    • 0022654450 scopus 로고
    • Escherichia coli hemolysin may damage target cell membranes by generating transmembrane pores
    • 262198, 3514465
    • Bhakdi S, Mackman N, Nicaud JM, Holland IB. Escherichia coli hemolysin may damage target cell membranes by generating transmembrane pores. Infect Immun 1986, 52:63-69. 262198, 3514465.
    • (1986) Infect Immun , vol.52 , pp. 63-69
    • Bhakdi, S.1    Mackman, N.2    Nicaud, J.M.3    Holland, I.B.4
  • 35
    • 0027230853 scopus 로고
    • Role of iron in regulation of virulence genes
    • 358274, 8472246
    • Litwin CM, Calderwood SB. Role of iron in regulation of virulence genes. Clin Microbiol Rev 1993, 6:137-149. 358274, 8472246.
    • (1993) Clin Microbiol Rev , vol.6 , pp. 137-149
    • Litwin, C.M.1    Calderwood, S.B.2
  • 36
    • 0024414280 scopus 로고
    • Lectins as cell recognition molecules
    • 10.1126/science.2552581, 2552581
    • Sharon N, Lis H. Lectins as cell recognition molecules. Science 1989, 246:227-234. 10.1126/science.2552581, 2552581.
    • (1989) Science , vol.246 , pp. 227-234
    • Sharon, N.1    Lis, H.2
  • 37
    • 33846424838 scopus 로고
    • Role of carbohydrate receptors in the interaction of Micavibrio admirandus and host-bacterium
    • Chemeris NA, Afinogennova AV. Role of carbohydrate receptors in the interaction of Micavibrio admirandus and host-bacterium. Zentbl Mikrobiol 1986, 141:557-560.
    • (1986) Zentbl Mikrobiol , vol.141 , pp. 557-560
    • Chemeris, N.A.1    Afinogennova, A.V.2
  • 38
    • 79953279349 scopus 로고    scopus 로고
    • Inhibition of Predation by Bdellovibrio bacteriovorus and Micavibrio aeruginosavorus via Host Cell Metabolic Activity in the Presence of Carbohydrates
    • 10.1128/AEM.02565-10, 21317250
    • Dashiff A, Keeling TG, Kadouri DE. Inhibition of Predation by Bdellovibrio bacteriovorus and Micavibrio aeruginosavorus via Host Cell Metabolic Activity in the Presence of Carbohydrates. Appl Environ Microbiol 2011, 77:2224-2231. 10.1128/AEM.02565-10, 21317250.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 2224-2231
    • Dashiff, A.1    Keeling, T.G.2    Kadouri, D.E.3
  • 39
    • 0027536915 scopus 로고
    • Von Willebrand factor
    • Ruggeri ZM, Ware J. von Willebrand factor. Faseb J 1993, 7:308-316.
    • (1993) Faseb J , vol.7 , pp. 308-316
    • Ruggeri, Z.M.1    Ware, J.2
  • 40
    • 12844269401 scopus 로고    scopus 로고
    • Characterization of outer membrane protein fractions of Bdellovibrionales
    • 10.1016/j.femsle.2004.12.006, 15668021
    • Beck S, Schwudke D, Appel B, Linscheid M, Strauch E. Characterization of outer membrane protein fractions of Bdellovibrionales. FEMS Microbiol Lett 2005, 243:211-217. 10.1016/j.femsle.2004.12.006, 15668021.
    • (2005) FEMS Microbiol Lett , vol.243 , pp. 211-217
    • Beck, S.1    Schwudke, D.2    Appel, B.3    Linscheid, M.4    Strauch, E.5
  • 41
    • 0027954153 scopus 로고
    • Translocation of an outer membrane protein into prey cytoplasmic membranes by bdellovibrios
    • 205143, 8106336
    • Tudor JJ, Karp MA. Translocation of an outer membrane protein into prey cytoplasmic membranes by bdellovibrios. J Bacteriol 1994, 176:948-952. 205143, 8106336.
    • (1994) J Bacteriol , vol.176 , pp. 948-952
    • Tudor, J.J.1    Karp, M.A.2
  • 42
    • 80053584086 scopus 로고    scopus 로고
    • Genetics and phylogeny of RTX cytolysins
    • Amsterdam; Boston: Elsevier, Alouf JE, Popoff MR, 3
    • Frey J. Genetics and phylogeny of RTX cytolysins. The comprehensive sourcebook of bacterial protein toxins 2006, 570-577. Amsterdam; Boston: Elsevier, Alouf JE, Popoff MR, 3.
    • (2006) The comprehensive sourcebook of bacterial protein toxins , pp. 570-577
    • Frey, J.1
  • 43
    • 0035029580 scopus 로고    scopus 로고
    • Biology of type II secretion
    • 10.1046/j.1365-2958.2001.02403.x, 11309111
    • Sandkvist M. Biology of type II secretion. Mol Microbiol 2001, 40:271-283. 10.1046/j.1365-2958.2001.02403.x, 11309111.
    • (2001) Mol Microbiol , vol.40 , pp. 271-283
    • Sandkvist, M.1
  • 44
    • 80053599602 scopus 로고
    • Isolation and some physicochemical properties of lytic proteinase of the parasitic bacterium Micavibrio admirandus
    • Severin AI, Markelova NY, Afinogenova AV, Kulaev IS. Isolation and some physicochemical properties of lytic proteinase of the parasitic bacterium Micavibrio admirandus. Biokhimiya 1987, 52:1594-1599.
    • (1987) Biokhimiya , vol.52 , pp. 1594-1599
    • Severin, A.I.1    Markelova, N.Y.2    Afinogenova, A.V.3    Kulaev, I.S.4
  • 45
    • 41649112997 scopus 로고    scopus 로고
    • Development of a novel system for isolating genes involved in predator-prey interactions using host independent derivatives of Bdellovibrio bacteriovorus 109J
    • 10.1186/1471-2180-8-33, 2277423, 18284687
    • Medina AA, Shanks RM, Kadouri DE. Development of a novel system for isolating genes involved in predator-prey interactions using host independent derivatives of Bdellovibrio bacteriovorus 109J. BMC Microbiol 2008, 8:33. 10.1186/1471-2180-8-33, 2277423, 18284687.
    • (2008) BMC Microbiol , vol.8 , pp. 33
    • Medina, A.A.1    Shanks, R.M.2    Kadouri, D.E.3
  • 46
    • 0036405357 scopus 로고    scopus 로고
    • Type IV pili and twitching motility
    • 10.1146/annurev.micro.56.012302.160938, 12142488
    • Mattick JS. Type IV pili and twitching motility. Annu Rev Microbiol 2002, 56:289-314. 10.1146/annurev.micro.56.012302.160938, 12142488.
    • (2002) Annu Rev Microbiol , vol.56 , pp. 289-314
    • Mattick, J.S.1
  • 47
    • 34347379743 scopus 로고    scopus 로고
    • Predation by Bdellovibrio bacteriovorus HD100 requires type IV pili
    • 10.1128/JB.01942-06, 1913455, 17416646
    • Evans KJ, Lambert C, Sockett RE. Predation by Bdellovibrio bacteriovorus HD100 requires type IV pili. J Bacteriol 2007, 189:4850-4859. 10.1128/JB.01942-06, 1913455, 17416646.
    • (2007) J Bacteriol , vol.189 , pp. 4850-4859
    • Evans, K.J.1    Lambert, C.2    Sockett, R.E.3
  • 48
    • 77950683135 scopus 로고    scopus 로고
    • Characterization of type IV pili in the life cycle of the predator bacterium Bdellovibrio
    • 10.1099/mic.0.036137-0, 20056705
    • Mahmoud KK, Koval SF. Characterization of type IV pili in the life cycle of the predator bacterium Bdellovibrio. Microbiology 2010, 156:1040-1051. 10.1099/mic.0.036137-0, 20056705.
    • (2010) Microbiology , vol.156 , pp. 1040-1051
    • Mahmoud, K.K.1    Koval, S.F.2
  • 49
    • 77954761569 scopus 로고    scopus 로고
    • Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow
    • 10.1038/nrmicro2382, 20601965
    • Wozniak RA, Waldor MK. Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow. Nat Rev Microbiol 2010, 8:552-563. 10.1038/nrmicro2382, 20601965.
    • (2010) Nat Rev Microbiol , vol.8 , pp. 552-563
    • Wozniak, R.A.1    Waldor, M.K.2
  • 50
    • 2942689400 scopus 로고    scopus 로고
    • Shaping bacterial genomes with integrative and conjugative elements
    • 10.1016/j.resmic.2004.01.012, 15207870
    • Burrus V, Waldor MK. Shaping bacterial genomes with integrative and conjugative elements. Res Microbiol 2004, 155:376-386. 10.1016/j.resmic.2004.01.012, 15207870.
    • (2004) Res Microbiol , vol.155 , pp. 376-386
    • Burrus, V.1    Waldor, M.K.2
  • 51
    • 33749565756 scopus 로고    scopus 로고
    • Pathogenicity islands: a molecular toolbox for bacterial virulence
    • 10.1111/j.1462-5822.2006.00794.x, 16939533
    • Gal-Mor O, Finlay BB. Pathogenicity islands: a molecular toolbox for bacterial virulence. Cell Microbiol 2006, 8:1707-1719. 10.1111/j.1462-5822.2006.00794.x, 16939533.
    • (2006) Cell Microbiol , vol.8 , pp. 1707-1719
    • Gal-Mor, O.1    Finlay, B.B.2
  • 52
    • 1642475095 scopus 로고    scopus 로고
    • Pathogenicity islands in bacterial pathogenesis
    • 10.1128/CMR.17.1.14-56.2004, 321463, 14726454
    • Schmidt H, Hensel M. Pathogenicity islands in bacterial pathogenesis. Clin Microbiol Rev 2004, 17:14-56. 10.1128/CMR.17.1.14-56.2004, 321463, 14726454.
    • (2004) Clin Microbiol Rev , vol.17 , pp. 14-56
    • Schmidt, H.1    Hensel, M.2
  • 53
    • 75149149874 scopus 로고    scopus 로고
    • Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs
    • 10.1186/1471-2164-10-641, 2813243, 20042087
    • Oliver HF, Orsi RH, Ponnala L, Keich U, Wang W, Sun Q, Cartinhour SW, Filiatrault MJ, Wiedmann M, Boor KJ. Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs. BMC Genomics 2009, 10:641. 10.1186/1471-2164-10-641, 2813243, 20042087.
    • (2009) BMC Genomics , vol.10 , pp. 641
    • Oliver, H.F.1    Orsi, R.H.2    Ponnala, L.3    Keich, U.4    Wang, W.5    Sun, Q.6    Cartinhour, S.W.7    Filiatrault, M.J.8    Wiedmann, M.9    Boor, K.J.10
  • 54
    • 45549088326 scopus 로고    scopus 로고
    • The transcriptional landscape of the yeast genome defined by RNA sequencing
    • 10.1126/science.1158441, 2951732, 18451266
    • Nagalakshmi U, Wang Z, Waern K, Shou C, Raha D, Gerstein M, Snyder M. The transcriptional landscape of the yeast genome defined by RNA sequencing. Science 2008, 320:1344-1349. 10.1126/science.1158441, 2951732, 18451266.
    • (2008) Science , vol.320 , pp. 1344-1349
    • Nagalakshmi, U.1    Wang, Z.2    Waern, K.3    Shou, C.4    Raha, D.5    Gerstein, M.6    Snyder, M.7
  • 55
    • 62649160909 scopus 로고    scopus 로고
    • Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing
    • 10.1073/pnas.0813403106, 2645912, 19234113
    • Yoder-Himes DR, Chain PS, Zhu Y, Wurtzel O, Rubin EM, Tiedje JM, Sorek R. Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing. Proc Natl Acad Sci USA 2009, 106:3976-3981. 10.1073/pnas.0813403106, 2645912, 19234113.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 3976-3981
    • Yoder-Himes, D.R.1    Chain, P.S.2    Zhu, Y.3    Wurtzel, O.4    Rubin, E.M.5    Tiedje, J.M.6    Sorek, R.7
  • 56
    • 0031015217 scopus 로고    scopus 로고
    • CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone
    • 10.1074/jbc.272.1.196, 8995247
    • Jiang W, Hou Y, Inouye M. CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone. J Biol Chem 1997, 272:196-202. 10.1074/jbc.272.1.196, 8995247.
    • (1997) J Biol Chem , vol.272 , pp. 196-202
    • Jiang, W.1    Hou, Y.2    Inouye, M.3
  • 57
    • 0030826392 scopus 로고    scopus 로고
    • A family of cold shock proteins in Bacillus subtilis is essential for cellular growth and for efficient protein synthesis at optimal and low temperatures
    • 10.1046/j.1365-2958.1997.5121878.x, 9379903
    • Graumann P, Wendrich TM, Weber MH, Schroder K, Marahiel MA. A family of cold shock proteins in Bacillus subtilis is essential for cellular growth and for efficient protein synthesis at optimal and low temperatures. Mol Microbiol 1997, 25:741-756. 10.1046/j.1365-2958.1997.5121878.x, 9379903.
    • (1997) Mol Microbiol , vol.25 , pp. 741-756
    • Graumann, P.1    Wendrich, T.M.2    Weber, M.H.3    Schroder, K.4    Marahiel, M.A.5
  • 58
    • 0033119730 scopus 로고    scopus 로고
    • Activities of cold-shock domain proteins in translation control
    • 10.1002/(SICI)1521-1878(199904)21:4<319::AID-BIES8>3.0.CO;2-3, 10377894
    • Sommerville J. Activities of cold-shock domain proteins in translation control. Bioessays 1999, 21:319-325. 10.1002/(SICI)1521-1878(199904)21:4<319::AID-BIES8>3.0.CO;2-3, 10377894.
    • (1999) Bioessays , vol.21 , pp. 319-325
    • Sommerville, J.1
  • 59
    • 0027450858 scopus 로고
    • Heat shock-induced axenic growth of Bdellovibrio bacteriovorus
    • 204335, 8458859
    • Gordon RF, Stein MA, Diedrich DL. Heat shock-induced axenic growth of Bdellovibrio bacteriovorus. J Bacteriol 1993, 175:2157-2161. 204335, 8458859.
    • (1993) J Bacteriol , vol.175 , pp. 2157-2161
    • Gordon, R.F.1    Stein, M.A.2    Diedrich, D.L.3
  • 61
    • 51849115331 scopus 로고    scopus 로고
    • IGS Annotation Engine
    • IGS Annotation Engine. , http://ae.igs.umaryland.edu/cgi/index.cgi
  • 62
    • 25444516430 scopus 로고    scopus 로고
    • The Vmatch large scale sequence analysis software
    • Kurtz S. The Vmatch large scale sequence analysis software. 2004,
    • (2004)
    • Kurtz, S.1
  • 63
    • 55649110049 scopus 로고    scopus 로고
    • A simple, fast, and accurate method of phylogenomic inference
    • 10.1186/gb-2008-9-10-r151, 2760878, 18851752
    • Wu M, Eisen JA. A simple, fast, and accurate method of phylogenomic inference. Genome Biol 2008, 9:R151. 10.1186/gb-2008-9-10-r151, 2760878, 18851752.
    • (2008) Genome Biol , vol.9
    • Wu, M.1    Eisen, J.A.2
  • 64
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • 10.1080/10635150390235520, 14530136
    • Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003, 52:696-704. 10.1080/10635150390235520, 14530136.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 65
    • 84874604550 scopus 로고    scopus 로고
    • FASTX-Toolkit: FASTQ/A short-reads pre-processing tools
    • FASTX-Toolkit: FASTQ/A short-reads pre-processing tools. , http://hannonlab.cshl.edu/fastx_toolkit/index.html
  • 66
    • 79960023926 scopus 로고    scopus 로고
    • Maq: Mapping and Assembly with Qualities
    • Maq: Mapping and Assembly with Qualities. , http://maq.sourceforge.net/
  • 68
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • 10.1006/meth.2001.1262, 11846609
    • Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 2001, 25:402-408. 10.1006/meth.2001.1262, 11846609.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.