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Volumn 328, Issue , 2015, Pages 66-74

Multi-walled carbon nanotube-induced gene expression in vitro: Concordance with in vivo studies

Author keywords

Coculture; Correlation; Gene expression; In vitro; In vivo

Indexed keywords

ATM PROTEIN; BIOLOGICAL MARKER; LIVER X RECEPTOR; METALLOPROTEINASE; MULTI WALLED NANOTUBE; PHOSPHATIDYLINOSITOL 3,4,5 TRISPHOSPHATE 3 PHOSPHATASE; RETINOID X RECEPTOR; CARBON NANOTUBE; GENETIC MARKER; MESSENGER RNA;

EID: 84919934305     PISSN: 0300483X     EISSN: 18793185     Source Type: Journal    
DOI: 10.1016/j.tox.2014.12.012     Document Type: Article
Times cited : (44)

References (60)
  • 1
    • 79952096381 scopus 로고    scopus 로고
    • The evolution of bioinformatics in toxicology: advancing toxicogenomics
    • Afshari C.A., Hamadeh H.K., Bushel P.R. The evolution of bioinformatics in toxicology: advancing toxicogenomics. Toxicol. Sci. 2011, 120(Suppl. 1):S225-237.
    • (2011) Toxicol. Sci. , vol.120 , pp. S225-237
    • Afshari, C.A.1    Hamadeh, H.K.2    Bushel, P.R.3
  • 4
    • 84863639111 scopus 로고    scopus 로고
    • Resolving the ortholog conjecture: orthologs tend to be weakly, but significantly, more similar in function than paralogs
    • Altenhoff A.M., Studer R.A., Robinson-Rechavi M., Dessimoz C. Resolving the ortholog conjecture: orthologs tend to be weakly, but significantly, more similar in function than paralogs. PLoS Comput. Biol. 2012, 8:e1002514.
    • (2012) PLoS Comput. Biol. , vol.8 , pp. e1002514
    • Altenhoff, A.M.1    Studer, R.A.2    Robinson-Rechavi, M.3    Dessimoz, C.4
  • 6
    • 21444432708 scopus 로고    scopus 로고
    • Gene expression profile analysis: an emerging approach to investigate mechanisms of genotoxicity
    • Aubrecht J., Caba E. Gene expression profile analysis: an emerging approach to investigate mechanisms of genotoxicity. Pharmacogenomics 2005, 6:419-428.
    • (2005) Pharmacogenomics , vol.6 , pp. 419-428
    • Aubrecht, J.1    Caba, E.2
  • 7
    • 84874582970 scopus 로고    scopus 로고
    • The CULTEX RFS: a comprehensive technical approach for the in vitro exposure of airway epithelial cells to the particulate matter at the air-liquid interface
    • Aufderheide M., Halter B., Mohle N., Hochrainer D. The CULTEX RFS: a comprehensive technical approach for the in vitro exposure of airway epithelial cells to the particulate matter at the air-liquid interface. BioMed Res. Int. 2013, 2013:734137.
    • (2013) BioMed Res. Int. , vol.2013 , pp. 734137
    • Aufderheide, M.1    Halter, B.2    Mohle, N.3    Hochrainer, D.4
  • 8
    • 0031952083 scopus 로고    scopus 로고
    • Tight junctions
    • Balda M.S., Matter K. Tight junctions. J. Cell Sci. 1998, 111(Pt. 5):541-547.
    • (1998) J. Cell Sci. , vol.111 , pp. 541-547
    • Balda, M.S.1    Matter, K.2
  • 11
  • 12
    • 84891321311 scopus 로고    scopus 로고
    • A comparative study of different in vitro lung cell culture systems to assess the most beneficial tool for screening the potential adverse effects of carbon nanotubes
    • Clift M.J., Endes C., Vanhecke D., Wick P., Gehr P., Schins R.P., Petri-Fink A., Rothen-Rutishauser B. A comparative study of different in vitro lung cell culture systems to assess the most beneficial tool for screening the potential adverse effects of carbon nanotubes. Toxicol. Sci. 2014, 137:55-64.
    • (2014) Toxicol. Sci. , vol.137 , pp. 55-64
    • Clift, M.J.1    Endes, C.2    Vanhecke, D.3    Wick, P.4    Gehr, P.5    Schins, R.P.6    Petri-Fink, A.7    Rothen-Rutishauser, B.8
  • 13
    • 84873808704 scopus 로고    scopus 로고
    • Carbon nanotubes: present and future commercial applications
    • De Volder M.F., Tawfick S.H., Baughman R.H., Hart A.J. Carbon nanotubes: present and future commercial applications. Science 2013, 339:535-539.
    • (2013) Science , vol.339 , pp. 535-539
    • De Volder, M.F.1    Tawfick, S.H.2    Baughman, R.H.3    Hart, A.J.4
  • 14
    • 49449085976 scopus 로고    scopus 로고
    • The response of a co-culture lung model to fine and ultrafine particles of incinerator fly ash at the air-liquid interface
    • Diabate S., Mulhopt S., Paur H.R., Krug H.F. The response of a co-culture lung model to fine and ultrafine particles of incinerator fly ash at the air-liquid interface. Alternatives Lab. Anim.: ATLA 2008, 36:285-298.
    • (2008) Alternatives Lab. Anim.: ATLA , vol.36 , pp. 285-298
    • Diabate, S.1    Mulhopt, S.2    Paur, H.R.3    Krug, H.F.4
  • 15
    • 19544383638 scopus 로고    scopus 로고
    • Sample size determination in microarray experiments for class comparison and prognostic classification
    • Dobbin K., Simon R. Sample size determination in microarray experiments for class comparison and prognostic classification. Biostatistics 2005, 6:27-38.
    • (2005) Biostatistics , vol.6 , pp. 27-38
    • Dobbin, K.1    Simon, R.2
  • 16
    • 0035721766 scopus 로고    scopus 로고
    • Alveolar epithelial type II cell: defender of the alveolus revisited
    • Fehrenbach H. Alveolar epithelial type II cell: defender of the alveolus revisited. Respir. Res. 2001, 2:33-46.
    • (2001) Respir. Res. , vol.2 , pp. 33-46
    • Fehrenbach, H.1
  • 19
    • 59849129394 scopus 로고    scopus 로고
    • Food for thought on the evolution of toxicology and the phasing out of animal testing
    • Hartung T., Leist M. Food for thought on the evolution of toxicology and the phasing out of animal testing. ALTEX 2008, 25:91-102\\.
    • (2008) ALTEX , vol.25 , pp. 91-102\\
    • Hartung, T.1    Leist, M.2
  • 20
    • 2642518040 scopus 로고    scopus 로고
    • Lung epithelial cell lines in coculture with human pulmonary microvascular endothelial cells: development of an alveolo-capillary barrier in vitro
    • Hermanns M.I., Unger R.E., Kehe K., Peters K., Kirkpatrick C.J. Lung epithelial cell lines in coculture with human pulmonary microvascular endothelial cells: development of an alveolo-capillary barrier in vitro. Lab. Invest. J. Tech. Methods Pathol. 2004, 84:736-752.
    • (2004) Lab. Invest. J. Tech. Methods Pathol. , vol.84 , pp. 736-752
    • Hermanns, M.I.1    Unger, R.E.2    Kehe, K.3    Peters, K.4    Kirkpatrick, C.J.5
  • 22
    • 77952829224 scopus 로고    scopus 로고
    • A critical review of the biological mechanisms underlying the in vivo and in vitro toxicity of carbon nanotubes: the contribution of physico-chemical characteristics
    • Johnston H.J., Hutchison G.R., Christensen F.M., Peters S., Hankin S., Aschberger K., Stone V. A critical review of the biological mechanisms underlying the in vivo and in vitro toxicity of carbon nanotubes: the contribution of physico-chemical characteristics. Nanotoxicology 2010, 4:207-246.
    • (2010) Nanotoxicology , vol.4 , pp. 207-246
    • Johnston, H.J.1    Hutchison, G.R.2    Christensen, F.M.3    Peters, S.4    Hankin, S.5    Aschberger, K.6    Stone, V.7
  • 23
    • 79251576161 scopus 로고    scopus 로고
    • Inflammatory and cytotoxic responses of an alveolar-capillary coculture model to silica nanoparticles: comparison with conventional monocultures
    • Kasper J., Hermanns M.I., Bantz C., Maskos M., Stauber R., Pohl C., Unger R.E., Kirkpatrick J.C. Inflammatory and cytotoxic responses of an alveolar-capillary coculture model to silica nanoparticles: comparison with conventional monocultures. Part. Fibre Toxicol. 2011, 8:6.
    • (2011) Part. Fibre Toxicol. , vol.8 , pp. 6
    • Kasper, J.1    Hermanns, M.I.2    Bantz, C.3    Maskos, M.4    Stauber, R.5    Pohl, C.6    Unger, R.E.7    Kirkpatrick, J.C.8
  • 24
    • 84858314394 scopus 로고    scopus 로고
    • BioMart: driving a paradigm change in biological data management
    • bar049
    • Kasprzyk A. BioMart: driving a paradigm change in biological data management. Database: J. Biol. Databases Curation 2011, 2011:bar049.
    • (2011) Database: J. Biol. Databases Curation , vol.2011
    • Kasprzyk, A.1
  • 26
    • 84893292997 scopus 로고    scopus 로고
    • Molecular interactions of nanomaterials and organisms: defining biomarkers for toxicity and high-throughput screening using traditional and next-generation sequencing approaches
    • Klaper R., Arndt D., Bozich J., Dominguez G. Molecular interactions of nanomaterials and organisms: defining biomarkers for toxicity and high-throughput screening using traditional and next-generation sequencing approaches. Analyst 2014, 139:882-895.
    • (2014) Analyst , vol.139 , pp. 882-895
    • Klaper, R.1    Arndt, D.2    Bozich, J.3    Dominguez, G.4
  • 27
    • 82655172901 scopus 로고    scopus 로고
    • Potential of coculture in vitro models to study inflammatory and sensitizing effects of particles on the lung
    • Klein S.G., Hennen J., Serchi T., Blomeke B., Gutleb A.C. Potential of coculture in vitro models to study inflammatory and sensitizing effects of particles on the lung. Toxicol. In Vitro 2011, 25:1516-1534.
    • (2011) Toxicol. In Vitro , vol.25 , pp. 1516-1534
    • Klein, S.G.1    Hennen, J.2    Serchi, T.3    Blomeke, B.4    Gutleb, A.C.5
  • 30
    • 77950291648 scopus 로고    scopus 로고
    • Oxidative stress and inflammation response after nanoparticle exposure: differences between human lung cell monocultures and an advanced three-dimensional model of the human epithelial airways
    • Muller L., Riediker M., Wick P., Mohr M., Gehr P., Rothen-Rutishauser B. Oxidative stress and inflammation response after nanoparticle exposure: differences between human lung cell monocultures and an advanced three-dimensional model of the human epithelial airways. J. Royal Soc. Interface/Royal Soc. 2010, 1(Suppl. 7):S27-40.
    • (2010) J. Royal Soc. Interface/Royal Soc. , vol.1 , pp. S27-40
    • Muller, L.1    Riediker, M.2    Wick, P.3    Mohr, M.4    Gehr, P.5    Rothen-Rutishauser, B.6
  • 31
    • 1542271923 scopus 로고    scopus 로고
    • The utility of DNA microarrays for characterizing genotoxicity
    • Newton R.K., Aardema M., Aubrecht J. The utility of DNA microarrays for characterizing genotoxicity. Environ. Health Perspect. 2004, 112:420-422.
    • (2004) Environ. Health Perspect. , vol.112 , pp. 420-422
    • Newton, R.K.1    Aardema, M.2    Aubrecht, J.3
  • 33
    • 77149125903 scopus 로고    scopus 로고
    • Single- and multi-wall carbon nanotubes versus asbestos: are the carbon nanotubes a new health risk to humans?
    • Pacurari M., Castranova V., Vallyathan V. Single- and multi-wall carbon nanotubes versus asbestos: are the carbon nanotubes a new health risk to humans?. J. Toxicol. Environ. Health Part A 2010, 73:378-395.
    • (2010) J. Toxicol. Environ. Health Part A , vol.73 , pp. 378-395
    • Pacurari, M.1    Castranova, V.2    Vallyathan, V.3
  • 35
    • 84856133485 scopus 로고    scopus 로고
    • Cell permeability, migration, and reactive oxygen species induced by multiwalled carbon nanotubes in human microvascular endothelial cells
    • Pacurari M., Qian Y., Fu W., Schwegler-Berry D., Ding M., Castranova V., Guo N.L. Cell permeability, migration, and reactive oxygen species induced by multiwalled carbon nanotubes in human microvascular endothelial cells. J. Toxicol. Environ. Health Part A 2012, 75:112-128.
    • (2012) J. Toxicol. Environ. Health Part A , vol.75 , pp. 112-128
    • Pacurari, M.1    Qian, Y.2    Fu, W.3    Schwegler-Berry, D.4    Ding, M.5    Castranova, V.6    Guo, N.L.7
  • 36
    • 17844377872 scopus 로고    scopus 로고
    • Immortalization of human small airway epithelial cells by ectopic expression of telomerase
    • Piao C.Q., Liu L., Zhao Y.L., Balajee A.S., Suzuki M., Hei T.K. Immortalization of human small airway epithelial cells by ectopic expression of telomerase. Carcinogenesis 2005, 26:725-731.
    • (2005) Carcinogenesis , vol.26 , pp. 725-731
    • Piao, C.Q.1    Liu, L.2    Zhao, Y.L.3    Balajee, A.S.4    Suzuki, M.5    Hei, T.K.6
  • 40
    • 84897065959 scopus 로고    scopus 로고
    • Direct exposure at the air-liquid interface: evaluation of an in vitro approach for simulating inhalation of airborne substances
    • Rach J., Budde Mohle J., Aufderheide N.M. Direct exposure at the air-liquid interface: evaluation of an in vitro approach for simulating inhalation of airborne substances. J. Appl. Toxicol. 2014, 34:506-515.
    • (2014) J. Appl. Toxicol. , vol.34 , pp. 506-515
    • Rach, J.1    Budde Mohle, J.2    Aufderheide, N.M.3
  • 41
    • 10944239571 scopus 로고    scopus 로고
    • The sources of inflammatory mediators in the lung after silica exposure
    • Rao K.M., Porter D.W., Meighan T., Castranova V. The sources of inflammatory mediators in the lung after silica exposure. Environ. Health Perspect. 2004, 112:1679-1686.
    • (2004) Environ. Health Perspect. , vol.112 , pp. 1679-1686
    • Rao, K.M.1    Porter, D.W.2    Meighan, T.3    Castranova, V.4
  • 42
    • 51049107647 scopus 로고    scopus 로고
    • In vitro models of the human epithelial airway barrier to study the toxic potential of particulate matter
    • Rothen-Rutishauser B., Blank F., Muhlfeld C., Gehr P. In vitro models of the human epithelial airway barrier to study the toxic potential of particulate matter. Expert Opin. Drug Metab. Toxicol. 2008, 4:1075-1089.
    • (2008) Expert Opin. Drug Metab. Toxicol. , vol.4 , pp. 1075-1089
    • Rothen-Rutishauser, B.1    Blank, F.2    Muhlfeld, C.3    Gehr, P.4
  • 43
    • 42549092747 scopus 로고    scopus 로고
    • Overlapping genes in the human and mouse genomes
    • Sanna C.R., Li W.H., Zhang L. Overlapping genes in the human and mouse genomes. BMC Genomics 2008, 9:169.
    • (2008) BMC Genomics , vol.9 , pp. 169
    • Sanna, C.R.1    Li, W.H.2    Zhang, L.3
  • 45
    • 34548164647 scopus 로고    scopus 로고
    • Comparative pulmonary toxicity assessments of C60 water suspensions in rats: few differences in fullerene toxicity in vivo in contrast to in vitro profiles
    • Sayes C.M., Marchione A.A., Reed K.L., Warheit D.B. Comparative pulmonary toxicity assessments of C60 water suspensions in rats: few differences in fullerene toxicity in vivo in contrast to in vitro profiles. Nano Lett. 2007, 7:2399-2406.
    • (2007) Nano Lett. , vol.7 , pp. 2399-2406
    • Sayes, C.M.1    Marchione, A.A.2    Reed, K.L.3    Warheit, D.B.4
  • 46
    • 34347234840 scopus 로고    scopus 로고
    • Assessing toxicity of fine and nanoparticles: comparing in vitro measurements to in vivo pulmonary toxicity profiles
    • Sayes C.M., Reed K.L., Warheit D.B. Assessing toxicity of fine and nanoparticles: comparing in vitro measurements to in vivo pulmonary toxicity profiles. Toxicol. Sci. 2007, 97:163-180.
    • (2007) Toxicol. Sci. , vol.97 , pp. 163-180
    • Sayes, C.M.1    Reed, K.L.2    Warheit, D.B.3
  • 47
    • 34548555911 scopus 로고    scopus 로고
    • OMA browser-exploring orthologous relations across 352 complete genomes
    • Schneider A., Dessimoz C., Gonnet G.H. OMA browser-exploring orthologous relations across 352 complete genomes. Bioinformatics 2007, 23:2180-2182.
    • (2007) Bioinformatics , vol.23 , pp. 2180-2182
    • Schneider, A.1    Dessimoz, C.2    Gonnet, G.H.3
  • 48
    • 21244455507 scopus 로고    scopus 로고
    • In vitro versus in vivo exposure to combustion emissions
    • Seagrave J., McDonald J.D., Mauderly J.L. In vitro versus in vivo exposure to combustion emissions. Exp. Toxicol. Pathol. 2005, 57(Suppl. 1):233-238.
    • (2005) Exp. Toxicol. Pathol. , vol.57 , pp. 233-238
    • Seagrave, J.1    McDonald, J.D.2    Mauderly, J.L.3
  • 49
    • 3843067664 scopus 로고    scopus 로고
    • Human microvascular endothelial cells immortalized with human telomerase catalytic protein: a model for the study of in vitro angiogenesis
    • Shao R., Guo X. Human microvascular endothelial cells immortalized with human telomerase catalytic protein: a model for the study of in vitro angiogenesis. Biochem. Biophys. Res. Commun. 2004, 321:788-794.
    • (2004) Biochem. Biophys. Res. Commun. , vol.321 , pp. 788-794
    • Shao, R.1    Guo, X.2
  • 51
    • 76749129703 scopus 로고    scopus 로고
    • MSOAR 2.0: Incorporating tandem duplications into ortholog assignment based on genome rearrangement
    • Shi G., Zhang L., Jiang T. MSOAR 2.0: Incorporating tandem duplications into ortholog assignment based on genome rearrangement. BMC Bioinf. 2010, 11:10.
    • (2010) BMC Bioinf. , vol.11 , pp. 10
    • Shi, G.1    Zhang, L.2    Jiang, T.3
  • 54
    • 84871287600 scopus 로고    scopus 로고
    • New perspectives for in vitro risk assessment of multiwalled carbon nanotubes: application of coculture and bioinformatics
    • Snyder-Talkington B.N., Qian Y., Castranova V., Guo N.L. New perspectives for in vitro risk assessment of multiwalled carbon nanotubes: application of coculture and bioinformatics. J. Toxicol. Environ. Health. Part B. Crit. Rev. 2012, 15:468-492.
    • (2012) J. Toxicol. Environ. Health. Part B. Crit. Rev. , vol.15 , pp. 468-492
    • Snyder-Talkington, B.N.1    Qian, Y.2    Castranova, V.3    Guo, N.L.4
  • 55
    • 84880912858 scopus 로고    scopus 로고
    • Multi-walled carbon nanotubes induce human microvascular endothelial cellular effects in an alveolar-capillary co-culture with small airway epithelial cells
    • Snyder-Talkington B.N., Schwegler-Berry D., Castranova V., Qian Y., Guo N.L. Multi-walled carbon nanotubes induce human microvascular endothelial cellular effects in an alveolar-capillary co-culture with small airway epithelial cells. Part. Fibre Toxicol. 2013, 10:35.
    • (2013) Part. Fibre Toxicol. , vol.10 , pp. 35
    • Snyder-Talkington, B.N.1    Schwegler-Berry, D.2    Castranova, V.3    Qian, Y.4    Guo, N.L.5
  • 58
    • 39049174047 scopus 로고    scopus 로고
    • Establishment and therapeutic use of human embryonic stem cell lines
    • Suemori H. Establishment and therapeutic use of human embryonic stem cell lines. Human Cell 2006, 19:65-70.
    • (2006) Human Cell , vol.19 , pp. 65-70
    • Suemori, H.1
  • 59
    • 84890398283 scopus 로고    scopus 로고
    • Three human cell types respond to multi-walled carbon nanotubes and titanium dioxide nanobelts with cell-specific transcriptomic and proteomic expression patterns
    • Tilton S.C., Karin N.J., Tolic A., Xie Y., Lai X., Hamilton R.F., Waters K.M., Holian A., Witzmann F.A., Orr G. Three human cell types respond to multi-walled carbon nanotubes and titanium dioxide nanobelts with cell-specific transcriptomic and proteomic expression patterns. Nanotoxicology 2014, 8:533-548.
    • (2014) Nanotoxicology , vol.8 , pp. 533-548
    • Tilton, S.C.1    Karin, N.J.2    Tolic, A.3    Xie, Y.4    Lai, X.5    Hamilton, R.F.6    Waters, K.M.7    Holian, A.8    Witzmann, F.A.9    Orr, G.10
  • 60
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Bioconductor
    • Tusher V.G., Tibshirani R., Chu G. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Nat. Acad. Sci. U. S. A. 2001, 98:5116-5121. Bioconductor. http://www.bioconductor.org/.
    • (2001) Proc. Nat. Acad. Sci. U. S. A. , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3


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