메뉴 건너뛰기




Volumn 10, Issue 12, 2014, Pages

The HIV Mutation Browser: A Resource for Human Immunodeficiency Virus Mutagenesis and Polymorphism Data

Author keywords

[No Author keywords available]

Indexed keywords

DATA MINING; DISEASES; PROTEINS; VIRUSES;

EID: 84919681014     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1003951     Document Type: Article
Times cited : (22)

References (17)
  • 1
    • 38849204230 scopus 로고    scopus 로고
    • The first postmodern pandemic: 25 years of HIV/AIDS
    • Kallings LO, (2008) The first postmodern pandemic: 25 years of HIV/AIDS. J Intern Med Mar 263(3): 218–43.
    • (2008) J Intern Med Mar , vol.263 , pp. 218-243
    • Kallings, L.O.1
  • 2
    • 0037250521 scopus 로고    scopus 로고
    • Human immunodeficiency virus reverse transcriptase and protease sequence database
    • Rhee SY, Gonzales MJ, Kantor R, Betts BJ, Ravela J, et al. (2003) Human immunodeficiency virus reverse transcriptase and protease sequence database. Nucleic Acids Res Jan 1 31(1): 298–303.
    • (2003) Nucleic Acids Res Jan 1 , vol.31 , pp. 298-303
    • Rhee, S.Y.1    Gonzales, M.J.2    Kantor, R.3    Betts, B.J.4    Ravela, J.5
  • 3
    • 84891783174 scopus 로고    scopus 로고
    • Activities at the Universal Protein Resource (UniProt)
    • UniProt Consortium (2014) Activities at the Universal Protein Resource (UniProt). Nucleic Acids Res Jan;42(Database issue): D191–8.
    • (2014) Nucleic Acids Res Jan , vol.42 , pp. 191-198
  • 5
    • 34547879631 scopus 로고    scopus 로고
    • MutationFinder: a high-performance system for extracting point mutation mentions from text
    • Caporaso JG, Baumgartner WA, JrRandolph DA, Cohen KB, Hunter L, (2007) MutationFinder: a high-performance system for extracting point mutation mentions from text. Bioinformatics Jul 15;23(14): 1862–5.
    • (2007) Bioinformatics Jul , vol.15 , Issue.23 , pp. 1862-1865
    • Caporaso, J.G.1    Baumgartner, W.A.2    Randolph, D.A.3    Cohen, K.B.4    Hunter, L.5
  • 7
    • 79551581206 scopus 로고    scopus 로고
    • Toward an automatic method for extracting cancer- and other disease-related point mutations from the biomedical literature
    • Doughty E, Kertesz-Farkas A, Bodenreider O, Thompson G, Adadey A, et al. (2011) Toward an automatic method for extracting cancer- and other disease-related point mutations from the biomedical literature. Bioinformatics Feb 1;27(3): 408–15.
    • (2011) Bioinformatics Feb , vol.1 , Issue.27 , pp. 408-415
    • Doughty, E.1    Kertesz-Farkas, A.2    Bodenreider, O.3    Thompson, G.4    Adadey, A.5
  • 8
    • 78649772291 scopus 로고    scopus 로고
    • Algorithms and semantic infrastructure for mutation impact extraction and grounding
    • Laurila JB, Naderi N, Witte R, Riazanov A, Kouznetsov A, et al. (2010) Algorithms and semantic infrastructure for mutation impact extraction and grounding. BMC Genomics Dec 2;11 Suppl 4: S24.
    • (2010) BMC Genomics Dec , vol.2 , Issue.11 , pp. S24
    • Laurila, J.B.1    Naderi, N.2    Witte, R.3    Riazanov, A.4    Kouznetsov, A.5
  • 10
    • 67249157032 scopus 로고    scopus 로고
    • Vpu antagonizes BST-2-mediated restriction of HIV-1 release via beta-TrCP and endo-lysosomal trafficking
    • Mitchell RS, Katsura C, Skasko MA, Fitzpatrick K, Lau D, et al. (2009) Vpu antagonizes BST-2-mediated restriction of HIV-1 release via beta-TrCP and endo-lysosomal trafficking. PLoS Pathog May;5(5): e1000450.
    • (2009) PLoS Pathog May , vol.5 , pp. e1000450
    • Mitchell, R.S.1    Katsura, C.2    Skasko, M.A.3    Fitzpatrick, K.4    Lau, D.5
  • 11
    • 1242264326 scopus 로고    scopus 로고
    • Automatic extraction of mutations from Medline and cross-validation with OMIM
    • Rebholz-Schuhmann D, Marcel S, Albert S, Tolle R, Casari G, et al. (2004) Automatic extraction of mutations from Medline and cross-validation with OMIM. Nucleic Acids Res Jan 2;32(1): 135–42.
    • (2004) Nucleic Acids Res Jan , vol.2 , Issue.32 , pp. 135-142
    • Rebholz-Schuhmann, D.1    Marcel, S.2    Albert, S.3    Tolle, R.4    Casari, G.5
  • 12
    • 38049046226 scopus 로고    scopus 로고
    • Towards a systematic evaluation of protein mutation extraction systems
    • Witte R, Baker CJ, (2007) Towards a systematic evaluation of protein mutation extraction systems. J Bioinform Comput Biol Dec;5(6): 1339–59.
    • (2007) J Bioinform Comput Biol Dec , vol.5 , pp. 1339-1359
    • Witte, R.1    Baker, C.J.2
  • 13
    • 34547628246 scopus 로고    scopus 로고
    • Regulated degradation of the HIV-1 Vpu protein through a betaTrCP-independent pathway limits the release of viral particles
    • Estrabaud E, Le Rouzic E, Lopez-Vergès S, Morel M, Belaïdouni N, et al. (2007) Regulated degradation of the HIV-1 Vpu protein through a betaTrCP-independent pathway limits the release of viral particles. PLoS Pathog Jul 27;3(7): e104.
    • (2007) PLoS Pathog , vol.Jul 27;3 , pp. e104
    • Estrabaud, E.1    Le Rouzic, E.2    Lopez-Vergès, S.3    Morel, M.4    Belaïdouni, N.5
  • 14
    • 85116180129 scopus 로고    scopus 로고
    • Allie: a database and a search service of abbreviations and long forms
    • Yamamoto Y, Yamaguchi A, Bono H, Takagi T, (2011) Allie: a database and a search service of abbreviations and long forms. Database (Oxford) Apr 15;2011: bar013.
    • (2011) Database (Oxford) Apr , vol.15 , pp. bar013
    • Yamamoto, Y.1    Yamaguchi, A.2    Bono, H.3    Takagi, T.4
  • 15
    • 84875619226 scopus 로고    scopus 로고
    • MAFFT multiple sequence alignment software version 7: improvements in performance and usability
    • Katoh K, Standley DM, (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol Apr;30(4): 772–80.
    • (2013) Mol Biol Evol Apr , vol.30 , pp. 772-780
    • Katoh, K.1    Standley, D.M.2
  • 16
    • 14844342815 scopus 로고    scopus 로고
    • The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins
    • Dosztányi Z, Csizmók V, Tompa P, Simon I, (2005) The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins. J Mol Biol Apr 8;347(4): 827–39.
    • (2005) J Mol Biol Apr , vol.8 , Issue.347 , pp. 827-839
    • Dosztányi, Z.1    Csizmók, V.2    Tompa, P.3    Simon, I.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.