Quantitative trait loci analyses for resistance to Sclerotinia sclerotiorum and flowering time in Brassica napus

Molecular Breeding

Volumn 34, Issue 4, 2014, Pages 1797-1804

  Wei, Dayong ^a   Mei, Jiaqin ^a   Fu, Ying ^a   Disi, Joseph O ^a,b   Li, Jiana ^a   Qian, Wei ^a  

^a SOUTHWEST UNIVERSITY   (China)

^b AUBURN UNIVERSITY   (United States)

Author keywords

Brassica napus; Flowering time; Quantitative trait loci; Sclerotinia sclerotiorum

Indexed keywords

OILSEEDS;

BRASSICA NAPUS; DISEASE RESISTANCE; DOUBLED HAPLOID; FLOWERING-TIME; LOCI ANALYSIS; QUANTITATIVE TRAIT LOCUS; RESISTANCE TIME; SCLEROTINIA SCLEROTIORUM; SEED QUALITY; SEED YIELD;

PLANTS (BOTANY);

BRASSICA NAPUS; SCLEROTINIA SCLEROTIORUM;

EID: 84919577162     PISSN: 13803743     EISSN: 15729788     Source Type: Journal    
DOI: 10.1007/s11032-014-0139-7     Document Type: Article

References (29)

1. Basten CJ, Weir BS, Zeng ZB (2002) QTL cartographer, version 1.16. Department of Statistics, North Carolina State University, Raleigh
2. Butruille DV, Guries RP, Osborn TC (1999) Linkage analysis of molecular markers and quantitative trait loci in populations of inbred backcross lines of Brassica napus. Genetics 133:950–964
3. Delourme R, Falentin C, Fomeju BF, Boillot M, Lassalle G, Andre I, Duarte J, Gauthier V, Lucante N, Marty A, Pauchon M, Pichon JP, Ribiere N, Trotoux G, Blanchard P, Riviere N, Martinant JP, Pauquet J (2013) High-density SNP-based genetic map development and linkage disequilibrium assessment in Brassica napus L. BMC Genom 14:120
4. Doerge RW, Churchill GA (1996) Permutation tests for multiple loci affecting a quantitative character. Genetics 142:285–294
5. Hallauer AR, Miranda FJB (1988) Quantitative genetics in maize breeding, 2nd edn. Iowa State University Press, Ames, p 468
6. Hind TL, Lewington F (2004) Canola concepts: managing sclerotinia. New South Wales Agriculture Agnote DPI-490. NSW Department of Primary Industries
7. Koch S, Dunker S, Kleinhenz B, Rohrig M, Tiedemann A (2007) A crop loss-related forecasting model for Sclerotinia stem rot in winter oilseed rape. Phytopathology 97:1186–1194
8. Kolkman JM, Kelly JD (2003) QTL conferring resistance and avoidance to white mold in common bean. Crop Sci 43:539–548
9. Lander ES, Botstein D (1989) Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121:185–199
10. Liu S, Liu Y, Yang X, Tong C et al (2014) The Brassica oleracea genome reveals the asymmetrical evolution polyploid genomes. Nat Commun 5:3930
11. Long Y, Shi JQ, Qiu D, Li R, Zhang C, Wang J, Hou J, Zhao J, Choi SR, Lim YP, Meng JL (2007) Flowering time quantitative trait loci analysis of oilseed Brassica in multiple environments and genome wide alignment with Arabidopsis. Genetics 177:2433–2444
12. Lowe AJ, Moule C, Trick M, Edwards KJ (2004) Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species. Theor Appl Genet 108:1103–1112
13. Malvarez G, Carbone I, Grunwald NJ, Subbarao KV, Schafer M, Kohn LM (2007) New Populations of Sclerotinia sclerotiorum from Lettuce in California and Peas and Lentils in Washington. Phytopathology 97:470–483
14. Mei J, Qian L, Disi JO, Yang X, Li Q, Li J, Frauen M, Cai D, Qian W (2011) Identification of resistant sources against Sclerotinia sclerotiorum in Brassica crops with emphasis on B. oleracea. Euphytica 177:393–400
15. Mei JQ, Wei DY, Disi JO, Ding YJ, Liu Y, Qian W (2012) Screening resistance against Sclerotinia sclerotiorum in Brassica crops with use of detached stem assay under controlled environment. Eur J Plant Pathol 134:599–604
16. Mei JQ, Ding YJ, Lu K, Wei DY, Liu Y, Disi JO, Li JN, Liu LZ, Liu SY, McKay J, Qian W (2013) Identification of genomic regions involved in resistance against Sclerotinia sclerotiorum from wild Brassica oleracea. Theor Appl Genet 126:549–556
17. Piquemal J, Cinquin E, Couton F, Rondeau C, Seignoret E, Doucet I, Perret D, Villeger MJ, Vincourt P, Blanchard P (2005) Construction of an oilseed rape (Brassica napus L.) genetic map with SSR markers. Theor Appl Genet 111:1514–1523
18. Qiu D, Gao M, Li G, Quiros C (2009) Comparative sequence analysis for Brassica oleracea with similar sequences in B. rapa and Arabidopsis thaliana. Plant Cell Rep 28:649–661
19. Raman H, Raman R, Kilian A, Detering F, Long Y, Edwards D, Parkin IA, Sharpe AG, Nelson MN, Larkan N, Zou J, Meng J, Aslam MN, Batley J, Cowling WA, Lydiate D (2013) A consensus map of rapeseed (Brassica napus L.) based on diversity array technology markers: applications in genetic dissection of qualitative and quantitative traits. BMC Genom 14:277
20. SAS Institute (1992) SAS technical report. SAS statistics software: changes and enhancements. Release 6.07
21. Shi JQ, Li RY, Qiu D, Jiang CC, Long Y, Morgan C, Bancroft I, Zhao JY, Meng JL (2009) Unraveling the complex trait of crop yield with quantitative trait loci mapping in Brassica napus. Genetics 182:851–861
22. Singh R, Singh D, Salisbury P, Barbetti MJ (2010) Field evaluation of Indian and exotic oilseed Brassica napus and B. juncea germplasm against Sclerotinia stem rot. Ind J Agric Sci 80:1067–1071
23. Turkington TK, Morrall RAA (1993) Use of petal infestation to forecast Sclerotinia stem rot of canola: the influence of inoculum variation over the flowering period and canopy density. Phytopathology 83:682–689
24. Voorrips R (2002) MapChart: software for the graphical presentation of linkage maps and QTLs. J Hered 93:77–78
25. Wang X, Wang H, Wang J, Sun R et al (2011) The genome of the mesopolyploid crop species Brassica rapa. Nat Genet 43(10):1035–1039
26. Wu J, Cai G, Tu J, Li L, Liu S, Luo X, Zhou L, Fan C, Zhou Y (2013) Identification of QTLs for resistance to sclerotinia stem rot and BnaC.IGMT5.a as a candidate gene of the major resistant QTL SRC6 in Brassica napus. PLoS ONE 8(7):e67740
27. Yin XR, Yi B, Chen W, Zhang WJ, Tu JX, Fernando WGD, Fu TD (2010) Mapping of QTLs detected in a Brassica napus DH population for resistance to Sclerotinia sclerotiorum in multiple environments. Euphytica 173:25–35
28. Zhao JW, Meng JL (2003) Genetic analysis of loci associated with partial resistance to Sclerotinia sclerotiorum in rapeseed (Brassica napus L.). Theor Appl Genet 106:759–764
29. Zhao JW, Udall JA, Quijada PA, Grau CR, Meng JL, Osborn TC (2006) Quantitative trait loci for resistance to Sclerotinia sclerotiorum and its association with a homeologous non-reciprocal transposition in Brassica napus L. Theor Appl Genet 112:509–516