-
2
-
-
1642547063
-
The evolution of C4 photosynthesis
-
Sage R.F. The evolution of C4 photosynthesis. N. Phytol. 2004, 161:341-370.
-
(2004)
N. Phytol.
, vol.161
, pp. 341-370
-
-
Sage, R.F.1
-
3
-
-
0000808565
-
Photosynthetic and photorespiratory characteristics of Flaveria species
-
Ku M.S., Wu J., Dai Z., Scott R.A., Chu C., Edwards G.E. Photosynthetic and photorespiratory characteristics of Flaveria species. Plant Physiol. 1991, 96:518-528.
-
(1991)
Plant Physiol.
, vol.96
, pp. 518-528
-
-
Ku, M.S.1
Wu, J.2
Dai, Z.3
Scott, R.A.4
Chu, C.5
Edwards, G.E.6
-
4
-
-
18144402446
-
The future of C4 research - maize, Flaveria or Cleome?
-
Brown N.J., Parsley K., Hibberd J.M. The future of C4 research - maize, Flaveria or Cleome?. Trends Plant Sci. 2005, 10:215-221.
-
(2005)
Trends Plant Sci.
, vol.10
, pp. 215-221
-
-
Brown, N.J.1
Parsley, K.2
Hibberd, J.M.3
-
5
-
-
34548131215
-
Cleome: a genus closely related to Arabidopsis, contains species spanning a developmental progression from C3 to C4 photosynthesis
-
Marshall D.M., Muhaidat R., Brown N.J., Liu Z., Stanley S., Griffiths H., Sage R.F., Hibberd J.M. Cleome: a genus closely related to Arabidopsis, contains species spanning a developmental progression from C3 to C4 photosynthesis. Plant J. 2007, 51:886-896.
-
(2007)
Plant J.
, vol.51
, pp. 886-896
-
-
Marshall, D.M.1
Muhaidat, R.2
Brown, N.J.3
Liu, Z.4
Stanley, S.5
Griffiths, H.6
Sage, R.F.7
Hibberd, J.M.8
-
6
-
-
77952533806
-
Improving photosynthetic efficiency for greater yield
-
Zhu X.-G., Long S.P., Ort D.R. Improving photosynthetic efficiency for greater yield. Annu. Rev. Plant Biol. 2010, 61:235-261.
-
(2010)
Annu. Rev. Plant Biol.
, vol.61
, pp. 235-261
-
-
Zhu, X.-G.1
Long, S.P.2
Ort, D.R.3
-
8
-
-
77958136134
-
Vein patterning and evolution in C4 plants
-
McKown A.D., Dengler N.G. Vein patterning and evolution in C4 plants. Botany 2010, 88:775-786.
-
(2010)
Botany
, vol.88
, pp. 775-786
-
-
McKown, A.D.1
Dengler, N.G.2
-
9
-
-
84911393351
-
Three distinct biochemical subtypes of C4 photosynthesis? A modelling analysis
-
Wang Y., Bräutigam A., Weber A.P.M., Zhu X.-G. Three distinct biochemical subtypes of C4 photosynthesis? A modelling analysis. J. Exp. Bot. 2014, 65:3567-3578.
-
(2014)
J. Exp. Bot.
, vol.65
, pp. 3567-3578
-
-
Wang, Y.1
Bräutigam, A.2
Weber, A.P.M.3
Zhu, X.-G.4
-
11
-
-
78650984200
-
An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species
-
Bräutigam A., Kajala K., Wullenweber J., Sommer M., Gagneul D., Weber K.L., Carr K.M., Gowik U., Maß J., Lercher M.J. An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species. Plant Physiol. 2011, 155:142-156.
-
(2011)
Plant Physiol.
, vol.155
, pp. 142-156
-
-
Bräutigam, A.1
Kajala, K.2
Wullenweber, J.3
Sommer, M.4
Gagneul, D.5
Weber, K.L.6
Carr, K.M.7
Gowik, U.8
Maß, J.9
Lercher, M.J.10
-
12
-
-
79952782469
-
Independent and parallel recruitment of preexisting mechanisms underlying C4 photosynthesis
-
Brown N.J., Newell C.A., Stanley S., Chen J.E., Perrin A.J., Kajala K., Hibberd J.M. Independent and parallel recruitment of preexisting mechanisms underlying C4 photosynthesis. Science 2011, 331:1436-1439.
-
(2011)
Science
, vol.331
, pp. 1436-1439
-
-
Brown, N.J.1
Newell, C.A.2
Stanley, S.3
Chen, J.E.4
Perrin, A.J.5
Kajala, K.6
Hibberd, J.M.7
-
13
-
-
77952483338
-
The regulation of gene expression required for C4 photosynthesis
-
Hibberd J.M., Covshoff S. The regulation of gene expression required for C4 photosynthesis. Annu. Rev. Plant Biol. 2010, 61:181-207.
-
(2010)
Annu. Rev. Plant Biol.
, vol.61
, pp. 181-207
-
-
Hibberd, J.M.1
Covshoff, S.2
-
14
-
-
84355162134
-
Multiple Arabidopsis genes primed for recruitment into C4 photosynthesis
-
Kajala K., Brown N.J., Williams B.P., Borrill P., Taylor L.E., Hibberd J.M. Multiple Arabidopsis genes primed for recruitment into C4 photosynthesis. Plant J. 2012, 69:47-56.
-
(2012)
Plant J.
, vol.69
, pp. 47-56
-
-
Kajala, K.1
Brown, N.J.2
Williams, B.P.3
Borrill, P.4
Taylor, L.E.5
Hibberd, J.M.6
-
16
-
-
0001729828
-
The origins of C4 genes and evolutionary pattern in the C4 metabolic phenotype
-
San Diego, Academic Press (Ed.)
-
Monson R.K.S., Rowan F. The origins of C4 genes and evolutionary pattern in the C4 metabolic phenotype. C4 Plant Biology 1999, 377-410. San Diego. Academic Press (Ed.).
-
(1999)
C4 Plant Biology
, pp. 377-410
-
-
Monson, R.K.S.1
Rowan, F.2
-
17
-
-
84907452036
-
Comparative Transcriptome Atlases Reveal Altered Gene Expression Modules between Two Cleomaceae C3 and C4 Plant Species
-
Advance online publication
-
Külahoglu C., Denton A.K., Sommer M., Maß J., Schliesky S., Wrobel T.J., Berckmans B., Gongora-Castillo E., Buell C.R., Simon R., et al. Comparative Transcriptome Atlases Reveal Altered Gene Expression Modules between Two Cleomaceae C3 and C4 Plant Species. The Plant Cell Online 2014, Advance online publication. 10.1105/tpc.114.123752.
-
(2014)
The Plant Cell Online
-
-
Külahoglu, C.1
Denton, A.K.2
Sommer, M.3
Maß, J.4
Schliesky, S.5
Wrobel, T.J.6
Berckmans, B.7
Gongora-Castillo, E.8
Buell, C.R.9
Simon, R.10
-
18
-
-
84870799409
-
Scarecrow plays a role in establishing Kranz anatomy in maize leaves
-
Slewinski T.L., Anderson A.A., Zhang C., Turgeon R. Scarecrow plays a role in establishing Kranz anatomy in maize leaves. Plant Cell Physiol. 2012, 53:2030-2037.
-
(2012)
Plant Cell Physiol.
, vol.53
, pp. 2030-2037
-
-
Slewinski, T.L.1
Anderson, A.A.2
Zhang, C.3
Turgeon, R.4
-
19
-
-
84906241924
-
Short-root1 plays a role in the development of vascular tissue and Kranz anatomy in maize leaves
-
Slewinski T.L., Anderson A.A., Price S., Withee J.R., Gallagher K., Turgeon R. Short-root1 plays a role in the development of vascular tissue and Kranz anatomy in maize leaves. Mol. Plant 2014, 7:1388-1392.
-
(2014)
Mol. Plant
, vol.7
, pp. 1388-1392
-
-
Slewinski, T.L.1
Anderson, A.A.2
Price, S.3
Withee, J.R.4
Gallagher, K.5
Turgeon, R.6
-
20
-
-
84882454973
-
Genome-wide transcript analysis of early maize leaf development reveals gene cohorts associated with the differentiation of C4 Kranz anatomy
-
Wang P., Kelly S., Fouracre J.P., Langdale J.A. Genome-wide transcript analysis of early maize leaf development reveals gene cohorts associated with the differentiation of C4 Kranz anatomy. Plant J. 2013, 75:656-670.
-
(2013)
Plant J.
, vol.75
, pp. 656-670
-
-
Wang, P.1
Kelly, S.2
Fouracre, J.P.3
Langdale, J.A.4
-
21
-
-
2942620598
-
The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana
-
Cannon S.B., Mitra A., Baumgarten A., Young N.D., May G. The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana. BMC Plant Biol. 2004, 4:10.
-
(2004)
BMC Plant Biol.
, vol.4
, pp. 10
-
-
Cannon, S.B.1
Mitra, A.2
Baumgarten, A.3
Young, N.D.4
May, G.5
-
22
-
-
70349682921
-
Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes
-
Edger P., Pires J.C. Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes. Chromosome Res. 2009, 17:699-717.
-
(2009)
Chromosome Res.
, vol.17
, pp. 699-717
-
-
Edger, P.1
Pires, J.C.2
-
23
-
-
79953703428
-
Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication
-
Coate J.E., Schlueter J.A., Whaley A.M., Doyle J.J. Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication. Plant Physiol. 2011, 155:2081-2095.
-
(2011)
Plant Physiol.
, vol.155
, pp. 2081-2095
-
-
Coate, J.E.1
Schlueter, J.A.2
Whaley, A.M.3
Doyle, J.J.4
-
24
-
-
67650754167
-
Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses
-
Wang X., Gowik U., Tang H., Bowers J.E., Westhoff P., Paterson A.H. Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses. Genome Biol. 2009, 10:R68.
-
(2009)
Genome Biol.
, vol.10
, pp. R68
-
-
Wang, X.1
Gowik, U.2
Tang, H.3
Bowers, J.E.4
Westhoff, P.5
Paterson, A.H.6
-
25
-
-
78650378332
-
Biogeographic patterns of diversification and the origins of C4 in Cleome (Cleomaceae)
-
Feodorova T.A., Voznesenskaya E.V., Edwards G.E., Roalson E.H. Biogeographic patterns of diversification and the origins of C4 in Cleome (Cleomaceae). Syst. Bot. 2010, 35:811-826.
-
(2010)
Syst. Bot.
, vol.35
, pp. 811-826
-
-
Feodorova, T.A.1
Voznesenskaya, E.V.2
Edwards, G.E.3
Roalson, E.H.4
-
26
-
-
34247327424
-
Physiological, anatomical and biochemical characterisation of photosynthetic types in genus Cleome (Cleomaceae)
-
Voznesenskaya E.V., Koteyeva N.K., Chuong S.D., Ivanova A.N., Barroca J., Craven L.A., Edwards G.E. Physiological, anatomical and biochemical characterisation of photosynthetic types in genus Cleome (Cleomaceae). Funct. Plant Biol. 2007, 34:247-267.
-
(2007)
Funct. Plant Biol.
, vol.34
, pp. 247-267
-
-
Voznesenskaya, E.V.1
Koteyeva, N.K.2
Chuong, S.D.3
Ivanova, A.N.4
Barroca, J.5
Craven, L.A.6
Edwards, G.E.7
-
27
-
-
67649128640
-
A model plant for a biology curriculum: spider flower (Cleome hasslerana L.)
-
Marquard R.D., Steinback R. A model plant for a biology curriculum: spider flower (Cleome hasslerana L.). Am. Biol. Teach. 2009, 71:235-244.
-
(2009)
Am. Biol. Teach.
, vol.71
, pp. 235-244
-
-
Marquard, R.D.1
Steinback, R.2
-
28
-
-
77949523463
-
Paleopolyploidy in the Brassicales: analyses of the cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales
-
Barker M.S., Vogel H., Schranz M.E. Paleopolyploidy in the Brassicales: analyses of the cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales. Genome Biol. Evol. 2009, 1:391-399.
-
(2009)
Genome Biol. Evol.
, vol.1
, pp. 391-399
-
-
Barker, M.S.1
Vogel, H.2
Schranz, M.E.3
-
29
-
-
84884678887
-
The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers
-
Cheng S., van den Bergh E., Zeng P., Zhong X., Xu J., Liu X., Hofberger J., de Bruijn S., Bhide A.S., Kuelahoglu C. The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers. Plant Cell Online 2013, 25:2813-2830.
-
(2013)
Plant Cell Online
, vol.25
, pp. 2813-2830
-
-
Cheng, S.1
van den Bergh, E.2
Zeng, P.3
Zhong, X.4
Xu, J.5
Liu, X.6
Hofberger, J.7
de Bruijn, S.8
Bhide, A.S.9
Kuelahoglu, C.10
-
30
-
-
0036226603
-
BLAT - the BLAST-like alignment tool
-
Kent W.J. BLAT - the BLAST-like alignment tool. Genome Res. 2002, 12:656-664.
-
(2002)
Genome Res.
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
31
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schäffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
32
-
-
84873174617
-
Decoding plant and animal genome plasticity from differential paleo-evolutionary patterns and processes
-
Murat F., Van de Peer Y., Salse J. Decoding plant and animal genome plasticity from differential paleo-evolutionary patterns and processes. Genome Biol. Evol. 2012, 4:917-928.
-
(2012)
Genome Biol. Evol.
, vol.4
, pp. 917-928
-
-
Murat, F.1
Van de Peer, Y.2
Salse, J.3
-
33
-
-
24044447664
-
Automated generation of heuristics for biological sequence comparison
-
Slater G.S., Birney E. Automated generation of heuristics for biological sequence comparison. BMC Bioinform. 2005, 6:31.
-
(2005)
BMC Bioinform.
, vol.6
, pp. 31
-
-
Slater, G.S.1
Birney, E.2
-
34
-
-
0030683599
-
PAML: a program package for phylogenetic analysis by maximum likelihood
-
Yang Z. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 1997, 13:555-556.
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
35
-
-
78650560030
-
EvoPipes.net. Bioinformatic tools for ecological and evolutionary genomics
-
Barker M.S., Dlugosch K.M., Dinh L., Challa R.S., Kane N.C., King M.G., Rieseberg L.H. EvoPipes.net. Bioinformatic tools for ecological and evolutionary genomics. Evol. Bioinform. 2010, 6:143-149.
-
(2010)
Evol. Bioinform.
, vol.6
, pp. 143-149
-
-
Barker, M.S.1
Dlugosch, K.M.2
Dinh, L.3
Challa, R.S.4
Kane, N.C.5
King, M.G.6
Rieseberg, L.H.7
-
36
-
-
38949151064
-
How to usefully compare homologous plant genes and chromosomes as DNA sequences
-
Lyons E., Freeling M. How to usefully compare homologous plant genes and chromosomes as DNA sequences. Plant J. 2008, 53:661-673.
-
(2008)
Plant J.
, vol.53
, pp. 661-673
-
-
Lyons, E.1
Freeling, M.2
-
37
-
-
84881028642
-
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions
-
(advance online publication)
-
Haudry A., Platts A.E., Vello E., Hoen D.R., Leclercq M., Williamson R.J., Forczek E., Joly-Lopez Z., Steffen J.G., Hazzouri K.M., et al. An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nat. Genet. 2013, 45:891-898. (advance online publication).
-
(2013)
Nat. Genet.
, vol.45
, pp. 891-898
-
-
Haudry, A.1
Platts, A.E.2
Vello, E.3
Hoen, D.R.4
Leclercq, M.5
Williamson, R.J.6
Forczek, E.7
Joly-Lopez, Z.8
Steffen, J.G.9
Hazzouri, K.M.10
-
38
-
-
77949523463
-
Paleopolyploidy in the Brassicales: analyses of the Cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales
-
Barker M.S., Vogel H., Schranz M.E. Paleopolyploidy in the Brassicales: analyses of the Cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales. Genome Biol. Evol. 2009, 1:391.
-
(2009)
Genome Biol. Evol.
, vol.1
, pp. 391
-
-
Barker, M.S.1
Vogel, H.2
Schranz, M.E.3
-
39
-
-
2442503642
-
Cis-Regulatory elements for mesophyll-specific gene expression in the C4 plant Flaveria trinervia, the promoter of the C4 phosphoenolpyruvate carboxylase gene
-
Gowik U., Burscheidt J., Akyildiz M., Schlue U., Koczor M., Streubel M., Westhoff P. cis-Regulatory elements for mesophyll-specific gene expression in the C4 plant Flaveria trinervia, the promoter of the C4 phosphoenolpyruvate carboxylase gene. Plant Cell Online 2004, 16:1077-1090.
-
(2004)
Plant Cell Online
, vol.16
, pp. 1077-1090
-
-
Gowik, U.1
Burscheidt, J.2
Akyildiz, M.3
Schlue, U.4
Koczor, M.5
Streubel, M.6
Westhoff, P.7
-
40
-
-
0014237181
-
Evolution from fish to mammals by gene duplication
-
Ohno S., Wolf U., Atkin N.B. Evolution from fish to mammals by gene duplication. Hereditas 1968, 59:169-187.
-
(1968)
Hereditas
, vol.59
, pp. 169-187
-
-
Ohno, S.1
Wolf, U.2
Atkin, N.B.3
-
41
-
-
78650978866
-
The path from C3 to C4 photosynthesis
-
Gowik U., Westhoff P. The path from C3 to C4 photosynthesis. Plant Physiol. 2011, 155:56-63.
-
(2011)
Plant Physiol.
, vol.155
, pp. 56-63
-
-
Gowik, U.1
Westhoff, P.2
-
42
-
-
84859632749
-
Molecular evolution of genes recruited into C4 photosynthesis
-
Williams B.P., Aubry S., Hibberd J.M. Molecular evolution of genes recruited into C4 photosynthesis. Trends Plant Sci. 2012, 17:213-220.
-
(2012)
Trends Plant Sci.
, vol.17
, pp. 213-220
-
-
Williams, B.P.1
Aubry, S.2
Hibberd, J.M.3
-
43
-
-
38549144806
-
The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
-
Lamesch P., Berardini T.Z., Li D., Swarbreck D., Wilks C., Sasidharan R., Muller R., Dreher K., Alexander D.L., Garcia-Hernandez M., et al. The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools. Nucleic Acids Res. 2011, 36:D1009-D1014.
-
(2011)
Nucleic Acids Res.
, vol.36
, pp. D1009-D1014
-
-
Lamesch, P.1
Berardini, T.Z.2
Li, D.3
Swarbreck, D.4
Wilks, C.5
Sasidharan, R.6
Muller, R.7
Dreher, K.8
Alexander, D.L.9
Garcia-Hernandez, M.10
|