메뉴 건너뛰기




Volumn 77, Issue , 2015, Pages 17-27

Degenerate primer MOB typing of multiresistant clinical isolates of E. coli uncovers new plasmid backbones

Author keywords

Antibiotic resistance dissemination; Bacterial conjugation; Degenerate Primer MOB typing; Integrative and conjugative elements; PCR based replicon typing; Plasmid

Indexed keywords

EXTENDED SPECTRUM BETA LACTAMASE; PLASMID DNA; BETA LACTAMASE; PRIMER DNA;

EID: 84916910826     PISSN: 0147619X     EISSN: 10959890     Source Type: Journal    
DOI: 10.1016/j.plasmid.2014.11.003     Document Type: Article
Times cited : (13)

References (35)
  • 2
    • 84863856890 scopus 로고    scopus 로고
    • A degenerate primer MOB typing (DPMT) method to classify gamma-proteobacterial plasmids in clinical and environmental settings
    • Alvarado A., Garcillan-Barcia M.P., de la Cruz F. A degenerate primer MOB typing (DPMT) method to classify gamma-proteobacterial plasmids in clinical and environmental settings. PLoS ONE 2012, 7:e40438.
    • (2012) PLoS ONE , vol.7 , pp. e40438
    • Alvarado, A.1    Garcillan-Barcia, M.P.2    de la Cruz, F.3
  • 3
    • 67650710749 scopus 로고    scopus 로고
    • All IncP-1 plasmid subgroups, including the novel epsilon subgroup, are prevalent in the influent of a Danish wastewater treatment plant
    • Bahl M.I., Burmolle M., Meisner A., Hansen L.H., Sorensen S.J. All IncP-1 plasmid subgroups, including the novel epsilon subgroup, are prevalent in the influent of a Danish wastewater treatment plant. Plasmid 2009, 62:134-139.
    • (2009) Plasmid , vol.62 , pp. 134-139
    • Bahl, M.I.1    Burmolle, M.2    Meisner, A.3    Hansen, L.H.4    Sorensen, S.J.5
  • 6
    • 77950548092 scopus 로고    scopus 로고
    • Modulation of ColE1-like plasmid replication for recombinant gene expression
    • Camps M. Modulation of ColE1-like plasmid replication for recombinant gene expression. Recent Pat. DNA Gene Seq 2010, 4:58-73.
    • (2010) Recent Pat. DNA Gene Seq , vol.4 , pp. 58-73
    • Camps, M.1
  • 7
    • 67049109154 scopus 로고    scopus 로고
    • Resistance plasmid families in Enterobacteriaceae
    • Carattoli A. Resistance plasmid families in Enterobacteriaceae. Antimicrob. Agents Chemother 2009, 53:2227-2238.
    • (2009) Antimicrob. Agents Chemother , vol.53 , pp. 2227-2238
    • Carattoli, A.1
  • 9
    • 38149001376 scopus 로고    scopus 로고
    • Molecular epidemiology of Escherichia coli producing extended-spectrum beta-lactamases isolated in Rome, Italy
    • Carattoli A., Garcia-Fernandez A., Varesi P., Fortini D., Gerardi S., Penni A., et al. Molecular epidemiology of Escherichia coli producing extended-spectrum beta-lactamases isolated in Rome, Italy. J. Clin. Microbiol 2008, 46:103-108.
    • (2008) J. Clin. Microbiol , vol.46 , pp. 103-108
    • Carattoli, A.1    Garcia-Fernandez, A.2    Varesi, P.3    Fortini, D.4    Gerardi, S.5    Penni, A.6
  • 10
    • 77957224269 scopus 로고    scopus 로고
    • Complete nucleotide sequence of the IncN plasmid pKOX105 encoding VIM-1, QnrS1 and SHV-12 proteins in Enterobacteriaceae from Bolzano, Italy compared with IncN plasmids encoding KPC enzymes in the USA
    • Carattoli A., Aschbacher R., March A., Larcher C., Livermore D.M., Woodford N. Complete nucleotide sequence of the IncN plasmid pKOX105 encoding VIM-1, QnrS1 and SHV-12 proteins in Enterobacteriaceae from Bolzano, Italy compared with IncN plasmids encoding KPC enzymes in the USA. J. Antimicrob. Chemother 2010, 65:2070-2075.
    • (2010) J. Antimicrob. Chemother , vol.65 , pp. 2070-2075
    • Carattoli, A.1    Aschbacher, R.2    March, A.3    Larcher, C.4    Livermore, D.M.5    Woodford, N.6
  • 12
    • 77955620305 scopus 로고    scopus 로고
    • In vivo selection of aac(6')-Ib-cr and mutations in the gyrA gene in a clinical qnrS1-positive Salmonella enterica serovar Typhimurium DT104B strain recovered after fluoroquinolone treatment
    • de Toro M., Rojo-Bezares B., Vinue L., Undabeitia E., Torres C., Saenz Y. In vivo selection of aac(6')-Ib-cr and mutations in the gyrA gene in a clinical qnrS1-positive Salmonella enterica serovar Typhimurium DT104B strain recovered after fluoroquinolone treatment. J. Antimicrob. Chemother 2010, 65:1945-1949.
    • (2010) J. Antimicrob. Chemother , vol.65 , pp. 1945-1949
    • de Toro, M.1    Rojo-Bezares, B.2    Vinue, L.3    Undabeitia, E.4    Torres, C.5    Saenz, Y.6
  • 14
    • 84858689015 scopus 로고    scopus 로고
    • Characterization of plasmids encoding extended-spectrum beta-lactamases and their addiction systems circulating among Escherichia coli clinical isolates in the UK
    • Doumith M., Dhanji H., Ellington M.J., Hawkey P., Woodford N. Characterization of plasmids encoding extended-spectrum beta-lactamases and their addiction systems circulating among Escherichia coli clinical isolates in the UK. J. Antimicrob. Chemother 2012, 67:878-885.
    • (2012) J. Antimicrob. Chemother , vol.67 , pp. 878-885
    • Doumith, M.1    Dhanji, H.2    Ellington, M.J.3    Hawkey, P.4    Woodford, N.5
  • 17
    • 84916912951 scopus 로고    scopus 로고
    • Ordering the bestiary of genetic elements transmissible by conjugation
    • Garcillan-Barcia M.P., de la Cruz F. Ordering the bestiary of genetic elements transmissible by conjugation. Mob. Genet Elem 2013, 3:e24263.
    • (2013) Mob. Genet Elem , vol.3 , pp. e24263
    • Garcillan-Barcia, M.P.1    de la Cruz, F.2
  • 18
    • 64349087867 scopus 로고    scopus 로고
    • The diversity of conjugative relaxases and its application in plasmid classification
    • Garcillan-Barcia M.P., Francia M.V., de la Cruz F. The diversity of conjugative relaxases and its application in plasmid classification. FEMS Microbiol. Rev 2009, 33:657-687.
    • (2009) FEMS Microbiol. Rev , vol.33 , pp. 657-687
    • Garcillan-Barcia, M.P.1    Francia, M.V.2    de la Cruz, F.3
  • 19
    • 79960966271 scopus 로고    scopus 로고
    • Identification of bacterial plasmids based on mobility and plasmid population biology
    • Garcillan-Barcia M.P., Alvarado A., de la Cruz F. Identification of bacterial plasmids based on mobility and plasmid population biology. FEMS Microbiol. Rev 2011, 35:936-956.
    • (2011) FEMS Microbiol. Rev , vol.35 , pp. 936-956
    • Garcillan-Barcia, M.P.1    Alvarado, A.2    de la Cruz, F.3
  • 20
    • 80052333445 scopus 로고    scopus 로고
    • The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation
    • Guglielmini J., Quintais L., Garcillan-Barcia M.P., de la Cruz F., Rocha E.P. The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation. PLoS Genet 2011, 7:e1002222.
    • (2011) PLoS Genet , vol.7 , pp. e1002222
    • Guglielmini, J.1    Quintais, L.2    Garcillan-Barcia, M.P.3    de la Cruz, F.4    Rocha, E.P.5
  • 21
    • 79959306747 scopus 로고    scopus 로고
    • Antibiotic resistance gene spread due to manure application on agricultural fields
    • Heuer H., Schmitt H., Smalla K. Antibiotic resistance gene spread due to manure application on agricultural fields. Curr. Opin. Microbiol 2011, 14:236-243.
    • (2011) Curr. Opin. Microbiol , vol.14 , pp. 236-243
    • Heuer, H.1    Schmitt, H.2    Smalla, K.3
  • 22
    • 84861749911 scopus 로고    scopus 로고
    • Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant Enterobacteriaceae
    • Johnson T.J., Bielak E.M., Fortini D., Hansen L.H., Hasman H., Debroy C., et al. Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant Enterobacteriaceae. Plasmid 2012, 68:43-50.
    • (2012) Plasmid , vol.68 , pp. 43-50
    • Johnson, T.J.1    Bielak, E.M.2    Fortini, D.3    Hansen, L.H.4    Hasman, H.5    Debroy, C.6
  • 23
    • 84904659449 scopus 로고    scopus 로고
    • Bringing them together: plasmid pMV158 rolling circle replication and conjugation under an evolutionary perspective
    • Lorenzo-Diaz F., Fernandez-Lopez C., Garcillan-Barcia M.P., Espinosa M. Bringing them together: plasmid pMV158 rolling circle replication and conjugation under an evolutionary perspective. Plasmid 2014, 74:15-31.
    • (2014) Plasmid , vol.74 , pp. 15-31
    • Lorenzo-Diaz, F.1    Fernandez-Lopez, C.2    Garcillan-Barcia, M.P.3    Espinosa, M.4
  • 24
    • 84859208830 scopus 로고    scopus 로고
    • Plasmid typing and genetic context of AmpC beta-lactamases in Enterobacteriaceae lacking inducible chromosomal ampC genes: findings from a Spanish hospital 1999-2007
    • Mata C., Miro E., Alvarado A., Garcillan-Barcia M.P., Toleman M., Walsh T.R., et al. Plasmid typing and genetic context of AmpC beta-lactamases in Enterobacteriaceae lacking inducible chromosomal ampC genes: findings from a Spanish hospital 1999-2007. J. Antimicrob. Chemother 2012, 67:115-122.
    • (2012) J. Antimicrob. Chemother , vol.67 , pp. 115-122
    • Mata, C.1    Miro, E.2    Alvarado, A.3    Garcillan-Barcia, M.P.4    Toleman, M.5    Walsh, T.R.6
  • 25
    • 0023575486 scopus 로고
    • Plasmid incompatibility
    • Novick R.P. Plasmid incompatibility. Microbiol. Rev 1987, 51:381-395.
    • (1987) Microbiol. Rev , vol.51 , pp. 381-395
    • Novick, R.P.1
  • 26
    • 77955063339 scopus 로고    scopus 로고
    • Molecular epidemiology of ampicillin resistance in Salmonella spp. and Escherichia coli from wastewater and clinical specimens
    • Pignato S., Coniglio M.A., Faro G., Lefevre M., Weill F.X., Giammanco G. Molecular epidemiology of ampicillin resistance in Salmonella spp. and Escherichia coli from wastewater and clinical specimens. Foodborne Pathog. Dis 2010, 7:945-951.
    • (2010) Foodborne Pathog. Dis , vol.7 , pp. 945-951
    • Pignato, S.1    Coniglio, M.A.2    Faro, G.3    Lefevre, M.4    Weill, F.X.5    Giammanco, G.6
  • 28
    • 84876082029 scopus 로고    scopus 로고
    • Molecular characterization of multiresistant Escherichia coli producing or not extended-spectrum beta-lactamases
    • Ruiz del Castillo B., Vinue L., Roman E.J., Guerra B., Carattoli A., Torres C., et al. Molecular characterization of multiresistant Escherichia coli producing or not extended-spectrum beta-lactamases. BMC Microbiol 2013, 13:84.
    • (2013) BMC Microbiol , vol.13 , pp. 84
    • Ruiz del Castillo, B.1    Vinue, L.2    Roman, E.J.3    Guerra, B.4    Carattoli, A.5    Torres, C.6
  • 31
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol 2011, 28:2731-2739.
    • (2011) Mol. Biol. Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 32
    • 79960969621 scopus 로고    scopus 로고
    • Combinatorial events of insertion sequences and ICE in Gram-negative bacteria
    • Toleman M.A., Walsh T.R. Combinatorial events of insertion sequences and ICE in Gram-negative bacteria. FEMS Microbiol. Rev 2011, 35:912-935.
    • (2011) FEMS Microbiol. Rev , vol.35 , pp. 912-935
    • Toleman, M.A.1    Walsh, T.R.2
  • 33
    • 78149487550 scopus 로고    scopus 로고
    • Replicon sequence typing of IncF plasmids carrying virulence and resistance determinants
    • Villa L., Garcia-Fernandez A., Fortini D., Carattoli A. Replicon sequence typing of IncF plasmids carrying virulence and resistance determinants. J. Antimicrob. Chemother 2010, 65:2518-2529.
    • (2010) J. Antimicrob. Chemother , vol.65 , pp. 2518-2529
    • Villa, L.1    Garcia-Fernandez, A.2    Fortini, D.3    Carattoli, A.4
  • 34
    • 84875175232 scopus 로고    scopus 로고
    • Complete sequence of the IncT-type plasmid pT-OXA-181 carrying the blaOXA-181 carbapenemase gene from Citrobacter freundii
    • Villa L., Carattoli A., Nordmann P., Carta C., Poirel L. Complete sequence of the IncT-type plasmid pT-OXA-181 carrying the blaOXA-181 carbapenemase gene from Citrobacter freundii. Antimicrob. Agents Chemother 2013, 57:1965-1967.
    • (2013) Antimicrob. Agents Chemother , vol.57 , pp. 1965-1967
    • Villa, L.1    Carattoli, A.2    Nordmann, P.3    Carta, C.4    Poirel, L.5
  • 35
    • 77954761569 scopus 로고    scopus 로고
    • Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow
    • Wozniak R.A., Waldor M.K. Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow. Nat. Rev. Microbiol 2010, 8:552-563.
    • (2010) Nat. Rev. Microbiol , vol.8 , pp. 552-563
    • Wozniak, R.A.1    Waldor, M.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.