메뉴 건너뛰기




Volumn 2, Issue , 2013, Pages

JSim, an open-source modeling system for data analysis

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOMATION; COMPUTER ANALYSIS; COMPUTER MODEL; COMPUTER PROGRAM; COMPUTER SIMULATION; DATA ANALYSIS; DATA SYNTHESIS; STATISTICAL ANALYSIS; STOCHASTIC MODEL;

EID: 84914812707     PISSN: 20461402     EISSN: 1759796X     Source Type: Journal    
DOI: 10.12688/f1000research.2-288.v1     Document Type: Article
Times cited : (21)

References (66)
  • 1
    • 0004072686 scopus 로고
    • Compilers: Principles, Techniques and Tools
    • Reference Source, Addison-Wesley
    • Aho A Sethi R Ullman J: Compilers: Principles, Techniques and Tools. Addison-Wesley.1988. Reference Source
    • (1988)
    • Aho, A.1    Sethi, R.2    Ullman, J.3
  • 2
    • 0004242324 scopus 로고    scopus 로고
    • Modern Compiler Implementation in Java
    • Reference Source, Cambridge University Press
    • Appel AW: Modern Compiler Implementation in Java. Cambridge University Press.1998. Reference Source
    • (1998)
    • Appel, A.W.1
  • 3
    • 0034154492 scopus 로고    scopus 로고
    • Facilitated diffusion and membrane permeation of fatty acid in albumin solutions
    • 10784097, 2872167
    • Barta E Sideman S Bassingthwaighte JB: Facilitated diffusion and membrane permeation of fatty acid in albumin solutions. Ann Biomed Eng. 2000;28(3):331-345. 10784097 10.1114/1.274 2872167
    • (2000) Ann Biomed Eng , vol.28 , Issue.3 , pp. 331-345
    • Barta, E.1    Sideman, S.2    Bassingthwaighte, J.B.3
  • 4
    • 0016281891 scopus 로고
    • A concurrent flow model for extraction during transcapillary passage
    • 4608628, 3077802
    • Bassingthwaighte JB: A concurrent flow model for extraction during transcapillary passage. Circ Res. 1974;35(3):483-503. 4608628 10.1161/01.RES.35.3.483 3077802
    • (1974) Circ Res , vol.35 , Issue.3 , pp. 483-503
    • Bassingthwaighte, J.B.1
  • 5
    • 0001462384 scopus 로고
    • Modeling in the analysis of solute and water exchange in the microvasculature
    • Handbook of Physiology. Sect. 2, The Cardiovascular System The Microcirculation, edited by Renkin EM and Michel CC. Bethesda, MD
    • Bassingthwaighte JB Goresky CA: Modeling in the analysis of solute and water exchange in the microvasculature. In: Handbook of Physiology. Sect. 2, The Cardiovascular System. Vol IV The Microcirculation, edited by Renkin EM and Michel CC. Bethesda, MD: Am Physiol Soc. 1984;pp 549-626.
    • (1984) Am Physiol Soc , vol.4 , pp. 549-626
    • Bassingthwaighte, J.B.1    Goresky, C.A.2
  • 7
    • 0024461202 scopus 로고
    • Blood-tissue exchange via transport and transformation by capillary endothelial cells
    • 2791233, 3454538
    • Bassingthwaighte JB Wang CY Chan IS: Blood-tissue exchange via transport and transformation by capillary endothelial cells. Circ Res. 1989;65(4):997-1020. 2791233 10.1161/01.RES.65.4.997 3454538
    • (1989) Circ Res , vol.65 , Issue.4 , pp. 997-1020
    • Bassingthwaighte, J.B.1    Wang, C.Y.2    Chan, I.S.3
  • 8
    • 0026438833 scopus 로고
    • Computationally efficient algorithms for convection-permeation-diffusion models for blood-tissue exchange
    • 1449234
    • Bassingthwaighte JB Chan IS Wang CY: Computationally efficient algorithms for convection-permeation-diffusion models for blood-tissue exchange. Ann Biomed Eng. 1992;20(6):687-725. 1449234
    • (1992) Ann Biomed Eng , vol.20 , Issue.6 , pp. 687-725
    • Bassingthwaighte, J.B.1    Chan, I.S.2    Wang, C.Y.3
  • 9
    • 0034352177 scopus 로고    scopus 로고
    • Strategies for the Physiome Project
    • 11144666, 3425440
    • Bassingthwaighte JB: Strategies for the Physiome Project. Ann Biomed Eng. 2000;28(8):1043-1058. 11144666 10.1114/1.1313771 3425440
    • (2000) Ann Biomed Eng , vol.28 , Issue.8 , pp. 1043-1058
    • Bassingthwaighte, J.B.1
  • 10
    • 23744484039 scopus 로고    scopus 로고
    • Multiscale modeling of cardiac cellular Energetics
    • 16093514, 2864600, In: The Communicative Cardiac Cell. edited by Sideman S, Beyar R and Landesberg A. ;:.
    • Bassingthwaighte JB Chizeck HJ Atlas LE: Multiscale modeling of cardiac cellular Energetics. In: The Communicative Cardiac Cell. edited by Sideman S, Beyar R and Landesberg A. Ann New York Acad Sci. 2005;1047:395-424. 16093514 10.1196/annals.1341.035 2864600
    • (2005) Ann New York Acad Sci , vol.1047 , pp. 395-424
    • Bassingthwaighte, J.B.1    Chizeck, H.J.2    Atlas, L.E.3
  • 11
    • 33947369051 scopus 로고    scopus 로고
    • Strategies and Tactics in Multiscale Modeling of Cell-to-Organ Systems
    • 20463841, 2867355
    • Bassingthwaighte JB Chizeck HJ Atlas LE: Strategies and Tactics in Multiscale Modeling of Cell-to-Organ Systems. Proc IEEE Inst Electr Electron Eng. 2006;94(4):819-830. 20463841 10.1109/JPROC.2006.871775 2867355
    • (2006) Proc IEEE Inst Electr Electron Eng , vol.94 , Issue.4 , pp. 819-830
    • Bassingthwaighte, J.B.1    Chizeck, H.J.2    Atlas, L.E.3
  • 12
    • 33745121853 scopus 로고    scopus 로고
    • GENTEX, a general multiscale model for in vivo tissue exchanges and intraorgan metabolism
    • 16766353
    • Bassingthwaighte JB Raymond GR Ploger JD: GENTEX, a general multiscale model for in vivo tissue exchanges and intraorgan metabolism. Philos Trans A Math Phys Eng Sci. 2006;364(1843):1423-1442. 16766353 10.1098/rsta.2006.1779
    • (2006) Philos Trans A Math Phys Eng Sci , vol.364 , Issue.1843 , pp. 1423-1442
    • Bassingthwaighte, J.B.1    Raymond, G.R.2    Ploger, J.D.3
  • 13
    • 64749110869 scopus 로고    scopus 로고
    • The Cardiac Physiome: perspectives for the future
    • 19098089, 2854146
    • Bassingthwaighte J Noble D Hunter P: The Cardiac Physiome: perspectives for the future. Exp Physiol. 2009;94(5):597-605. 19098089 10.1113/expphysiol.2008.044099 2854146
    • (2009) Exp Physiol , vol.94 , Issue.5 , pp. 597-605
    • Bassingthwaighte, J.1    Noble, D.2    Hunter, P.3
  • 15
    • 84877659220 scopus 로고    scopus 로고
    • Reexamining Michaelis-Menten enzyme kinetics for xanthine oxidase
    • 23471247, 3776473
    • Bassingthwaighte JB Chinn TM: Reexamining Michaelis-Menten enzyme kinetics for xanthine oxidase. Adv Physiol Educ. 2013;37(1):37-48. 23471247 10.1152/advan.00107.2012 3776473
    • (2013) Adv Physiol Educ , vol.37 , Issue.1 , pp. 37-48
    • Bassingthwaighte, J.B.1    Chinn, T.M.2
  • 16
    • 0033798526 scopus 로고    scopus 로고
    • The fractal nature of myocardial blood flow emerges from a whole-organ model of arterial network
    • 10965227
    • Beard DA Bassingthwaighte JB: The fractal nature of myocardial blood flow emerges from a whole-organ model of arterial network. J Vasc Res. 2000;37(4):282-296. 10965227 10.1159/000025742
    • (2000) J Vasc Res , vol.37 , Issue.4 , pp. 282-296
    • Beard, D.A.1    Bassingthwaighte, J.B.2
  • 17
    • 33645789333 scopus 로고    scopus 로고
    • Computational modeling of physiological systems
    • 16179418
    • Beard DA Bassingthwaighte JB Greene A: Computational modeling of physiological systems. Physiol Genomics. 2005;23(1):1-3. 16179418 10.1152/physiolgenomics.00117.2005
    • (2005) Physiol Genomics , vol.23 , Issue.1 , pp. 1-3
    • Beard, D.A.1    Bassingthwaighte, J.B.2    Greene, A.3
  • 18
    • 84868362445 scopus 로고    scopus 로고
    • Multiscale modeling and data integration in the virtual physiological rat project
    • 22805979, 3463790
    • Beard DA Neal ML Tabesh-Saleki N: Multiscale modeling and data integration in the virtual physiological rat project. Ann Biomed Eng. 2012;40(11):2365-2378. 22805979 10.1007/s10439-012-0611-7 3463790
    • (2012) Ann Biomed Eng , vol.40 , Issue.11 , pp. 2365-2378
    • Beard, D.A.1    Neal, M.L.2    Tabesh-Saleki, N.3
  • 19
    • 0028443125 scopus 로고
    • Algorithm 731: A moving-grid interface for systems of one-dimensional time-dependent partial differential equations
    • Blom JG Zegeling RUU: Algorithm 731: A moving-grid interface for systems of one-dimensional time-dependent partial differential equations. ACM Transactions on Mathematical Software (TOMS). 1994;2(2):194-214. 10.1145/178365.178391
    • (1994) ACM Transactions on Mathematical Software (TOMS) , vol.2 , Issue.2 , pp. 194-214
    • Blom, J.G.1    Zegeling, R.U.U.2
  • 20
    • 0027691239 scopus 로고
    • SENSOP: a derivative-free solver for non-linear least squares with sensitivity scaling
    • 8116914, 3756097
    • Chan IS Goldstein AA Bassingthwaighte JB: SENSOP: a derivative-free solver for non-linear least squares with sensitivity scaling. Ann. Biomed. Eng. 1993;21(6):621-631. 8116914 10.1007/BF02368642 3756097
    • (1993) Ann. Biomed. Eng , vol.21 , Issue.6 , pp. 621-631
    • Chan, I.S.1    Goldstein, A.A.2    Bassingthwaighte, J.B.3
  • 21
    • 66249085898 scopus 로고    scopus 로고
    • Error detection and unit conversion. Automated unit balancing in modeling interface systems
    • 21462417, 3420958
    • Chizeck HJ Butterworth E Bassingthwaighte JB: Error detection and unit conversion. Automated unit balancing in modeling interface systems. IEEE Eng Med Biol. 2009;28(3):50-58. 21462417 10.1109/MEMB.2009.932477 3420958
    • (2009) IEEE Eng Med Biol , vol.28 , Issue.3 , pp. 50-58
    • Chizeck, H.J.1    Butterworth, E.2    Bassingthwaighte, J.B.3
  • 22
    • 85081075768 scopus 로고    scopus 로고
    • Special Issue on the Physiome and Beyond
    • Reference Source
    • Coatrieux JL Bassingthwaighte JB: Special Issue on the Physiome and Beyond. Proc IEEE. 2006;94:671-677. Reference Source
    • (2006) Proc IEEE , vol.94 , pp. 671-677
    • Coatrieux, J.L.1    Bassingthwaighte, J.B.2
  • 23
    • 84914812270 scopus 로고    scopus 로고
    • CVODE, a stiff/nonstiff solver in C 1995, UCRL-JC-121014
    • et al., Reference Source, (Cohen
    • Cohen SD Hindmarsh AC: CVODE, a stiff/nonstiff solver in C 1995, UCRL-JC-121014, (Cohen et al.ver. 2.4 Jul 2002). Reference Source
    • Cohen, S.D.1    Hindmarsh, A.C.2
  • 24
    • 1342329447 scopus 로고    scopus 로고
    • An Overview of CellML 1.1, a Biological Model Description Language
    • Cuellar AA Lloyd CM Nielsen PF: An Overview of CellML 1.1, a Biological Model Description Language. SIMULATION. 2003;79(12):740-747. 10.1177/0037549703040939
    • (2003) SIMULATION , vol.79 , Issue.12 , pp. 740-747
    • Cuellar, A.A.1    Lloyd, C.M.2    Nielsen, P.F.3
  • 25
    • 84972521846 scopus 로고
    • The generalized simplex method for minimizing a linear form under linear inequality restraints
    • Reference Source
    • Dantzig GB Orden A Wolfe P: The generalized simplex method for minimizing a linear form under linear inequality restraints. Pacific J Math. 1955;5(2):183-195. Reference Source
    • (1955) Pacific J Math , vol.5 , Issue.2 , pp. 183-195
    • Dantzig, G.B.1    Orden, A.2    Wolfe, P.3
  • 26
    • 0019610360 scopus 로고
    • NL2SOL: An adaptive nonlinear least-squares algorithm
    • Dennis JE Gay DM Welsch RE: NL2SOL: An adaptive nonlinear least-squares algorithm. ACM Trans Math Softw. 1981;7(3):348-368. 10.1145/355958.355966
    • (1981) ACM Trans Math Softw , vol.7 , Issue.3 , pp. 348-368
    • Dennis, J.E.1    Gay, D.M.2    Welsch, R.E.3
  • 27
    • 0004041275 scopus 로고
    • Numerical methods for unconstrained optimization and nonlinear equation
    • Reference Source, N. Y.: Prentice-Hall
    • Dennis JE Schnabel RB: Numerical methods for unconstrained optimization and nonlinear equation. N. Y.: Prentice-Hall,1983;378. Reference Source
    • (1983) , pp. 378
    • Dennis, J.E.1    Schnabel, R.B.2
  • 28
    • 0023748598 scopus 로고
    • A kinetic study of hypoxanthine oxidation by milk xanthine oxidase
    • 3196295, 1135157
    • Escribano J Garcia-Canovas F Garcia-Carmona F: A kinetic study of hypoxanthine oxidation by milk xanthine oxidase. Biochem J. 1988;254(3):829-833. 3196295 1135157
    • (1988) Biochem J , vol.254 , Issue.3 , pp. 829-833
    • Escribano, J.1    Garcia-Canovas, F.2    Garcia-Carmona, F.3
  • 29
    • 0039138984 scopus 로고    scopus 로고
    • Institutionum calculi integralis
    • Reference Source
    • Euler L: Institutionum calculi integralis.2007;2:1768-1770. Reference Source
    • (2007) , vol.2 , pp. 1768-1770
    • Euler, L.1
  • 30
    • 0003539715 scopus 로고
    • Low-order classical Runge-Kutta formulas with stepsize control and their application to some heat transfer problems
    • Reference Source
    • Fehlberg E: Low-order classical Runge-Kutta formulas with stepsize control and their application to some heat transfer problems. NASA Technical Report-315. 1969. Reference Source
    • (1969) NASA Technical Report-315
    • Fehlberg, E.1
  • 31
    • 79952012805 scopus 로고    scopus 로고
    • Multiple ontologies in action: Composite annotations for biosimulation models
    • 20601121, 2989341
    • Gennari JH Neal ML Galdzicki M: Multiple ontologies in action: Composite annotations for biosimulation models. J Biomed Inform. 2011;44(1):146-154. 20601121 10.1016/j.jbi.2010.06.007 2989341
    • (2011) J Biomed Inform , vol.44 , Issue.1 , pp. 146-154
    • Gennari, J.H.1    Neal, M.L.2    Galdzicki, M.3
  • 32
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • Gillespie DT: Exact stochastic simulation of coupled chemical reactions. J Phys Chem. 1977;81(25):2340-2361. 10.1021/j100540a008
    • (1977) J Phys Chem , vol.81 , Issue.25 , pp. 2340-2361
    • Gillespie, D.T.1
  • 33
    • 0001244133 scopus 로고
    • A linear method for determining liver sinusoidal and extravascular volumes
    • 13949263
    • Goresky CA: A linear method for determining liver sinusoidal and extravascular volumes. Am J Physiol. 1963;204:626-640. 13949263
    • (1963) Am J Physiol , vol.204 , pp. 626-640
    • Goresky, C.A.1
  • 34
    • 84914816497 scopus 로고    scopus 로고
    • The Java language environment: A white paper, 1995
    • Reference Source
    • Gosling J McGilton H: The Java language environment: A white paper, 1995. Sun Microsystems. 2003;85. Reference Source
    • (2003) Sun Microsystems , vol.85
    • Gosling, J.1    McGilton, H.2
  • 35
    • 0012912813 scopus 로고
    • Solving Ordinary Differential Equations. Nonstiff Problems. 2nd edition
    • Reference Source, Springer Series in Comput. Math.
    • Hairer E Norsett SP Wanner G: Solving Ordinary Differential Equations. Nonstiff Problems. 2nd edition. Springer Series in Comput. Math.,1993;8:528. Reference Source
    • (1993) , vol.8 , pp. 528
    • Hairer, E.1    Norsett, S.P.2    Wanner, G.3
  • 36
    • 0003589989 scopus 로고    scopus 로고
    • Solving Ordinary Differential Equations. Stiff and Differential-Algebraic Problems. 2nd edition
    • Reference Source, Springer Series in Comput. Math.
    • Hairer E Wanner G: Solving Ordinary Differential Equations. Stiff and Differential-Algebraic Problems. 2nd edition. Springer Series in Comput. Math.,1996;14:614. Reference Source
    • (1996) , vol.14 , pp. 614
    • Hairer, E.1    Wanner, G.2
  • 37
    • 0004291076 scopus 로고
    • Java Network Programming
    • Reference Source, O'Reilly
    • Harold ER: Java Network Programming. O'Reilly.1977. Reference Source
    • (1977)
    • Harold, E.R.1
  • 38
    • 0028533772 scopus 로고
    • Parameter identification in coronary pressure flow models: a graphical approach
    • 7872572
    • Harris PA Bosan S Harris TR: Parameter identification in coronary pressure flow models: a graphical approach. Ann Biomed Eng. 1994;22(6):622-637. 7872572
    • (1994) Ann Biomed Eng , vol.22 , Issue.6 , pp. 622-637
    • Harris, P.A.1    Bosan, S.2    Harris, T.R.3
  • 39
    • 0003463297 scopus 로고
    • Adaptation in natural and artificial Systems: an introductory analysis with applications to biology, control, and artificial intelligence
    • Reference Source, MIT Press
    • Holland JH: Adaptation in natural and artificial Systems: an introductory analysis with applications to biology, control, and artificial intelligence. MIT Press.1992;183. Reference Source
    • (1992) , pp. 183
    • Holland, J.H.1
  • 40
    • 0037342537 scopus 로고    scopus 로고
    • SBML Forum. The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
    • 12611808
    • Hucka M Finney A Sauro HM: SBML Forum. The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics. 2003;19(4):524-31. 12611808 10.1093/bioinformatics/btg015
    • (2003) Bioinformatics , vol.19 , Issue.4 , pp. 524-531
    • Hucka, M.1    Finney, A.2    Sauro, H.M.3
  • 41
    • 84879567883 scopus 로고    scopus 로고
    • Modeling serotonin uptake in the lung shows endothelial transporters dominate over cleft permeation
    • 23645496, 3726944
    • Jardine B Bassingthwaighte JB: Modeling serotonin uptake in the lung shows endothelial transporters dominate over cleft permeation. Am J Physiol Lung Cell Mol Physiol. 2013;305(1):L42-L55. 23645496 10.1152/ajplung.00420.2012 3726944
    • (2013) Am J Physiol Lung Cell Mol Physiol , vol.305 , Issue.1 , pp. L42-L55
    • Jardine, B.1    Bassingthwaighte, J.B.2
  • 42
    • 24544467691 scopus 로고
    • A graphical user interface for computer simulation
    • (XSim).
    • King RB Butterworth EA Weissman LJ: A graphical user interface for computer simulation. FASEB J. 1995;9:A14. (XSim).
    • (1995) FASEB J , vol.9 , pp. A14
    • King, R.B.1    Butterworth, E.A.2    Weissman, L.J.3
  • 43
    • 26444479778 scopus 로고
    • Optimization by simulated annealing
    • 17813860
    • Kirkpatrick S Gelatt CD Jr Vecchi MP: Optimization by simulated annealing. Science. 1983;220(4598):671-680. 17813860 10.1126/science.220.4598.671
    • (1983) Science , vol.220 , Issue.4598 , pp. 671-680
    • Kirkpatrick, S.1    Gelatt, C.D.2    Vecchi, M.P.3
  • 44
    • 0014732494 scopus 로고
    • SIMCON--Simulation control to optimize man-machine interaction
    • 21423785, 3059310
    • Knopp TJ Anderson DU Bassingthwaighte JB: SIMCON--Simulation control to optimize man-machine interaction. Simulation. 1970;14(2):81-86. 21423785 10.1177/003754977001400205 3059310
    • (1970) Simulation , vol.14 , Issue.2 , pp. 81-86
    • Knopp, T.J.1    Anderson, D.U.2    Bassingthwaighte, J.B.3
  • 45
    • 0242667172 scopus 로고    scopus 로고
    • Optimization by direct search: New perspectives on some classical and modern methods
    • Kolda TG Lewis RM Torczon V: Optimization by direct search: New perspectives on some classical and modern methods. Siam Review. 2003;45(3):385-482. 10.1137/S003614450242889
    • (2003) Siam Review , vol.45 , Issue.3 , pp. 385-482
    • Kolda, T.G.1    Lewis, R.M.2    Torczon, V.3
  • 46
    • 0022517309 scopus 로고
    • Multiple tracer dilution estimates of D- and 2-deoxy-D-glucose uptake by the heart
    • 3510568, 3496757
    • Kuikka J Levin M Bassingthwaighte JB: Multiple tracer dilution estimates of D- and 2-deoxy-D-glucose uptake by the heart. Am J Physiol. 1986;250(1 Pt 2):H29-H42. 3510568 3496757
    • (1986) Am J Physiol , vol.250 , Issue.1 , pp. H29-H42
    • Kuikka, J.1    Levin, M.2    Bassingthwaighte, J.B.3
  • 47
    • 84871648646 scopus 로고    scopus 로고
    • Finite Difference Methods for Ordinary and Partial Differential Equations
    • Philadelphia.
    • LeVeque RJ: Finite Difference Methods for Ordinary and Partial Differential Equations. Philadelphia: Siam. 2007. 10.1137/1.9780898717839
    • (2007) Siam
    • LeVeque, R.J.1
  • 48
    • 0004212277 scopus 로고    scopus 로고
    • The Java Native Interface: Programmer's Guide and Specification
    • Reference Source, Addison-Wesley
    • Liang S: The Java Native Interface: Programmer's Guide and Specification. Addison-Wesley.1999;303. Reference Source
    • (1999) , pp. 303
    • Liang, S.1
  • 49
    • 0000334985 scopus 로고
    • The Effect of viscosity in hypervelocity impact cratering
    • MacCormack RW: The Effect of viscosity in hypervelocity impact cratering. AIAA Paper. 1969;40(5):69-354. 10.2514/6.1969-354
    • (1969) AIAA Paper , vol.40 , Issue.5 , pp. 69-354
    • MacCormack, R.W.1
  • 50
    • 0007036926 scopus 로고
    • An operational method for the study of integration processes
    • Weapons Res. Establ. Salisbury, Salisbury
    • Merson RH: An operational method for the study of integration processes. Proc. Symp. Data Processing, Weapons Res. Establ. Salisbury, Salisbury.1957;pp. 110-125.
    • (1957) Proc. Symp. Data Processing , pp. 110-125
    • Merson, R.H.1
  • 51
    • 34748885653 scopus 로고    scopus 로고
    • Subject-specific model estimation of cardiac output and blood volume during hemorrhage
    • 17846886, 3629970
    • Neal ML Bassingthwaighte JB: Subject-specific model estimation of cardiac output and blood volume during hemorrhage. Cardiovasc Eng. 2007;7(3):97-120. 17846886 10.1007/s10558-007-9035-7 3629970
    • (2007) Cardiovasc Eng , vol.7 , Issue.3 , pp. 97-120
    • Neal, M.L.1    Bassingthwaighte, J.B.2
  • 52
    • 0000238336 scopus 로고
    • A simplex method for function minimization
    • Nelder JA Mead R: A simplex method for function minimization. Computer Journal. 1965;7(4):308-313. 10.1093/comjnl/7.4.308
    • (1965) Computer Journal , vol.7 , Issue.4 , pp. 308-313
    • Nelder, J.A.1    Mead, R.2
  • 53
    • 0004230653 scopus 로고    scopus 로고
    • Java Threads (Third Edition)
    • Reference Source, O'Reilly
    • Oaks S Wong H: Java Threads (Third Edition). O'Reilly.2004. Reference Source
    • (2004)
    • Oaks, S.1    Wong, H.2
  • 54
    • 6144253216 scopus 로고
    • Strong inference: Certain systematic methods of scientific thinking may produce much more rapid progress than others
    • 17739513
    • Platt JR: Strong inference: Certain systematic methods of scientific thinking may produce much more rapid progress than others. Science. 1964;146(3642):347-353. 17739513 10.1126/science.146.3642.347
    • (1964) Science , vol.146 , Issue.3642 , pp. 347-353
    • Platt, J.R.1
  • 55
    • 0031149581 scopus 로고    scopus 로고
    • Efficient numerical methods for nonlinear-facilitated transport and exchange in a blood-tissue exchange unit
    • 9146808, 3175772
    • Poulain CA Finlayson BA Bassingthwaighte JB: Efficient numerical methods for nonlinear-facilitated transport and exchange in a blood-tissue exchange unit. Ann Biomed Eng. 1997;25(3):547-64. 9146808 10.1007/BF02684194 3175772
    • (1997) Ann Biomed Eng , vol.25 , Issue.3 , pp. 547-564
    • Poulain, C.A.1    Finlayson, B.A.2    Bassingthwaighte, J.B.3
  • 56
    • 33845387962 scopus 로고    scopus 로고
    • JSIM: Free software package for teaching physiological modeling and research
    • Raymond GM Butterworth E Bassingthwaighte JB: JSIM: Free software package for teaching physiological modeling and research. Exper Biol. 2003;280(5):102.
    • (2003) Exper Biol , vol.280 , Issue.5 , pp. 102
    • Raymond, G.M.1    Butterworth, E.2    Bassingthwaighte, J.B.3
  • 58
    • 0022549973 scopus 로고
    • A dispersion model of hepatic elimination: 1. Formulation of the model and bolus considerations
    • 3783446
    • Roberts MS Rowland M: A dispersion model of hepatic elimination: 1. Formulation of the model and bolus considerations. J Pharmacokinet Biopharm. 1986;14(3):227-260. 3783446
    • (1986) J Pharmacokinet Biopharm , vol.14 , Issue.3 , pp. 227-260
    • Roberts, M.S.1    Rowland, M.2
  • 59
    • 34748814867 scopus 로고    scopus 로고
    • Ontology-based representation of simulation models of physiology
    • 17238424, 1839612
    • Rubin DR Grossman D Neal ML: Ontology-based representation of simulation models of physiology. AMIA Annu Symp Proc. 2006;664-668. 17238424 1839612
    • (2006) AMIA Annu Symp Proc , pp. 664-668
    • Rubin, D.R.1    Grossman, D.2    Neal, M.L.3
  • 60
    • 0017763821 scopus 로고
    • Calcium diffusion in transient and steady states in muscle
    • 901900, 1473340
    • Safford RE Bassingthwaighte JB: Calcium diffusion in transient and steady states in muscle. Biophys J. 1977;20(1):113-136. 901900 10.1016/S0006-3495(77)85539-2 1473340
    • (1977) Biophys J , vol.20 , Issue.1 , pp. 113-136
    • Safford, R.E.1    Bassingthwaighte, J.B.2
  • 61
    • 34249726073 scopus 로고    scopus 로고
    • Computational biology of the cardiac myocyte: proposed standards for the physiome
    • 17449822, 2866297
    • Smith NA Crampin EJ Niederer SA: Computational biology of the cardiac myocyte: proposed standards for the physiome. J Exper Biol. 2007;210(Pt 9):1576-1583. 17449822 10.1242/jeb.000133 2866297
    • (2007) J Exper Biol , vol.210 , pp. 1576-1583
    • Smith, N.A.1    Crampin, E.J.2    Niederer, S.A.3
  • 62
    • 84897413901 scopus 로고    scopus 로고
    • SBML and CellML translation in Antimony and JSim
    • 24215024, (In press).
    • Smith L Butterworth E Bassingthwaighte JB: SBML and CellML translation in Antimony and JSim. Bioinformatics. 2013. (In press). 24215024 10.1093/bioinformatics/btt641
    • (2013) Bioinformatics
    • Smith, L.1    Butterworth, E.2    Bassingthwaighte, J.B.3
  • 63
    • 84885627843 scopus 로고    scopus 로고
    • Scientific Discourse: Buckling at the Seams
    • (Eight articles covering new views on improving scientific communication and accelerating research through openness and clarity.).
    • Stone R Jasny B: Scientific Discourse: Buckling at the Seams. Science. 2013;342(6154):57-82. (Eight articles covering new views on improving scientific communication and accelerating research through openness and clarity.). 10.1126/science.342.6154.56
    • (2013) Science , vol.342 , Issue.6154 , pp. 57-82
    • Stone, R.1    Jasny, B.2
  • 64
    • 0016260572 scopus 로고
    • Diffusion of sucrose, sodium, and water in ventricular myocardium
    • 4440753, 3024886
    • Suenson M Richmond DR Bassingthwaighte JB: Diffusion of sucrose, sodium, and water in ventricular myocardium. Am J Physiol. 1974;227(5):1116-1123. 4440753 3024886
    • (1974) Am J Physiol , vol.227 , Issue.5 , pp. 1116-1123
    • Suenson, M.1    Richmond, D.R.2    Bassingthwaighte, J.B.3
  • 65
    • 1942437459 scopus 로고    scopus 로고
    • Myocardial density and composition: a basis for calculating intracellular metabolite concentrations
    • 14693681
    • Vinnakota KC Bassingthwaighte JB: Myocardial density and composition: a basis for calculating intracellular metabolite concentrations. Am J Physiol Heart Circ Physiol. 2004;286(5):H1742-H1749. 14693681 10.1152/ajpheart.00478.2003
    • (2004) Am J Physiol Heart Circ Physiol , vol.286 , Issue.5 , pp. H1742-H1749
    • Vinnakota, K.C.1    Bassingthwaighte, J.B.2
  • 66
    • 56149125270 scopus 로고    scopus 로고
    • A model browser for biosimulation
    • 18693954, 2655884
    • Yngve G Brinkley JF Cook D: A model browser for biosimulation. AMIA Annu Symp Proc. 2007;2007:836-840. 18693954 2655884
    • (2007) AMIA Annu Symp Proc , vol.2007 , pp. 836-840
    • Yngve, G.1    Brinkley, J.F.2    Cook, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.