메뉴 건너뛰기




Volumn 304, Issue 8, 2014, Pages 1001-1010

Whole genome sequencing indicates Corynebacterium jeikeium comprises 4 separate genomospecies and identifies a dominant genomospecies among clinical isolates

Author keywords

Classification; Clinical testing; Corynebacterium jeikeium; Genomics; Phylogeny; Speciation

Indexed keywords

CEFTRIAXONE; CIPROFLOXACIN; CLINDAMYCIN; COTRIMOXAZOLE; ERYTHROMYCIN; GENTAMICIN; PENICILLIN DERIVATIVE; RNA 16S; SULFAMETHOXAZOLE; TETRACYCLINE; VANCOMYCIN;

EID: 84912016357     PISSN: 14384221     EISSN: 16180607     Source Type: Journal    
DOI: 10.1016/j.ijmm.2014.07.003     Document Type: Article
Times cited : (10)

References (31)
  • 1
    • 79961109150 scopus 로고    scopus 로고
    • BLAST Ring Image Generator (BRIG): Simple prokaryote genome comparisons
    • Alikhan N.F., Petty N.K., Ben Zakour N.L., Beatson S.A. BLAST Ring Image Generator (BRIG): Simple prokaryote genome comparisons. BMC Genomics 2011, 12:402.
    • (2011) BMC Genomics , vol.12 , pp. 402
    • Alikhan, N.F.1    Petty, N.K.2    Ben Zakour, N.L.3    Beatson, S.A.4
  • 5
    • 5644227319 scopus 로고    scopus 로고
    • Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
    • Clarridge J.E. Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin. Microbiol. Rev. 2004, 17:840-862.
    • (2004) Clin. Microbiol. Rev. , vol.17 , pp. 840-862
    • Clarridge, J.E.1
  • 7
    • 79952797542 scopus 로고    scopus 로고
    • Defining pathogenic bacterial species in the genomic era
    • Georgiades K., Raoult D. Defining pathogenic bacterial species in the genomic era. Front. Microbiol. 2010, 1:151.
    • (2010) Front. Microbiol. , vol.1 , pp. 151
    • Georgiades, K.1    Raoult, D.2
  • 8
    • 79952808907 scopus 로고    scopus 로고
    • Genomes of the most dangerous epidemic bacteria have a virulence repertoire characterized by fewer genes but more toxin-antitoxin modules
    • Georgiades K., Raoult D. Genomes of the most dangerous epidemic bacteria have a virulence repertoire characterized by fewer genes but more toxin-antitoxin modules. PloS One 2011, 6:e17962.
    • (2011) PloS One , vol.6 , pp. e17962
    • Georgiades, K.1    Raoult, D.2
  • 10
    • 0019293443 scopus 로고
    • Reproductibility and correlation study of three deoxyribonucleic acid hybridization procedures
    • Grimont P.A.D., Popoff M.Y., Grimont F., Coynault C., Lemelin M. Reproductibility and correlation study of three deoxyribonucleic acid hybridization procedures. Curr. Microbiol. 1980, 4:325-330.
    • (1980) Curr. Microbiol. , vol.4 , pp. 325-330
    • Grimont, P.A.D.1    Popoff, M.Y.2    Grimont, F.3    Coynault, C.4    Lemelin, M.5
  • 11
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • Huson D.H., Bryant D. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 2006, 23:254-267.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 254-267
    • Huson, D.H.1    Bryant, D.2
  • 13
    • 0023109620 scopus 로고
    • Classification of corynebacteria associated with endocarditis (group JK) as Corynebacterium jeikeium sp. nov
    • Jackman P.J.H., Pitcher D.G., Pelczynska S., Borman P. Classification of corynebacteria associated with endocarditis (group JK) as Corynebacterium jeikeium sp. nov. Syst. Appl. Microbiol. 1987, 9:83-90.
    • (1987) Syst. Appl. Microbiol. , vol.9 , pp. 83-90
    • Jackman, P.J.H.1    Pitcher, D.G.2    Pelczynska, S.3    Borman, P.4
  • 14
    • 0021689290 scopus 로고
    • Plasmid-associated bacteriocin production in a JK-type coryneform bacterium
    • Kerry-Williams S.M., Noble W.C. Plasmid-associated bacteriocin production in a JK-type coryneform bacterium. FEMS Microbiol. Lett. 1984, 25:179-182.
    • (1984) FEMS Microbiol. Lett. , vol.25 , pp. 179-182
    • Kerry-Williams, S.M.1    Noble, W.C.2
  • 15
    • 17044364421 scopus 로고    scopus 로고
    • Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium
    • Khamis A., Raoult D., La Scola B. Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium. J. Clin. Microbiol. 2005, 43:1934-1936.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 1934-1936
    • Khamis, A.1    Raoult, D.2    La Scola, B.3
  • 17
    • 0023988195 scopus 로고
    • Genomic mapping by fingerprinting random clones: A mathematical analysis
    • Lander E.S., Waterman M.S. Genomic mapping by fingerprinting random clones: A mathematical analysis. Genomics 1988, 2:231-239.
    • (1988) Genomics , vol.2 , pp. 231-239
    • Lander, E.S.1    Waterman, M.S.2
  • 18
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H., Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 2009, 25:1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 20
    • 84882967629 scopus 로고    scopus 로고
    • Postgenomic analysis of bacterial pathogens repertoire reveals genome reduction rather than virulence factors
    • Merhej V., Georgiades K., Raoult D. Postgenomic analysis of bacterial pathogens repertoire reveals genome reduction rather than virulence factors. Brief. Funct. Genomics 2013, 12:291-304.
    • (2013) Brief. Funct. Genomics , vol.12 , pp. 291-304
    • Merhej, V.1    Georgiades, K.2    Raoult, D.3
  • 21
    • 66749136930 scopus 로고    scopus 로고
    • Massive comparative genomic analysis reveals convergent evolution of specialized bacteria
    • Merhej V., Royer-Carenzi M., Pontarotti P., Raoult D. Massive comparative genomic analysis reveals convergent evolution of specialized bacteria. Biol. Direct 2009, 4:13.
    • (2009) Biol. Direct , vol.4 , pp. 13
    • Merhej, V.1    Royer-Carenzi, M.2    Pontarotti, P.3    Raoult, D.4
  • 22
    • 0037040394 scopus 로고    scopus 로고
    • Microbial minimalism: Genome reduction in bacterial pathogens
    • Moran N.A. Microbial minimalism: Genome reduction in bacterial pathogens. Cell 2002, 108:583-586.
    • (2002) Cell , vol.108 , pp. 583-586
    • Moran, N.A.1
  • 25
    • 73149098333 scopus 로고    scopus 로고
    • Shifting the genomic gold standard for the prokaryotic species definition
    • Richter M., Roselló-Móra R. Shifting the genomic gold standard for the prokaryotic species definition. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:19126-19131.
    • (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , pp. 19126-19131
    • Richter, M.1    Roselló-Móra, R.2
  • 26
    • 0028356017 scopus 로고
    • Genomic diversity among Corynebacterium jeikeium strains and comparison with biochemical characteristics and antimicrobial susceptibilities
    • Riegel P., de Briel D., Prévost G., Jehl F., Monteil H. Genomic diversity among Corynebacterium jeikeium strains and comparison with biochemical characteristics and antimicrobial susceptibilities. J. Clin. Microbiol. 1994, 32:1860-1865.
    • (1994) J. Clin. Microbiol. , vol.32 , pp. 1860-1865
    • Riegel, P.1    de Briel, D.2    Prévost, G.3    Jehl, F.4    Monteil, H.5
  • 27
    • 2442621393 scopus 로고    scopus 로고
    • Corynebacterium species isolated from bone and joint infections identified by 16S rRNA gene sequence analysis
    • Roux V., Drancourt M., Stein A., Riegel P., Raoult D., La Scola B. Corynebacterium species isolated from bone and joint infections identified by 16S rRNA gene sequence analysis. J. Clin. Microbiol. 2004, 42:2231-2233.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 2231-2233
    • Roux, V.1    Drancourt, M.2    Stein, A.3    Riegel, P.4    Raoult, D.5    La Scola, B.6
  • 30
    • 14544294398 scopus 로고    scopus 로고
    • Corynebacterium jeikeium prosthetic joint infection: Case report and literature review
    • Tleyjeh I.M., Qutub M.O., Bakleh M., Sohail M.R., Virk A. Corynebacterium jeikeium prosthetic joint infection: Case report and literature review. Scand. J. Infect. Dis. 2005, 37:151-153.
    • (2005) Scand. J. Infect. Dis. , vol.37 , pp. 151-153
    • Tleyjeh, I.M.1    Qutub, M.O.2    Bakleh, M.3    Sohail, M.R.4    Virk, A.5
  • 31
    • 0035076222 scopus 로고    scopus 로고
    • Featured organism: Reductive evolution in bacteria: Buchnera sp., Rickettsia prowazekii and Mycobacterium leprae
    • Wixon J. Featured organism: Reductive evolution in bacteria: Buchnera sp., Rickettsia prowazekii and Mycobacterium leprae. Comp. Funct. Genomics 2001, 2:44-48.
    • (2001) Comp. Funct. Genomics , vol.2 , pp. 44-48
    • Wixon, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.