Microbial community study in newly established Qingcaosha Reservoir of Shanghai, China

Applied Microbiology and Biotechnology

Volumn 98, Issue 23, 2014, Pages 9849-9858

  Huang, Zhiting ^a   Xie, Bing ^a   Yuan, Qi ^a   Xu, Weiqing ^a   Lu, Jun ^b  

^a EAST CHINA NORMAL UNIVERSITY   (China)

^b AUCKLAND UNIVERSITY OF TECHNOLOGY   (New Zealand)

Author keywords

Cyanobacteria; Microbial community structure; PCR DGGE; q PCR; Qingcaosha Reservoir; Water quality

Indexed keywords

BACTERIA; ELECTROPHORESIS; ESTUARIES; EUTROPHICATION; PHOSPHORUS; POLYMERASE CHAIN REACTION; POTABLE WATER; WATER QUALITY;

CYANOBACTERIA; MICROBIAL COMMUNITY STRUCTURES; PCR-DGGE; Q-PCR; QINGCAOSHA RESERVOIRS;

RESERVOIRS (WATER);

ABUNDANCE; COMMUNITY STRUCTURE; CONCENTRATION (COMPOSITION); DOMINANCE; FRESHWATER ECOSYSTEM; MICROBIAL COMMUNITY; SEASONAL VARIATION; WATER QUALITY;

CHINA; SHANGHAI;

CYANOBACTERIA;

NITROGEN; PHOSPHORUS; WATER;

BACTERIAL LOAD; BACTERIUM; BIOTA; CHEMISTRY; CHINA; CLASSIFICATION; DENATURING GRADIENT GEL ELECTROPHORESIS; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; MICROBIOLOGY; REAL TIME POLYMERASE CHAIN REACTION;

BACTERIA; BACTERIAL LOAD; BIOTA; CHINA; DENATURING GRADIENT GEL ELECTROPHORESIS; NITROGEN; PHOSPHORUS; REAL-TIME POLYMERASE CHAIN REACTION; WATER; WATER MICROBIOLOGY;

EID: 84911805282     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-014-5928-8     Document Type: Article

References (37)

1. Amann RI, Ludwig W, Schleifer KH (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59:143–169
2. APHA-AWWA-WEF (1998) Standard Methods for the Examination of Water and Wastewater. 20th ed American Public Health Association/American Water Works Association/Water Environment Federation, Washington, DC, USA.
3. Becker S, Fahrbach M, Böger P, Ernst A (2002) Quantitative tracing, by Taq nuclease as says of a Synechococcus ecotype in a highly diversified natural population. Appl Environ Microbiol 68:4486–4494
4. Case RJ, Boucher Y, Dahllöf I, Holmström C, Doolittle WF, Kjelleberg S (2007) Use of 16S rRNA and rpoB genes as molecular markers for microbial ecology studies. Appl Environ Microbiol 73:278–288
5. Cayelan CC, Ibelings BW, Hoffmann EP, Hamilton DP, Brooles JD (2012) Eco-physiological adaptations that favour freshwater cyanobacteria in a changing climate. Water Res 46:1394–1407
6. Chang DW, Hobson P, Burch M, Lin TF (2012) Measurement of cyanobacteria using in-vivo fluoroscopy—effect of cyanobacterial species, pigments, and colonies. Water Res 46:5037–5048
7. Feng XT, Xiong YZ, Qian H, Lei MG, Xu DQ, Ren ZQ (2012) Selection of reference genes for gene expression studies in porcine skeletal muscle using SYBR green qPCR. J Biotechnol 150:288–293
8. Gu YL, Le Q, Jin DH (2008) Qingcaosha Reservoir—a century strategic water source of Shanghai City. Shanghai Constr Sci Technol 1:66–69 (In Chinese with English abstract)
9. Harms G, Layton AC, Dionisi HM, Gregory LR, Garrett VM, Hawkins SA, Robinson KG, Sayler GS (2003) Real-time PCR quantification of nitrifying bacteria in a municipal wastewater treatment plant. Environ Sci Technol 37:343–351
10. Jamal AT, Leanne AP, Serhat AY, Brett AN (2012) A multiplex qPCR targeting hepato- and neurotoxigenic cyanobacteria of global significance. Harmful Algae 15:19–25
11. Jiang ZH (2012) Investigation and control of phytoplankton in Qingcaosha Reservoir. Water Purif Technol 31:9–14 (In Chinese with English abstract)
12. Liang DF, Wang XL, Bockelmann-Evans BN, Falconer RA (2013) Study on nutrient distribution and interaction with sediments in a macro-tidal estuary. Adv Water Resour 52:207–220
13. Lin WQ, Gu YL, Lu SQ (2009) Preliminary study on reasonable hydraulic retention time to prevent algae excessive reproduction in Qingcaosha Reservoir. Water Wastewater Engi 35:60–62 (In Chinese with English abstract)
14. Luo YR, Tian Y, Huang X, Yan CL, Hong HS, Lin GH, Zheng TL (2009) Analysis of community structure of a microbial consortium capable of degrading benzo(a)pyrene by DGGE. Mar Pollut Bull 58:1159–1163
15. Muyzer G, De Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695–700
16. Nausch M, Nausch G, Mohrholz V, Siegel H, Wasmund N (2012) Is growth of filamentous cyanobacteria supported by phosphate uptake below the thermocline? Estuar Coast Shelf Sci 99:50–60
17. Niu Y, Shen H, Chen J, Xie P, Yang X, Tao M, Ma ZM, Qi M (2011) Phytoplankton community succession shaping bacterioplankton community composition in Lake Taihu. China Water Res 45:4169–4182
18. Qin BQ (2009) Lake eutrophication: control countermeasures and recycling exploitation. Ecol Eng 35:1569–1573
19. Redfield AC (1958) The biological control of chemical factors in the environment. Am Sci 46:205–221
20. Rinta-Kanto JM, Konopko EA, DeBruyn JM, Bourbonniere RA, Boyer GL, Wilhelm SW (2009) Lake Erie Microcystis: relationship between microcystin production, dynamics of genotypes and environmental parameters in a large lake. Harmful Algae 8:665–673
21. Rodger HD, Turnbull T, Edwards C, Codd GA (1994) Cyanobaterial (blue-green algal) bloom associated pathology in brown trout, Salmo trutta in Loch Leven, Scotland. J Fish Dis 17:177–181
22. Ruley JE, Rusch KA (2002) An assessment of long-term post-restoration water quality trends in a shallow, subtropical, urban hypereutrophic lake. Ecol Eng 19:265–280
23. Samant S, Sha Q, Iyer A, Dhabekar P, Hahn D (2012) Quantification of Frankia in soils using SYBR Green based qPCR. Syst Appl Microbiol 35:191–197
24. Smith VH (1983) Low nitrogen to phosphorus ratios favor dominance by blue-green algae in lake phytoplankton. Science 225:669–671
25. Suzuki MT, Giovannoni SJ (1996) Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl Environ Microbiol 62:625–630
26. Wang HJ, Wang HZ (2009) Mitigation of lake eutrophication: loosen nitrogen control and focus on phosphorus abatement. Prog Nat Sci 10:1445–1451
27. Wang J, Yuan Q, Xie B (2014) Temporal dynamics of cyanobacterial community structure in Dianshan Lake of Shanghai. China Ann Microbiol. doi:10.1007/s13213-014-0841-z
28. Wu X, Xi W, Ye W, Yang H (2007) Bacterial community composition of a shallow hypertrophic freshwater lake in China, revealed by 16S rRNA gene sequences. FEMS Microbiol Ecol 61:85–96
29. Xie B, Lv Z, Hu C, Yang XZ, Li XZ (2013) Nitrogen removal through different pathways in aged refuse bioreactor treating mature landfill leachate. Appl Microbiol Biotechnol 97:9225–9234
30. Yang SQ, Liu PW (2010) Strategy of water pollution prevention in Taihu Lake and its effects analysis. J Great Lakes Res 36:150–158
31. Yang GJ, Qin BQ, Tang XM, Gong ZJ, Zhong CN, Zou H, Wang XD (2012) Contrasting zooplankton communities of two bays of the large, shallow, eutrophic Lake Taihu, China: their relationship to environmental factors. J Great Lakes Res 38:299–308
32. Ye WJ, Tan J, Liu XL, Lin SQ, Pan JL, Li DT, Yang H (2011) Temporal variability of cyanobacteria populations in the water and sediment samples of Lake Taihu as determined by DGGE and real-time PCR. Harmful Algae 10:472–479
33. Yen HK, Lin TF, Tseng IC (2012) Characterization and quantification of major toxigenic Microcystis genotypes in Moo-Tan Reservoir and associated water treatment plant. J Environ Monit 14:687–696
34. Zamyadi A, McQuaid N, Prevost M, Dorner S (2012) Monitoring of potentially toxic cyanobacteria using an online multi-probe in drinking water sources. J Environ Monit 14:579–588
35. Zhou JJ, Gao NY, Zhao SJ (2010) Nitrogen and phosphorus dynamic changing features of raw water before Qingcaosha reservoir operation. Water Wastewater Eng 36:49–52 (In Chinese with English abstract)
36. Zhu MY, Zhu GW, Li W, Zhang YL, Zhao LL, Zhao G (2013) Estimation of the algal-available phosphorus pool in sediments of a large, shallow eutrophic lake (Taihu, China) using profiled SMT fractional analysis. Environ Pollut 173:216–223
37. Zwart G, Crump BC, Kamst-van Agterveld MP, Hagen F, Han SK (2002) Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers. Aquat Microb Ecol 28:141–155