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Volumn 13, Issue 11, 2014, Pages 4983-4994

Ovarian endometriosis signatures established through discovery and directed mass spectrometry analysis

Author keywords

AIMS; endometriosis; immunohistochemistry; mass spectrometry; proteotypic peptides; quantitative proteomics; selected reaction monitoring; SRM; tissue; Western blot

Indexed keywords

ALPHA ACTININ 1; ASPARAGINASE; BIGLYCAN; CALCYPHOSIN; CALPONIN 1; DISTAL LESS HOMEOBOX 5; ELASTIN MICROFIBRIL INTERFACE LOCATED PROTEIN 1; EMILIN 1; FILAMIN A; MESSENGER RNA; MYOSIN HEAVY CHAIN 11; PROLARGIN; PROTEIN; PROTHYROLIBERIN; SECRETED FRIZZLED RELATED PROTEIN 2; STROMELYSIN 3; TRANSFORMING GROWTH FACTOR BETA1; UNCLASSIFIED DRUG; ACTIN BINDING PROTEIN; CALCIUM BINDING PROTEIN; CALPONIN; ELASTIN MICROFIBRIL INTERFACE LOCATED PROTEIN; MEMBRANE PROTEIN;

EID: 84908887448     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr500384n     Document Type: Article
Times cited : (14)

References (58)
  • 1
    • 84855830832 scopus 로고    scopus 로고
    • Prevalence and incidence of diagnosed endometriosis and risk of endometriosis in patients with endometriosis-related symptoms: Findings from a statutory health insurance-based cohort in Germany
    • Abbas, S.; Ihle, P.; Koster, I.; Schubert, I. Prevalence and incidence of diagnosed endometriosis and risk of endometriosis in patients with endometriosis-related symptoms: findings from a statutory health insurance-based cohort in Germany Eur. J. Obstet. Gynecol. Reprod. Biol. 2012, 160 (1) 79-83
    • (2012) Eur. J. Obstet. Gynecol. Reprod. Biol. , vol.160 , Issue.1 , pp. 79-83
    • Abbas, S.1    Ihle, P.2    Koster, I.3    Schubert, I.4
  • 3
    • 77953956205 scopus 로고    scopus 로고
    • Clinical practice. Endometriosis
    • Giudice, L. C. Clinical practice. Endometriosis N. Engl. J. Med. 2010, 362 (25) 2389-98
    • (2010) N. Engl. J. Med. , vol.362 , Issue.25 , pp. 2389-2398
    • Giudice, L.C.1
  • 5
    • 84866171120 scopus 로고    scopus 로고
    • The impact of excision of ovarian endometrioma on ovarian reserve: A systematic review and meta-analysis
    • Raffi, F.; Metwally, M.; Amer, S. The impact of excision of ovarian endometrioma on ovarian reserve: a systematic review and meta-analysis J. Clin. Endocrinol. Metab. 2012, 97 (9) 3146-54
    • (2012) J. Clin. Endocrinol. Metab. , vol.97 , Issue.9 , pp. 3146-3154
    • Raffi, F.1    Metwally, M.2    Amer, S.3
  • 6
    • 0036839667 scopus 로고    scopus 로고
    • Comparative analysis of CA125, tissue polypeptide specific antigen, and soluble interleukin-2 receptor alpha levels in sera, cyst, and ascitic fluids from patients with ovarian carcinoma
    • Sedlaczek, P.; Frydecka, I.; Gabrys̈, M.; Van Dalen, A.; Einarsson, R.; Harłozińska, A. Comparative analysis of CA125, tissue polypeptide specific antigen, and soluble interleukin-2 receptor alpha levels in sera, cyst, and ascitic fluids from patients with ovarian carcinoma Cancer 2002, 95 (9) 1886-93
    • (2002) Cancer , vol.95 , Issue.9 , pp. 1886-1893
    • Sedlaczek, P.1    Frydecka, I.2    Gabrys̈, M.3    Van Dalen, A.4    Einarsson, R.5    Harłozińska, A.6
  • 7
    • 42449126136 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics: A useful tool for biomarker discovery?
    • Gramolini, A.; Peterman, S.; Kislinger, T. Mass spectrometry-based proteomics: a useful tool for biomarker discovery? Clin. Pharmacol. Ther. 2008, 83 (5) 758-60
    • (2008) Clin. Pharmacol. Ther. , vol.83 , Issue.5 , pp. 758-760
    • Gramolini, A.1    Peterman, S.2    Kislinger, T.3
  • 11
    • 79955448303 scopus 로고    scopus 로고
    • Initial development and validation of a novel extraction method for quantitative mining of the formalin-fixed, paraffin-embedded tissue proteome for biomarker investigations
    • Nirmalan, N. J.; Hughes, C.; Peng, J.; McKenna, T.; Langridge, J.; Cairns, D. A.; Harnden, P.; Selby, P. J.; Banks, R. E. Initial development and validation of a novel extraction method for quantitative mining of the formalin-fixed, paraffin-embedded tissue proteome for biomarker investigations J. Proteome Res. 2011, 10 (2) 896-906
    • (2011) J. Proteome Res. , vol.10 , Issue.2 , pp. 896-906
    • Nirmalan, N.J.1    Hughes, C.2    Peng, J.3    McKenna, T.4    Langridge, J.5    Cairns, D.A.6    Harnden, P.7    Selby, P.J.8    Banks, R.E.9
  • 12
    • 71549173120 scopus 로고    scopus 로고
    • Liquid chromatography-tandem and MALDI imaging mass spectrometry analyses of RCL2/CS100-fixed, paraffin-embedded tissues: Proteomics evaluation of an alternate fixative for biomarker discovery
    • Mangé, A.; Chaurand, P.; Perrochia, H.; Roger, P.; Caprioli, R. M.; Solassol, J. Liquid chromatography-tandem and MALDI imaging mass spectrometry analyses of RCL2/CS100-fixed, paraffin-embedded tissues: proteomics evaluation of an alternate fixative for biomarker discovery J. Proteome Res. 2009, 8 (12) 5619-28
    • (2009) J. Proteome Res. , vol.8 , Issue.12 , pp. 5619-5628
    • Mangé, A.1    Chaurand, P.2    Perrochia, H.3    Roger, P.4    Caprioli, R.M.5    Solassol, J.6
  • 14
    • 77956306686 scopus 로고    scopus 로고
    • Differential proteome profiling of eutopic endometrium from women with endometriosis to understand etiology of endometriosis
    • Rai, P.; Kota, V.; Deendayal, M.; Shivaji, S. Differential proteome profiling of eutopic endometrium from women with endometriosis to understand etiology of endometriosis J. Proteome Res. 2010, 9 (9) 4407-19
    • (2010) J. Proteome Res. , vol.9 , Issue.9 , pp. 4407-4419
    • Rai, P.1    Kota, V.2    Deendayal, M.3    Shivaji, S.4
  • 15
    • 78549248529 scopus 로고    scopus 로고
    • Detection of mitochondrial biomarkers in eutopic endometria of endometriosis using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry
    • Ding, X.; Wang, L.; Ren, Y.; Zheng, W. Detection of mitochondrial biomarkers in eutopic endometria of endometriosis using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry Fertil. Steril. 2010, 94 (7) 2528-30
    • (2010) Fertil. Steril. , vol.94 , Issue.7 , pp. 2528-2530
    • Ding, X.1    Wang, L.2    Ren, Y.3    Zheng, W.4
  • 17
    • 77952578016 scopus 로고    scopus 로고
    • Identification biomarkers of eutopic endometrium in endometriosis using artificial neural networks and protein fingerprinting
    • Wang, L.; Zheng, W.; Ding, X. Y.; Yu, J. K.; Jiang, W. Z.; Zhang, S. Z. Identification biomarkers of eutopic endometrium in endometriosis using artificial neural networks and protein fingerprinting Fertil. Steril. 2010, 93 (7) 2460-2
    • (2010) Fertil. Steril. , vol.93 , Issue.7 , pp. 2460-2462
    • Wang, L.1    Zheng, W.2    Ding, X.Y.3    Yu, J.K.4    Jiang, W.Z.5    Zhang, S.Z.6
  • 19
    • 77954805490 scopus 로고    scopus 로고
    • Differences in mitochondrial proteins in the eutopic endometrium of patients with adenomyosis and endometriosis identified using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry
    • Ding, X.; Wang, L.; Ren, Y.; Zheng, W. Differences in mitochondrial proteins in the eutopic endometrium of patients with adenomyosis and endometriosis identified using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry J. Int. Med. Res. 2010, 38 (3) 987-93
    • (2010) J. Int. Med. Res. , vol.38 , Issue.3 , pp. 987-993
    • Ding, X.1    Wang, L.2    Ren, Y.3    Zheng, W.4
  • 22
    • 33746330475 scopus 로고    scopus 로고
    • Use of proteomic analysis of endometriosis to identify different protein expression in patients with endometriosis versus normal controls
    • Zhang, H.; Niu, Y.; Feng, J.; Guo, H.; Ye, X.; Cui, H. Use of proteomic analysis of endometriosis to identify different protein expression in patients with endometriosis versus normal controls Fertil. Steril. 2006, 86 (2) 274-82
    • (2006) Fertil. Steril. , vol.86 , Issue.2 , pp. 274-282
    • Zhang, H.1    Niu, Y.2    Feng, J.3    Guo, H.4    Ye, X.5    Cui, H.6
  • 23
    • 84894412193 scopus 로고    scopus 로고
    • Proteomic analysis of eutopic and ectopic endometriotic tissues based on isobaric peptide tags for relative and absolute quantification (iTRAQ) method
    • Marianowski, P.; Szymusik, I.; Malejczyk, J.; Hibner, M.; Wielgos, M. Proteomic analysis of eutopic and ectopic endometriotic tissues based on isobaric peptide tags for relative and absolute quantification (iTRAQ) method Neuroendocrinol. Lett. 2013, 34 (7) 717-21
    • (2013) Neuroendocrinol. Lett. , vol.34 , Issue.7 , pp. 717-721
    • Marianowski, P.1    Szymusik, I.2    Malejczyk, J.3    Hibner, M.4    Wielgos, M.5
  • 24
    • 33747030845 scopus 로고    scopus 로고
    • Protein biomarker discovery and validation: The long and uncertain path to clinical utility
    • Rifai, N.; Gillette, M. A.; Carr, S. A. Protein biomarker discovery and validation: the long and uncertain path to clinical utility Nat. Biotechnol. 2006, 24 (8) 971-83
    • (2006) Nat. Biotechnol. , vol.24 , Issue.8 , pp. 971-983
    • Rifai, N.1    Gillette, M.A.2    Carr, S.A.3
  • 25
    • 77954523086 scopus 로고    scopus 로고
    • Options and considerations when selecting a quantitative proteomics strategy
    • Domon, B.; Aebersold, R. Options and considerations when selecting a quantitative proteomics strategy Nat. Biotechnol. 2010, 28 (7) 710-21
    • (2010) Nat. Biotechnol. , vol.28 , Issue.7 , pp. 710-721
    • Domon, B.1    Aebersold, R.2
  • 26
    • 34347369278 scopus 로고    scopus 로고
    • Proteomics analysis of human coronary atherosclerotic plaque: A feasibility study of direct tissue proteomics by liquid chromatography and tandem mass spectrometry
    • Bagnato, C.; Thumar, J.; Mayya, V.; Hwang, S.; Zebroski, H.; Claffey, K.; Haudenschild, C.; Eng, J.; Lundgren, D.; Han, D. Proteomics analysis of human coronary atherosclerotic plaque: a feasibility study of direct tissue proteomics by liquid chromatography and tandem mass spectrometry Mol. Cell. Proteomics 2007, 6 (6) 1088-102
    • (2007) Mol. Cell. Proteomics , vol.6 , Issue.6 , pp. 1088-1102
    • Bagnato, C.1    Thumar, J.2    Mayya, V.3    Hwang, S.4    Zebroski, H.5    Claffey, K.6    Haudenschild, C.7    Eng, J.8    Lundgren, D.9    Han, D.10
  • 28
    • 55049104915 scopus 로고    scopus 로고
    • Accurate inclusion mass screening: A bridge from unbiased discovery to targeted assay development for biomarker verification
    • Jaffe, J. D.; Keshishian, H.; Chang, B.; Addona, T. A.; Gillette, M. A.; Carr, S. A. Accurate inclusion mass screening: a bridge from unbiased discovery to targeted assay development for biomarker verification Mol. Cell. Proteomics 2008, 7 (10) 1952-62
    • (2008) Mol. Cell. Proteomics , vol.7 , Issue.10 , pp. 1952-1962
    • Jaffe, J.D.1    Keshishian, H.2    Chang, B.3    Addona, T.A.4    Gillette, M.A.5    Carr, S.A.6
  • 31
    • 30344476702 scopus 로고    scopus 로고
    • An analysis of protein abundance suppression in data dependent liquid chromatography and tandem mass spectrometry with tryptic peptide mixtures of five known proteins
    • Sun, W.; Wu, S.; Wang, X.; Zheng, D.; Gao, Y. An analysis of protein abundance suppression in data dependent liquid chromatography and tandem mass spectrometry with tryptic peptide mixtures of five known proteins Eur. J. Mass Spectrom. 2005, 11 (6) 575-80
    • (2005) Eur. J. Mass Spectrom. , vol.11 , Issue.6 , pp. 575-580
    • Sun, W.1    Wu, S.2    Wang, X.3    Zheng, D.4    Gao, Y.5
  • 32
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
    • Eng, J. K.; McCormack, A. L.; Yates, J. R. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database J. Am. Soc. Mass Spectrom. 1994, 5 (11) 976-89
    • (1994) J. Am. Soc. Mass Spectrom. , vol.5 , Issue.11 , pp. 976-989
    • Eng, J.K.1    McCormack, A.L.2    Yates, J.R.3
  • 33
    • 67650345724 scopus 로고    scopus 로고
    • Improvements to the percolator algorithm for Peptide identification from shotgun proteomics data sets
    • Spivak, M.; Weston, J.; Bottou, L.; Kall, L.; Noble, W. S. Improvements to the percolator algorithm for Peptide identification from shotgun proteomics data sets J. Proteome Res. 2009, 8 (7) 3737-45
    • (2009) J. Proteome Res. , vol.8 , Issue.7 , pp. 3737-3745
    • Spivak, M.1    Weston, J.2    Bottou, L.3    Kall, L.4    Noble, W.S.5
  • 34
    • 67049118923 scopus 로고    scopus 로고
    • Accurate and sensitive peptide identification with Mascot Percolator
    • Brosch, M.; Yu, L.; Hubbard, T.; Choudhary, J. Accurate and sensitive peptide identification with Mascot Percolator J. Proteome Res. 2009, 8 (6) 3176-81
    • (2009) J. Proteome Res. , vol.8 , Issue.6 , pp. 3176-3181
    • Brosch, M.1    Yu, L.2    Hubbard, T.3    Choudhary, J.4
  • 37
    • 14344250874 scopus 로고    scopus 로고
    • Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry
    • Radulovic, D.; Jelveh, S.; Ryu, S.; Hamilton, T. G.; Foss, E.; Mao, Y.; Emili, A. Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry Mol. Cell. Proteomics 2004, 3 (10) 984-97
    • (2004) Mol. Cell. Proteomics , vol.3 , Issue.10 , pp. 984-997
    • Radulovic, D.1    Jelveh, S.2    Ryu, S.3    Hamilton, T.G.4    Foss, E.5    Mao, Y.6    Emili, A.7
  • 38
    • 0037106398 scopus 로고    scopus 로고
    • Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry
    • Bondarenko, P. V.; Chelius, D.; Shaler, T. A. Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry Anal. Chem. 2002, 74 (18) 4741-9
    • (2002) Anal. Chem. , vol.74 , Issue.18 , pp. 4741-4749
    • Bondarenko, P.V.1    Chelius, D.2    Shaler, T.A.3
  • 39
    • 70349678392 scopus 로고    scopus 로고
    • Resampling reveals sample-level differential expression in clinical genome-wide studies
    • Hiissa, J.; Elo, L. L.; Huhtinen, K.; Perheentupa, A.; Poutanen, M.; Aittokallio, T. Resampling reveals sample-level differential expression in clinical genome-wide studies OMICS 2009, 13 (5) 381-96
    • (2009) OMICS , vol.13 , Issue.5 , pp. 381-396
    • Hiissa, J.1    Elo, L.L.2    Huhtinen, K.3    Perheentupa, A.4    Poutanen, M.5    Aittokallio, T.6
  • 41
    • 34547670332 scopus 로고    scopus 로고
    • Variations in appearance of endometriomas
    • Asch, E.; Levine, D. Variations in appearance of endometriomas J. Ultrasound Med. 2007, 26 (8) 993-1002
    • (2007) J. Ultrasound Med. , vol.26 , Issue.8 , pp. 993-1002
    • Asch, E.1    Levine, D.2
  • 43
    • 33846109371 scopus 로고    scopus 로고
    • Direct cancer tissue proteomics: A method to identify candidate cancer biomarkers from formalin-fixed paraffin-embedded archival tissues
    • Hwang, S.; Thumar, J.; Lundgren, D.; Rezaul, K.; Mayya, V.; Wu, L.; Eng, J.; Wright, M.; Han, D. Direct cancer tissue proteomics: a method to identify candidate cancer biomarkers from formalin-fixed paraffin-embedded archival tissues Oncogene 2007, 26 (1) 65-76
    • (2007) Oncogene , vol.26 , Issue.1 , pp. 65-76
    • Hwang, S.1    Thumar, J.2    Lundgren, D.3    Rezaul, K.4    Mayya, V.5    Wu, L.6    Eng, J.7    Wright, M.8    Han, D.9
  • 44
    • 84876736160 scopus 로고    scopus 로고
    • Effect of quality characteristics of single sample preparation steps in the precision and coverage of proteomic studies-a review
    • Krüger, T.; Lehmann, T.; Rhode, H. Effect of quality characteristics of single sample preparation steps in the precision and coverage of proteomic studies-a review Anal. Chim. Acta 2013, 776, 1-10
    • (2013) Anal. Chim. Acta , vol.776 , pp. 1-10
    • Krüger, T.1    Lehmann, T.2    Rhode, H.3
  • 48
    • 80052272793 scopus 로고    scopus 로고
    • TAGLN expression is deregulated in endometriosis and may be involved in cell invasion, migration, and differentiation
    • Dos Santos Hidalgo, G.; Meola, J.; Rosa, E. S. J. C.; Paro de Paz, C. C.; Ferriani, R. A. TAGLN expression is deregulated in endometriosis and may be involved in cell invasion, migration, and differentiation Fertil. Steril. 2011, 96 (3) 700-3
    • (2011) Fertil. Steril. , vol.96 , Issue.3 , pp. 700-703
    • Dos Santos Hidalgo, G.1    Meola, J.2    Rosa, E.S.J.C.3    Paro De Paz, C.C.4    Ferriani, R.A.5
  • 49
    • 0033168621 scopus 로고    scopus 로고
    • Immunohistochemical assessment of superoxide dismutase expression in the endometrium in endometriosis and adenomyosis
    • Ota, H.; Igarashi, S.; Hatazawa, J.; Tanaka, T. Immunohistochemical assessment of superoxide dismutase expression in the endometrium in endometriosis and adenomyosis Fertil. Steril. 1999, 72 (1) 129-34
    • (1999) Fertil. Steril. , vol.72 , Issue.1 , pp. 129-134
    • Ota, H.1    Igarashi, S.2    Hatazawa, J.3    Tanaka, T.4
  • 50
    • 2342475665 scopus 로고    scopus 로고
    • Indices of oxidative stress in eutopic and ectopic endometria of women with endometriosis
    • Oner-Iyidoʇan, Y.; Koçak, H.; Gürdöl, F.; Korkmaz, D.; Buyru, F. Indices of oxidative stress in eutopic and ectopic endometria of women with endometriosis Gynecol. Obstet. Invest. 2004, 57 (4) 214-7
    • (2004) Gynecol. Obstet. Invest. , vol.57 , Issue.4 , pp. 214-217
    • Oner-Iyidoʇan, Y.1    Koçak, H.2    Gürdöl, F.3    Korkmaz, D.4    Buyru, F.5
  • 53
    • 56749182615 scopus 로고    scopus 로고
    • Fibromuscular differentiation in deeply infiltrating endometriosis is a reaction of resident fibroblasts to the presence of ectopic endometrium
    • van Kaam, K. J.; Schouten, J. P.; Nap, A. W.; Dunselman, G. A.; Groothuis, P. G. Fibromuscular differentiation in deeply infiltrating endometriosis is a reaction of resident fibroblasts to the presence of ectopic endometrium Hum. Reprod. 2008, 23 (12) 2692-700
    • (2008) Hum. Reprod. , vol.23 , Issue.12 , pp. 2692-2700
    • Van Kaam, K.J.1    Schouten, J.P.2    Nap, A.W.3    Dunselman, G.A.4    Groothuis, P.G.5
  • 56
    • 0037899249 scopus 로고    scopus 로고
    • The myofibroblast in wound healing and fibrocontractive diseases
    • Gabbiani, G. The myofibroblast in wound healing and fibrocontractive diseases J. Pathol. 2003, 200 (4) 500-3
    • (2003) J. Pathol. , vol.200 , Issue.4 , pp. 500-503
    • Gabbiani, G.1
  • 57
    • 32144449890 scopus 로고    scopus 로고
    • Progesterone-dependent release of transforming growth factor-β1 from epithelial cells enhances the endometrial decidualization by turning on the Smad signalling in stromal cells
    • Kim, M. R.; Park, D. W.; Lee, J. H.; Choi, D. S.; Hwang, K. J.; Ryu, H. S.; Min, C. K. Progesterone-dependent release of transforming growth factor-β1 from epithelial cells enhances the endometrial decidualization by turning on the Smad signalling in stromal cells Mol. Hum. Reprod. 2005, 11 (11) 801-8
    • (2005) Mol. Hum. Reprod. , vol.11 , Issue.11 , pp. 801-808
    • Kim, M.R.1    Park, D.W.2    Lee, J.H.3    Choi, D.S.4    Hwang, K.J.5    Ryu, H.S.6    Min, C.K.7
  • 58
    • 0034073373 scopus 로고    scopus 로고
    • Smooth muscle metaplasia in ovarian endometriosis
    • Fukunaga, M. Smooth muscle metaplasia in ovarian endometriosis Histopathology 2000, 36 (4) 348-52
    • (2000) Histopathology , vol.36 , Issue.4 , pp. 348-352
    • Fukunaga, M.1


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