DNA sequence-dependent morphological evolution of silver nanoparticles and their optical and hybridization properties

Journal of the American Chemical Society

Volumn 136, Issue 43, 2014, Pages 15195-15202

  Wu, Jiangjiexing ^a,b   Tan, Li Huey ^b   Hwang, Kevin ^b   Xing, Hang ^b   Wu, Peiwen ^c   Li, Wei ^a   Lu, Yi ^b,c  

^a TIANJIN UNIVERSITY   (China)

^b UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^c UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; DNA; DNA SEQUENCES; MORPHOLOGY; NANOPARTICLES; OPTICAL PROPERTIES; SYNTHESIS (CHEMICAL);

DNA SECONDARY STRUCTURES; MORPHOLOGICAL EVOLUTION; NANOPARTICLE GROWTHS; PROGRAMMABLE ASSEMBLY; SECONDARY STRUCTURES; SILVER NANOPARTICLES; SILVER NANOPARTICLES (AGNPS); UV-VIS ABSORPTIONS;

SILVER;

DNA; DNA BASE; GLUTATHIONE; OLIGOMER; SILVER NANOPARTICLE; ACETIC ACID DERIVATIVE; ASCORBIC ACID; METAL NANOPARTICLE; SILVER; SILVER ACETATE; SILVER DERIVATIVE;

ABSORPTION; ADSORPTION KINETICS; ARTICLE; BINDING AFFINITY; CONTROLLED STUDY; DNA HYBRIDIZATION; DNA SEQUENCE; MOLECULAR EVOLUTION; MOLECULAR RECOGNITION; MOLECULAR STABILITY; MORPHOLOGY; NANOFABRICATION; OPTICS; PROTEIN SECONDARY STRUCTURE; SCANNING ELECTRON MICROSCOPY; TRANSMISSION ELECTRON MICROSCOPY; ULTRAVIOLET SPECTROSCOPY; CHEMISTRY; GENETICS; LIGHT RELATED PHENOMENA; NANOTECHNOLOGY; NUCLEIC ACID HYBRIDIZATION; NUCLEOTIDE SEQUENCE; PROCEDURES;

ACETATES; ASCORBIC ACID; BASE SEQUENCE; DNA; METAL NANOPARTICLES; NANOTECHNOLOGY; NUCLEIC ACID HYBRIDIZATION; OPTICAL PROCESSES; SILVER; SILVER COMPOUNDS;

EID: 84908635344     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja506150s     Document Type: Article

References (83)

1. Rycenga, M.; Cobley, C. M.; Zeng, J.; Li, W.; Moran, C. H.; Zhang, Q.; Qin, D.; Xia, Y. Chem. Rev. 2011, 111, 3669-3712
2. Zhang, Q.; Li, W.; Moran, C.; Zeng, J.; Chen, J.; Wen, L.-P.; Xia, Y. J. Am. Chem. Soc. 2010, 132, 11372-11378
3. Lei, Y.; Mehmood, F.; Lee, S.; Greeley, J.; Lee, B.; Seifert, S.; Winans, R. E.; Elam, J. W.; Meyer, R. J.; Redfern, P. C.; Teschner, D.; Schlögl, R.; Pellin, M. J.; Curtiss, L. A.; Vajda, S. Science 2010, 328, 224-228
4. Guo, W.; Yuan, J.; Wang, E. Chem. Commun. 2009, 3395-3397
5. Sun, L.; Sun, Y.; Xu, F.; Zhang, Y.; Yang, T.; Guo, C.; Liu, Z.; Li, Z. Nanotechnology 2009, 20 125502
6. Zeng, J.; Zheng, Y.; Rycenga, M.; Tao, J.; Li, Z.-Y.; Zhang, Q.; Zhu, Y.; Xia, Y. J. Am. Chem. Soc. 2010, 132, 8552-8553
7. Zhang, Q.; Hu, Y.; Guo, S.; Goebl, J.; Yin, Y. Nano Lett. 2010, 10, 5037-5042
8. Zhang, Q.; Ge, J.; Pham, T.; Goebl, J.; Hu, Y.; Lu, Z.; Yin, Y. Angew. Chem., Int. Ed. 2009, 48, 3516-3519
9. Wei, W.; Li, S.; Qin, L.; Xue, C.; Millstone, J. E.; Xu, X.; Schatz, G. C.; Mirkin, C. A. Nano Lett. 2008, 8, 3446-3449
10. Christopher, P.; Linic, S. ChemCatChem 2010, 2, 78-83
11. Mulvihill, M.; Tao, A.; Benjauthrit, K.; Arnold, J.; Yang, P. Angew. Chem., Int. Ed. 2008, 47, 6456-6460
12. Esumi, K.; Isono, R.; Yoshimura, T. Langmuir 2004, 20, 237-243
13. Murugadoss, A.; Chattopadhyay, A. Nanotechnology 2008, 19 015603
14. Zhang, H.; Li, X.; Chen, G. J. Mater. Chem. 2009, 19, 8223-8231
15. Sun, Y.; Xia, Y. Science 2002, 298, 2176-2179
16. Petty, J. T.; Zheng, J.; Hud, N. V.; Dickson, R. M. J. Am. Chem. Soc. 2004, 126, 5207-5212
17. Fu, Y.; Zhang, J.; Chen, X.; Huang, T.; Duan, X.; Li, W.; Wang, J. J. Phys. Chem. C 2011, 115, 10370-10379
18. Ritchie, C. M.; Johnsen, K. R.; Kiser, J. R.; Antoku, Y.; Dickson, R. M.; Petty, J. T. J. Phys. Chem. C 2007, 111, 175-181
19. Kim, B.-H.; Oh, J.-H.; Han, S. H.; Yun, Y.-J.; Lee, J.-S. Chem. Mater. 2012, 24, 4424-4433
20. Demers, L. M.; Östblom, M.; Zhang, H.; Jang, N.-H.; Liedberg, B.; Mirkin, C. A. J. Am. Chem. Soc. 2002, 124, 11248-11249
21. Braun, E.; Eichen, Y.; Sivan, U.; Ben-Yoseph, G. Nature 1998, 391, 775-778
22. Gu, Q.; Cheng, C.; Gonela, R.; Suryanarayanan, S.; Anabathula, S.; Dai, K.; Haynie, D. T. Nanotechnology 2006, 17 R14
23. Yan, H.; Park, S. H.; Finkelstein, G.; Reif, J. H.; LaBean, T. H. Science 2003, 301, 1882-1884
24. Zhang, J.; Liu, Y.; Ke, Y.; Yan, H. Nano Lett. 2006, 6, 248-251
25. Lee, J. H.; Wernette, D. P.; Yigit, M. V.; Liu, J.; Wang, Z.; Lu, Y. Angew. Chem., Int. Ed. 2007, 46, 9006-9010
26. Alivisatos, A. P.; Johnsson, K. P.; Peng, X.; Wilson, T. E.; Loweth, C. J.; Bruchez, M. P.; Schultz, P. G. Nature 1996, 382, 609-611
27. Zhang, X.; Servos, M. R.; Liu, J. Chem. Commun. 2012, 48, 10114-10116
28. Liu, J.; Cao, Z.; Lu, Y. Chem. Rev. 2009, 109, 1948-1998
29. Zhao, W.; Chiuman, W.; Lam, J. C. F.; McManus, S. A.; Chen, W.; Cui, Y.; Pelton, R.; Brook, M. A.; Li, Y. J. Am. Chem. Soc. 2008, 130, 3610-3618
30. Lu, Y.; Liu, J. Acc. Chem. Res. 2007, 40, 315-323
31. Xu, W.; Xue, X.; Li, T.; Zeng, H.; Liu, X. Angew. Chem., Int. Ed. 2009, 48, 6849-6852
32. Seeman, N. C. Nature 2003, 421, 427-431
33. Zhao, W.; Gao, Y.; Kandadai, S. A.; Brook, M. A.; Li, Y. Angew. Chem., Int. Ed. 2006, 45, 2409-2413
34. Yan, W.; Xu, L.; Xu, C.; Ma, W.; Kuang, H.; Wang, L.; Kotov, N. A. J. Am. Chem. Soc. 2012, 134, 15114-15121
35. Deng, Z.; Tian, Y.; Lee, S.-H.; Ribbe, A. E.; Mao, C. Angew. Chem., Int. Ed. 2005, 44, 3582-3585
36. Aldaye, F. A.; Sleiman, H. F. Angew. Chem., Int. Ed. 2006, 45, 2204-2209
37. Xu, L.; Ma, W.; Wang, L.; Xu, C.; Kuang, H.; Kotov, N. A. Chem. Soc. Rev. 2013, 42, 3114-3126
38. Mirkin, C. A.; Letsinger, R. L.; Mucic, R. C.; Storhoff, J. J. Nature 1996, 382, 607-609
39. Tikhomirov, G.; Hoogland, S.; Lee, P. E.; Fischer, A.; Sargent, E. H.; Kelley, S. O. Nat. Nanotechnol. 2011, 6, 485-490
40. Xu, L.; Kuang, H.; Xu, C.; Ma, W.; Wang, L.; Kotov, N. A. J. Am. Chem. Soc. 2012, 134, 1699-1709
41. Sharma, J.; Chhabra, R.; Cheng, A.; Brownell, J.; Liu, Y.; Yan, H. Science 2009, 323, 112-116
42. Storhoff, J. J.; Mirkin, C. A. Chem. Rev. 1999, 99, 1849-1862
43. Ma, N.; Sargent, E. H.; Kelley, S. O. Nat. Nanotechnol. 2009, 4, 121-125
44. Pal, S.; Deng, Z.; Wang, H.; Zou, S.; Liu, Y.; Yan, H. J. Am. Chem. Soc. 2011, 133, 17606-17609
45. Qi, H.; Ghodousi, M.; Du, Y.; Grun, C.; Bae, H.; Yin, P.; Khademhosseini, A. Nat. Commun. 2013, 4 2275
46. Tan, S. J.; Campolongo, M. J.; Luo, D.; Cheng, W. Nat. Nanotechnol. 2011, 6, 268-276
47. Cheng, W.; Park, N.; Walter, M. T.; Hartman, M. R.; Luo, D. Nat. Nanotechnol. 2008, 3, 682-690
48. Pinheiro, A. V.; Han, D.; Shih, W. M.; Yan, H. Nat. Nanotechnol. 2011, 6, 763-772
49. Macfarlane, R. J.; Lee, B.; Jones, M. R.; Harris, N.; Schatz, G. C.; Mirkin, C. A. Science 2011, 334, 204-208
50. Fu, Y.; Wang, X.; Zhang, J.; Li, W. Curr. Opin. Biotechnol. 2014, 28, 33-38
51. Tan, L. H.; Xing, H.; Lu, Y. Acc. Chem. Res. 2014, 47, 1881-1890
52. Macfarlane, R. J.; O'Brien, M. N.; Petrosko, S. H.; Mirkin, C. A. Angew. Chem., Int. Ed. 2013, 52, 5688-5698
53. Senesi, A. J.; Eichelsdoerfer, D. J.; Macfarlane, R. J.; Jones, M. R.; Auyeung, E.; Lee, B.; Mirkin, C. A. Angew. Chem., Int. Ed. 2013, 52, 6624-6628
54. Cutler, J. I.; Auyeung, E.; Mirkin, C. A. J. Am. Chem. Soc. 2012, 134, 1376-1391
55. Lee, J. H.; Yigit, M. V.; Mazumdar, D.; Lu, Y. Adv. Drug Delivery Rev. 2010, 62, 592-605
56. Xing, H.; Wong, N. Y.; Xiang, Y.; Lu, Y. Curr. Opin. Chem. Biol. 2012, 16, 429-435
57. Wang, Z.; Zhang, J.; Ekman, J. M.; Kenis, P. J. A.; Lu, Y. Nano Lett. 2010, 10, 1886-1891
58. Wang, Z.; Tang, L.; Tan, L. H.; Li, J.; Lu, Y. Angew. Chem., Int. Ed. 2012, 51, 9078-9082
59. Richards, C. I.; Choi, S.; Hsiang, J.-C.; Antoku, Y.; Vosch, T.; Bongiorno, A.; Tzeng, Y.-L.; Dickson, R. M. J. Am. Chem. Soc. 2008, 130, 5038-5039
60. Wang, Q.; Liu, Y.; Ke, Y.; Yan, H. Angew. Chem., Int. Ed. 2007, 47, 316-319
61. Xia, X.; Zeng, J.; Oetjen, L. K.; Li, Q.; Xia, Y. J. Am. Chem. Soc. 2012, 134, 1793-1801
62. Siekkinen, A. R.; McLellan, J. M.; Chen, J.; Xia, Y. Chem. Phys. Lett. 2006, 432, 491-496
63. Temgire, M. K.; Joshi, S. S. Radiat. Phys. Chem. 2004, 71, 1039-1044
64. Basu, S.; Jana, S.; Pande, S.; Pal, T. J. Colloid Interface Sci. 2008, 321, 288-293
65. Yamane, T.; Davidson, N. Biochim. Biophys. Acta 1962, 55, 609-621
66. Wu, S.; Zhao, H.; Ju, H.; Shi, C.; Zhao, J. Electrochem. Commun. 2006, 8, 1197-1203
67. Wang, Y.; Xie, S.; Liu, J.; Park, J.; Huang, C. Z.; Xia, Y. Nano Lett. 2013, 13, 2276-2281
68. Guéron, M.; Leroy, J.-L. Curr. Opin. Struct. Biol. 2000, 10, 326-331
69. Gehring, K.; Leroy, J.-L.; Gueron, M. Nature 1993, 363, 561-565
70. Keniry, M. A. Biopolymers 2000, 56, 123-146
71. Gellert, M.; Lipsett, M. N.; Davies, D. R. Proc. Natl. Acad. Sci. U.S.A. 1962, 48, 2013-2018
72. Wu, J.; Fu, Y.; He, Z.; Han, Y.; Zheng, L.; Zhang, J.; Li, W. J. Phys. Chem. B 2012, 116, 1655-1665
73. Emory, S. R.; Nie, S. J. Phys. Chem. B 1998, 102, 493-497
74. Li, W.; Camargo, P. H. C.; Lu, X.; Xia, Y. Nano Lett. 2009, 9, 485-490
75. Osawa, M.; Matsuda, N.; Yoshii, K.; Uchida, I. J. Phys. Chem. 1994, 98, 12702-12707
76. Sauer, G.; Brehm, G.; Schneider, S. J. Raman Spectrosc. 2004, 35, 568-576
77. Mulvihill, M. J.; Ling, X. Y.; Henzie, J.; Yang, P. J. Am. Chem. Soc. 2010, 132, 268-274
78. Dougan, J. A.; Karlsson, C.; Smith, W. E.; Graham, D. Nucleic Acids Res. 2007, 35, 3668-3675
79. Pal, S.; Sharma, J.; Yan, H.; Liu, Y. Chem. Commun. 2009, 6059-6061
80. Thompson, D. G.; Enright, A.; Faulds, K.; Smith, W. E.; Graham, D. Anal. Chem. 2008, 80, 2805-2810
81. Lee, J.-S.; Lytton-Jean, A. K. R.; Hurst, S. J.; Mirkin, C. A. Nano Lett. 2007, 7, 2112-2115
82. Storhoff, J. J.; Elghanian, R.; Mirkin, C. A.; Letsinger, R. L. Langmuir 2002, 18, 6666-6670
83. Li, L.-L.; Wu, P.; Hwang, K.; Lu, Y. J. Am. Chem. Soc. 2013, 135, 2411-2414