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Volumn 25, Issue 11, 2014, Pages 1953-1961

Top-down and bottom-up identification of proteins by liquid extraction surface analysis mass spectrometry of healthy and diseased human liver tissue

Author keywords

Ambient; Bottom up; LESA; Liquid microjunction; Proteomics; Top down

Indexed keywords

CHROMATOGRAPHY; DISSOCIATION; EXTRACTION; FATTY ACIDS; LIQUID CHROMATOGRAPHY; LIQUIDS; MASS SPECTROMETRY; MOLECULAR BIOLOGY; PATHOLOGY; SPECTROMETRY; SURFACE ANALYSIS; TISSUE; TISSUE ENGINEERING;

EID: 84908604690     PISSN: 10440305     EISSN: 18791123     Source Type: Journal    
DOI: 10.1007/s13361-014-0967-z     Document Type: Article
Times cited : (79)

References (20)
  • 1
    • 84855171923 scopus 로고    scopus 로고
    • Diagnosis and evaluation of nonalcoholic fatty liver disease
    • Obika, M., Noguchi, H.: Diagnosis and evaluation of nonalcoholic fatty liver disease. Exp. Diabetes Res. 2012, 1-12 (2012)
    • (2012) Exp. Diabetes Res. , vol.2012 , pp. 1-12
    • Obika, M.1    Noguchi, H.2
  • 2
    • 20144364416 scopus 로고    scopus 로고
    • Nonalcoholic steatohepatitis
    • 1:STN:280:DC%2BD2M3ot1ahsg%3D%3D
    • Das, K., Kar, P.: Nonalcoholic steatohepatitis. J. Assoc. Physicians India 53, 195-199 (2005)
    • (2005) J. Assoc. Physicians India , vol.53 , pp. 195-199
    • Das, K.1    Kar, P.2
  • 3
    • 0034720287 scopus 로고    scopus 로고
    • Evaluation of abnormal liver-enzyme results in asymptomatic patients
    • 1:STN:280:DC%2BD3c3ivVOlsQ%3D%3D
    • Pratt, D.S., Kaplan, M.M.: Evaluation of abnormal liver-enzyme results in asymptomatic patients. N. Engl. J. Med. 342, 1266-1271 (2000)
    • (2000) N. Engl. J. Med. , vol.342 , pp. 1266-1271
    • Pratt, D.S.1    Kaplan, M.M.2
  • 4
    • 44449118921 scopus 로고    scopus 로고
    • Fatty acid-binding proteins: Role in metabolic diseases and potential as drug targets
    • 1:CAS:528:DC%2BD1cXmsVOjsbk%3D
    • Furuhashi, M., Hotamisligil, G.S.: Fatty acid-binding proteins: role in metabolic diseases and potential as drug targets. Nat. Rev. Drug Discov. 7, 489-503 (2008)
    • (2008) Nat. Rev. Drug Discov. , vol.7 , pp. 489-503
    • Furuhashi, M.1    Hotamisligil, G.S.2
  • 5
    • 84879126852 scopus 로고    scopus 로고
    • Liver fatty acid binding protein (L-Fabp) modulates murine stellate cell activation and diet-induced nonalcoholic fatty liver disease
    • 1:CAS:528:DC%2BC3sXps1Ciu70%3D
    • Chen, A., Tang, Y., Davis, V., Hsu, F.F., Kennedy, S.M., Song, H., Turk, J., Brunt, E.M., Newberry, E.P., Davidson, N.O.: Liver fatty acid binding protein (L-Fabp) modulates murine stellate cell activation and diet-induced nonalcoholic fatty liver disease. Hepatology 57, 2202-2212 (2013)
    • (2013) Hepatology , vol.57 , pp. 2202-2212
    • Chen, A.1    Tang, Y.2    Davis, V.3    Hsu, F.F.4    Kennedy, S.M.5    Song, H.6    Turk, J.7    Brunt, E.M.8    Newberry, E.P.9    Davidson, N.O.10
  • 6
    • 84860342480 scopus 로고    scopus 로고
    • Two genetic variants in FABP1 and susceptibility to nonalcohol fatty liver disease in a Chinese population
    • 1:CAS:528:DC%2BC38XlsVahs7c%3D
    • Peng, X.E., Wu, Y.L., Lu, Q.Q., Hu, Z.J., Lin, X.: Two genetic variants in FABP1 and susceptibility to nonalcohol fatty liver disease in a Chinese population. Gene 500, 54-58 (2012)
    • (2012) Gene , vol.500 , pp. 54-58
    • Peng, X.E.1    Wu, Y.L.2    Lu, Q.Q.3    Hu, Z.J.4    Lin, X.5
  • 7
    • 84899930784 scopus 로고    scopus 로고
    • Structural and functional interaction of fatty acids with human liver fatty acid-binding protein (L-FABP) T94A variant
    • 1:CAS:528:DC%2BC2cXntFCms7w%3D
    • Huang, H., McIntosh, A.L., Martin, G.G., Landrock, K.K., Landrock, D., Gupta, S., Atshaves, B.P., Kier, A.B., Schroeder, F.: Structural and functional interaction of fatty acids with human liver fatty acid-binding protein (L-FABP) T94A variant. FEBS J. 281, 2266-2283 (2014)
    • (2014) FEBS J. , vol.281 , pp. 2266-2283
    • Huang, H.1    McIntosh, A.L.2    Martin, G.G.3    Landrock, K.K.4    Landrock, D.5    Gupta, S.6    Atshaves, B.P.7    Kier, A.B.8    Schroeder, F.9
  • 8
    • 84880831287 scopus 로고    scopus 로고
    • Dried blood spot proteomics: Surface extraction of endogenous proteins coupled with automated sample preparation and mass spectrometry analysis
    • 1:CAS:528:DC%2BC3sXhtFaksLjK
    • Martin, N.J., Bunch, J., Cooper, H.J.: Dried blood spot proteomics: surface extraction of endogenous proteins coupled with automated sample preparation and mass spectrometry analysis. J. Am. Soc. Mass Spectrom. 24, 1242-1249 (2013)
    • (2013) J. Am. Soc. Mass Spectrom. , vol.24 , pp. 1242-1249
    • Martin, N.J.1    Bunch, J.2    Cooper, H.J.3
  • 9
    • 84880551095 scopus 로고    scopus 로고
    • Spatially-directed protein identification from tissue sections by top-down LC-MS/MS with electron transfer dissociation
    • 1:CAS:528:DC%2BC3sXosVejsL4%3D
    • Schey, K.L., Anderson, D.M., Rose, K.L.: Spatially-directed protein identification from tissue sections by top-down LC-MS/MS with electron transfer dissociation. Anal. Chem. 85, 6767-6774 (2013)
    • (2013) Anal. Chem. , vol.85 , pp. 6767-6774
    • Schey, K.L.1    Anderson, D.M.2    Rose, K.L.3
  • 10
    • 77749237328 scopus 로고    scopus 로고
    • Fully automated liquid extraction-based surface sampling and ionization using a chip-based robotic nanoelectrospray platform
    • Kertesz, V., Van Berkel, G.J.: Fully automated liquid extraction-based surface sampling and ionization using a chip-based robotic nanoelectrospray platform. J. Mass Spectrom. 45, 252-260 (2009)
    • (2009) J. Mass Spectrom. , vol.45 , pp. 252-260
    • Kertesz, V.1    Van Berkel, G.J.2
  • 11
    • 77956606489 scopus 로고    scopus 로고
    • Correlation of skin blanching and percutaneous absorption for glucocorticoid receptor agonists by matrix-assisted laser desorption ionization mass spectrometry imaging and liquid extraction surface analysis with nanoelectrospray ionization mass spectrometry
    • 1:CAS:528:DC%2BC3cXhtVehsrbL
    • Marshall, P., Toteu-Djomte, V., Bareille, P., Perry, H., Brown, G., Baumert, M., Biggadike, K.: Correlation of skin blanching and percutaneous absorption for glucocorticoid receptor agonists by matrix-assisted laser desorption ionization mass spectrometry imaging and liquid extraction surface analysis with nanoelectrospray ionization mass spectrometry. Anal. Chem. 82, 7787-7794 (2010)
    • (2010) Anal. Chem. , vol.82 , pp. 7787-7794
    • Marshall, P.1    Toteu-Djomte, V.2    Bareille, P.3    Perry, H.4    Brown, G.5    Baumert, M.6    Biggadike, K.7
  • 12
    • 79960110209 scopus 로고    scopus 로고
    • Utility of spatially-resolved atmospheric pressure surface sampling and ionization techniques as alternatives to mass spectrometric imaging (MSI) in drug metabolism
    • 1:CAS:528:DC%2BC3MXosFaltLY%3D
    • Blatherwick, E.Q., Van Berkel, G.J., Pickup, K., Johansson, M.K., Beaudoin, M.E., Cole, R.O., Day, J.M., Iverson, S., Wilson, I.D., Scrivens, J.H., Weston, D.J.: Utility of spatially-resolved atmospheric pressure surface sampling and ionization techniques as alternatives to mass spectrometric imaging (MSI) in drug metabolism. Xenobiotica 41, 720-734 (2011)
    • (2011) Xenobiotica , vol.41 , pp. 720-734
    • Blatherwick, E.Q.1    Van Berkel, G.J.2    Pickup, K.3    Johansson, M.K.4    Beaudoin, M.E.5    Cole, R.O.6    Day, J.M.7    Iverson, S.8    Wilson, I.D.9    Scrivens, J.H.10    Weston, D.J.11
  • 13
    • 84878068848 scopus 로고    scopus 로고
    • Continuous-flow liquid microjunction surface sampling probe connected on-line with high-performance liquid chromatography/mass spectrometry for spatially resolved analysis of small molecules and proteins
    • Van Berkel, G.J., Kertesz, V.: Continuous-flow liquid microjunction surface sampling probe connected on-line with high-performance liquid chromatography/mass spectrometry for spatially resolved analysis of small molecules and proteins. Rapid Commun. Mass Spectrom. 27, 1329-1334 (2013)
    • (2013) Rapid Commun. Mass Spectrom. , vol.27 , pp. 1329-1334
    • Van Berkel, G.J.1    Kertesz, V.2
  • 14
    • 79954624236 scopus 로고    scopus 로고
    • Hemoglobin variant analysis via direct surface sampling of dried blood spots coupled with high-resolution mass spectrometry
    • 1:CAS:528:DC%2BC3MXisVWgu70%3D
    • Edwards, R.L., Creese, A.J., Baumert, M., Griffiths, P., Bunch, J., Cooper, H.J.: Hemoglobin variant analysis via direct surface sampling of dried blood spots coupled with high-resolution mass spectrometry. Anal. Chem. 83, 2265-2270 (2011)
    • (2011) Anal. Chem. , vol.83 , pp. 2265-2270
    • Edwards, R.L.1    Creese, A.J.2    Baumert, M.3    Griffiths, P.4    Bunch, J.5    Cooper, H.J.6
  • 15
    • 84899892078 scopus 로고    scopus 로고
    • Compound heterozygostes and beta-thalassemia: Top-down mass spectrometry for detection of hemoglobinopathies
    • 1:CAS:528:DC%2BC2cXjslamtLY%3D
    • Edwards, R.L., Griffiths, P., Bunch, J., Cooper, H.J.: Compound heterozygostes and beta-thalassemia: top-down mass spectrometry for detection of hemoglobinopathies. Proteomics 14, 1232-1238 (2014)
    • (2014) Proteomics , vol.14 , pp. 1232-1238
    • Edwards, R.L.1    Griffiths, P.2    Bunch, J.3    Cooper, H.J.4
  • 16
    • 84868228513 scopus 로고    scopus 로고
    • Top-down proteomics and direct surface sampling of neonatal dried blood spots: Diagnosis of unknown hemoglobin variants
    • Edwards, R.L., Griffiths, P., Bunch, J., Cooper, H.J.: Top-down proteomics and direct surface sampling of neonatal dried blood spots: diagnosis of unknown hemoglobin variants. J. Am. Soc. Mass Spectrom. 23, 1-10 (2012)
    • (2012) J. Am. Soc. Mass Spectrom. , vol.23 , pp. 1-10
    • Edwards, R.L.1    Griffiths, P.2    Bunch, J.3    Cooper, H.J.4
  • 17
    • 84872865694 scopus 로고    scopus 로고
    • Development of liquid microjunction extraction strategy for improving protein identification from tissue sections
    • Quanico, J., Franck, J., Dauly, C., Strupat, K., Dupuy, J., Day, R., Salzet, M., Fournier, I., Wisztorski, M.: Development of liquid microjunction extraction strategy for improving protein identification from tissue sections. J. Proteom. 79, 200-218 (2013)
    • (2013) J. Proteom. , vol.79 , pp. 200-218
    • Quanico, J.1    Franck, J.2    Dauly, C.3    Strupat, K.4    Dupuy, J.5    Day, R.6    Salzet, M.7    Fournier, I.8    Wisztorski, M.9
  • 18
    • 84876327507 scopus 로고    scopus 로고
    • Microproteomics by liquid extraction surface analysis: Application to FFPE tissue to study the fimbria region of tubo-ovarian cancer
    • 1:CAS:528:DC%2BC3sXjsVOisL0%3D
    • Wisztorski, M., Fatou, B., Franck, J., Desmons, A., Farre, I., Leblanc, E., Fournier, I., Salzet, M.: Microproteomics by liquid extraction surface analysis: application to FFPE tissue to study the fimbria region of tubo-ovarian cancer. Proteomics Clin. Appl. 7, 234-240 (2013)
    • (2013) Proteomics Clin. Appl. , vol.7 , pp. 234-240
    • Wisztorski, M.1    Fatou, B.2    Franck, J.3    Desmons, A.4    Farre, I.5    Leblanc, E.6    Fournier, I.7    Salzet, M.8
  • 19
    • 84890532078 scopus 로고    scopus 로고
    • Ambient DESI- and LESA-MS analysis of proteins adsorbed to a biomaterial surface using in-situ surface tryptic digestion
    • Rao, W., Celiz, A.D., Scurr, D.J., Alexander, M.R., Barrett, D.A.: Ambient DESI- and LESA-MS analysis of proteins adsorbed to a biomaterial surface using in-situ surface tryptic digestion. J. Am. Soc. Mass Spectrom. 24, 1927-1936 (2013)
    • (2013) J. Am. Soc. Mass Spectrom. , vol.24 , pp. 1927-1936
    • Rao, W.1    Celiz, A.D.2    Scurr, D.J.3    Alexander, M.R.4    Barrett, D.A.5
  • 20
    • 0031012708 scopus 로고    scopus 로고
    • The synthesis rates of total liver protein and plasma albumin determined simultaneously in vivo in humans
    • 1:STN:280:DyaK2s7jvVamtA%3D%3D
    • Barle, H., Nyberg, B., Essen, P., Andersson, K., McNurlan, M.A., Wernerman, J., Garlick, P.J.: The synthesis rates of total liver protein and plasma albumin determined simultaneously in vivo in humans. Hepatology 25, 154-158 (1997)
    • (1997) Hepatology , vol.25 , pp. 154-158
    • Barle, H.1    Nyberg, B.2    Essen, P.3    Andersson, K.4    McNurlan, M.A.5    Wernerman, J.6    Garlick, P.J.7


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