메뉴 건너뛰기




Volumn 5, Issue , 2014, Pages

An optimized optogenetic clustering tool for probing protein interaction and function

Author keywords

[No Author keywords available]

Indexed keywords

CRYPTOCHROME 2; ACTIN; ACTIN RELATED PROTEIN 2; CLATHRIN; PROTEIN BINDING;

EID: 84908520377     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms5925     Document Type: Article
Times cited : (280)

References (44)
  • 1
    • 0024406857 scopus 로고
    • A novel genetic system to detect protein-protein interactions
    • Fields, S. & Song, O. A novel genetic system to detect protein-protein interactions. Nature 340, 245-246 (1989).
    • (1989) Nature , vol.340 , pp. 245-246
    • Fields, S.1    Song, O.2
  • 3
    • 79551523294 scopus 로고    scopus 로고
    • Interactive proteomics research technologies: Recent applications and advances
    • Petschnigg, J., Snider, J. & Stagljar, I. Interactive proteomics research technologies: recent applications and advances. Curr. Opin. Biotechnol. 22, 50-58 (2011).
    • (2011) Curr. Opin. Biotechnol. , vol.22 , pp. 50-58
    • Petschnigg, J.1    Snider, J.2    Stagljar, I.3
  • 4
    • 33748195107 scopus 로고    scopus 로고
    • A rapid, reversible, and tunable method to regulate protein function in living cells using synthetic small molecules
    • Banaszynski, L. A., Chen, L., Maynard-Smith, L. A., Ooi, A. G. L. &Wandless, T. J. A rapid, reversible, and tunable method to regulate protein function in living cells using synthetic small molecules. Cell 126, 995-1004 (2006).
    • (2006) Cell , vol.126 , pp. 995-1004
    • Banaszynski, L.A.1    Chen, L.2    Maynard-Smith, L.A.3    Ooi, A.G.L.4    Wandless, T.J.5
  • 5
    • 14144254396 scopus 로고    scopus 로고
    • Creating small-molecule-dependent switches to modulate biological functions
    • Buskirk, A. R. & Liu, D. R. Creating small-molecule-dependent switches to modulate biological functions. Chem. Biol. 12, 151-161 (2005).
    • (2005) Chem. Biol. , vol.12 , pp. 151-161
    • Buskirk, A.R.1    Liu, D.R.2
  • 6
    • 26444621497 scopus 로고    scopus 로고
    • Millisecond-timescale, genetically targeted optical control of neural activity
    • Boyden, E. S., Zhang, F., Bamberg, E., Nagel, G. & Deisseroth, K. Millisecond-timescale, genetically targeted optical control of neural activity. Nat. Neurosci. 8, 1263-1268 (2005).
    • (2005) Nat. Neurosci. , vol.8 , pp. 1263-1268
    • Boyden, E.S.1    Zhang, F.2    Bamberg, E.3    Nagel, G.4    Deisseroth, K.5
  • 7
    • 79959873914 scopus 로고    scopus 로고
    • The development and application of optogenetics
    • Fenno, L., Yizhar, O. & Deisseroth, K. The development and application of optogenetics. Annu. Rev. Neurosci. 34, 389-412 (2011).
    • (2011) Annu. Rev. Neurosci. , vol.34 , pp. 389-412
    • Fenno, L.1    Yizhar, O.2    Deisseroth, K.3
  • 8
    • 84872664011 scopus 로고    scopus 로고
    • Optogenetic control of cell function using engineered photoreceptors
    • Pathak, G. P., Vrana, J. D. & Tucker, C. L. Optogenetic control of cell function using engineered photoreceptors. Biol. Cell 105, 59-72 (2013).
    • (2013) Biol. Cell , vol.105 , pp. 59-72
    • Pathak, G.P.1    Vrana, J.D.2    Tucker, C.L.3
  • 9
    • 78649714869 scopus 로고    scopus 로고
    • Rapid blue-light-mediated induction of protein interactions in living cells
    • Kennedy, M. J. et al. Rapid blue-light-mediated induction of protein interactions in living cells. Nat. Methods 7, 973-975 (2010).
    • (2010) Nat. Methods , vol.7 , pp. 973-975
    • Kennedy, M.J.1
  • 10
    • 84888202081 scopus 로고    scopus 로고
    • Stochastic ERK activation induced by noise and cell-to-cell propagation regulates cell density-dependent proliferation
    • Aoki, K. et al. Stochastic ERK activation induced by noise and cell-to-cell propagation regulates cell density-dependent proliferation. Mol. Cell 52, 529-540 (2013).
    • (2013) Mol. Cell , vol.52 , pp. 529-540
    • Aoki, K.1
  • 11
  • 13
    • 84882976110 scopus 로고    scopus 로고
    • Optical control of mammalian endogenous transcription and epigenetic states
    • Konermann, S. et al. Optical control of mammalian endogenous transcription and epigenetic states. Nature 500, 472-476 (2013).
    • (2013) Nature , vol.500 , pp. 472-476
    • Konermann, S.1
  • 14
    • 0034626762 scopus 로고    scopus 로고
    • Functional interaction of phytochrome B and cryptochrome 2
    • Mas, P., Devlin, P. F., Panda, S. & Kay, S. A. Functional interaction of phytochrome B and cryptochrome 2. Nature 408, 207-211 (2000).
    • (2000) Nature , vol.408 , pp. 207-211
    • Mas, P.1    Devlin, P.F.2    Panda, S.3    Kay, S.A.4
  • 15
    • 84881409937 scopus 로고    scopus 로고
    • Formation of Arabidopsis Cryptochrome 2 photobodies in mammalian nuclei: Application as an optogenetic DNA damage checkpoint switch
    • Ozkan-Dagliyan, I. et al. Formation of Arabidopsis Cryptochrome 2 photobodies in mammalian nuclei: application as an optogenetic DNA damage checkpoint switch. J. Biol. Chem. 288, 23244-23251 (2013).
    • (2013) J. Biol. Chem. , vol.288 , pp. 23244-23251
    • Ozkan-Dagliyan, I.1
  • 16
    • 62549154533 scopus 로고    scopus 로고
    • Formation of nuclear bodies of Arabidopsis CRY2 in response to blue light is associated with its blue light-dependent degradation
    • Yu, X. et al. Formation of nuclear bodies of Arabidopsis CRY2 in response to blue light is associated with its blue light-dependent degradation. Plant Cell 21, 118-130 (2009).
    • (2009) Plant Cell , vol.21 , pp. 118-130
    • Yu, X.1
  • 17
    • 84874656353 scopus 로고    scopus 로고
    • Optogenetic protein clustering and signaling activation in mammalian cells
    • Bugaj, L. J., Choksi, A. T., Mesuda, C. K., Kane, R. S. & Schaffer, D. V. Optogenetic protein clustering and signaling activation in mammalian cells. Nat. Methods 10, 249-252 (2013).
    • (2013) Nat. Methods , vol.10 , pp. 249-252
    • Bugaj, L.J.1    Choksi, A.T.2    Mesuda, C.K.3    Kane, R.S.4    Schaffer, D.V.5
  • 18
    • 84901843462 scopus 로고    scopus 로고
    • Reversible protein inactivation by optogenetic trapping in cells
    • Lee, S. et al. Reversible protein inactivation by optogenetic trapping in cells. Nat. Methods 11, 633-636 (2014).
    • (2014) Nat. Methods , vol.11 , pp. 633-636
    • Lee, S.1
  • 19
    • 57349088665 scopus 로고    scopus 로고
    • Photoexcited CRY2 interacts with CIB1 to regulate transcription and floral initiation in Arabidopsis
    • Liu, H. et al. Photoexcited CRY2 interacts with CIB1 to regulate transcription and floral initiation in Arabidopsis. Science 322, 1535-1539 (2008).
    • (2008) Science , vol.322 , pp. 1535-1539
    • Liu, H.1
  • 20
    • 34548610383 scopus 로고    scopus 로고
    • Isoform-specific PKA dynamics revealed by dye-triggered aggregation and DAKAP1a-mediated localization in living cells
    • Martin, B. R., Deerinck, T. J., Ellisman, M. H., Taylor, S. S. & Tsien, R. Y. Isoform-specific PKA dynamics revealed by dye-triggered aggregation and DAKAP1a-mediated localization in living cells. Chem. Biol. 14, 1031-1042 (2007).
    • (2007) Chem. Biol. , vol.14 , pp. 1031-1042
    • Martin, B.R.1    Deerinck, T.J.2    Ellisman, M.H.3    Taylor, S.S.4    Tsien, R.Y.5
  • 21
    • 77649245304 scopus 로고    scopus 로고
    • Visualizing dynamic interaction between calmodulin and calmodulin-related kinases via a monitoring method in live mammalian cells
    • Lee, K. H., Lee, S., Lee, W. Y., Yang, H. W. & Heo, W. D. o. Visualizing dynamic interaction between calmodulin and calmodulin-related kinases via a monitoring method in live mammalian cells. Proc. Natl Acad. Sci. USA 107, 3412-3417 (2010).
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 3412-3417
    • Lee, K.H.1    Lee, S.2    Lee, W.Y.3    Yang, H.W.4    Heo, W.D.O.5
  • 22
    • 0342313718 scopus 로고    scopus 로고
    • Homer: A link between neural activity and glutamate receptor function
    • Xiao, B., Tu, J. C. & Worley, P. F. Homer: a link between neural activity and glutamate receptor function. Curr. Opin. Neurobiol. 10, 370-374 (2000).
    • (2000) Curr. Opin. Neurobiol. , vol.10 , pp. 370-374
    • Xiao, B.1    Tu, J.C.2    Worley, P.F.3
  • 23
    • 0034700490 scopus 로고    scopus 로고
    • Stargazin regulates synaptic targeting of AMPA receptors by two distinct mechanisms
    • Chen, L. et al. Stargazin regulates synaptic targeting of AMPA receptors by two distinct mechanisms. Nature 408, 936-943 (2000).
    • (2000) Nature , vol.408 , pp. 936-943
    • Chen, L.1
  • 24
    • 0017854367 scopus 로고
    • Stimulation of brain membrane protein phosphorylation by calcium and an endogenous heat-stable protein
    • Schulman, H. & Greengard, P. Stimulation of brain membrane protein phosphorylation by calcium and an endogenous heat-stable protein. Nature 271, 478-479 (1978).
    • (1978) Nature , vol.271 , pp. 478-479
    • Schulman, H.1    Greengard, P.2
  • 26
    • 33747059623 scopus 로고    scopus 로고
    • Differential control of postsynaptic density scaffolds via actin-dependent and -independent mechanisms
    • Kuriu, T., Inoue, A., Bito, H., Sobue, K. & Okabe, S. Differential control of postsynaptic density scaffolds via actin-dependent and -independent mechanisms. J. Neurosci. 26, 7693-7706 (2006).
    • (2006) J. Neurosci. , vol.26 , pp. 7693-7706
    • Kuriu, T.1    Inoue, A.2    Bito, H.3    Sobue, K.4    Okabe, S.5
  • 27
    • 0345255765 scopus 로고    scopus 로고
    • Targeted chemical disruption of clathrin function in living cells
    • Moskowitz, H., Heuser, J., McGraw, T. & Ryan, T. Targeted chemical disruption of clathrin function in living cells. Mol. Biol. Cell 14, 4437-4447 (2003).
    • (2003) Mol. Biol. Cell , vol.14 , pp. 4437-4447
    • Moskowitz, H.1    Heuser, J.2    McGraw, T.3    Ryan, T.4
  • 28
    • 0021926009 scopus 로고
    • The appearance and internalization of transferrin receptors at the margins of spreading human tumor cells
    • Hopkins, C. R. The appearance and internalization of transferrin receptors at the margins of spreading human tumor cells. Cell 40, 199-208 (1985).
    • (1985) Cell , vol.40 , pp. 199-208
    • Hopkins, C.R.1
  • 29
    • 0346965734 scopus 로고    scopus 로고
    • Inducible clustering of membrane-targeted SH3 domains of the adaptor protein Nck triggers localized actin polymerization
    • Rivera, G. M., Briceño, C. A., Takeshima, F., Snapper, S. B. & Mayer, B. J. Inducible clustering of membrane-targeted SH3 domains of the adaptor protein Nck triggers localized actin polymerization. Curr. Biol. 14, 11-22 (2004).
    • (2004) Curr. Biol. , vol.14 , pp. 11-22
    • Rivera, G.M.1    Briceño, C.A.2    Takeshima, F.3    Snapper, S.B.4    Mayer, B.J.5
  • 30
    • 84862604526 scopus 로고    scopus 로고
    • Stoichiometry of Nck-dependent actin polymerization in living cells
    • Ditlev, J. A. et al. Stoichiometry of Nck-dependent actin polymerization in living cells. J. Cell Biol. 197, 643-658 (2012).
    • (2012) J. Cell Biol. , vol.197 , pp. 643-658
    • Ditlev, J.A.1
  • 31
    • 84878566800 scopus 로고    scopus 로고
    • WIP provides an essential link between Nck and N-WASP during Arp2/3-dependent actin polymerization
    • Donnelly, S. K., Weisswange, I., Zettl, M. & Way, M. WIP provides an essential link between Nck and N-WASP during Arp2/3-dependent actin polymerization. Curr. Biol. 23, 999-1006 (2013).
    • (2013) Curr. Biol. , vol.23 , pp. 999-1006
    • Donnelly, S.K.1    Weisswange, I.2    Zettl, M.3    Way, M.4
  • 32
    • 55049090663 scopus 로고    scopus 로고
    • Hierarchical regulation of WASP/WAVE proteins
    • Padrick, S. B. et al. Hierarchical regulation of WASP/WAVE proteins. Mol. Cell 32, 426-438 (2008).
    • (2008) Mol. Cell , vol.32 , pp. 426-438
    • Padrick, S.B.1
  • 34
    • 0141866643 scopus 로고    scopus 로고
    • Long term association of the cytokine receptor gp130 and the Janus kinase Jak1 revealed by FRAP analysis
    • Giese, B. et al. Long term association of the cytokine receptor gp130 and the Janus kinase Jak1 revealed by FRAP analysis. J. Biol. Chem. 278, 39205-39213 (2003).
    • (2003) J. Biol. Chem. , vol.278 , pp. 39205-39213
    • Giese, B.1
  • 35
    • 34548417621 scopus 로고    scopus 로고
    • Fluorescent protein FRET: The good, the bad and the ugly
    • Piston, D. W. & Kremers, G.-J. Fluorescent protein FRET: the good, the bad and the ugly. Trends Biochem. Sci. 32, 407-414 (2007).
    • (2007) Trends Biochem. Sci. , vol.32 , pp. 407-414
    • Piston, D.W.1    Kremers, G.-J.2
  • 36
    • 0027185152 scopus 로고
    • T cell activation by clustered tyrosine kinases
    • Kolanus, W., Romeo, C. & Seed, B. T cell activation by clustered tyrosine kinases. Cell 74, 171-183 (1993).
    • (1993) Cell , vol.74 , pp. 171-183
    • Kolanus, W.1    Romeo, C.2    Seed, B.3
  • 37
    • 0027756895 scopus 로고
    • Controlling signal transduction with synthetic ligands
    • Spencer, D. M., Wandless, T. J., Schreiber, S. L. & Crabtree, G. R. Controlling signal transduction with synthetic ligands. Science 262, 1019-1024 (1993).
    • (1993) Science , vol.262 , pp. 1019-1024
    • Spencer, D.M.1    Wandless, T.J.2    Schreiber, S.L.3    Crabtree, G.R.4
  • 38
    • 84862776582 scopus 로고    scopus 로고
    • Phase transitions in the assembly of multivalent signalling proteins
    • Li, P. et al. Phase transitions in the assembly of multivalent signalling proteins. Nature 483, 336-340 (2012).
    • (2012) Nature , vol.483 , pp. 336-340
    • Li, P.1
  • 39
    • 84863229940 scopus 로고    scopus 로고
    • DNA-guided assembly of biosynthetic pathways promotes improved catalytic efficiency
    • Conrado, R. J. et al. DNA-guided assembly of biosynthetic pathways promotes improved catalytic efficiency. Nucleic Acids Res. 40, 1879-1889 (2012).
    • (2012) Nucleic Acids Res. , vol.40 , pp. 1879-1889
    • Conrado, R.J.1
  • 40
    • 84880960930 scopus 로고    scopus 로고
    • Engineering enzymatic cascades on nanoscale scaffolds
    • Idan, O. & Hess, H. Engineering enzymatic cascades on nanoscale scaffolds. Curr. Opin. Biotechnol. 24, 606-611 (2013).
    • (2013) Curr. Opin. Biotechnol. , vol.24 , pp. 606-611
    • Idan, O.1    Hess, H.2
  • 41
    • 72149095755 scopus 로고    scopus 로고
    • Eukaryotic stress granules: The ins and outs of translation
    • Buchan, J. R. & Parker, R. Eukaryotic stress granules: the ins and outs of translation. Mol. Cell 36, 932-941 (2009).
    • (2009) Mol. Cell , vol.36 , pp. 932-941
    • Buchan, J.R.1    Parker, R.2
  • 42
    • 79955770162 scopus 로고    scopus 로고
    • Scaffold proteins: Hubs for controlling the flow of cellular information
    • Good, M. C., Zalatan, J. G. & Lim, W. A. Scaffold proteins: hubs for controlling the flow of cellular information. Science 332, 680-686 (2011).
    • (2011) Science , vol.332 , pp. 680-686
    • Good, M.C.1    Zalatan, J.G.2    Lim, W.A.3
  • 43
    • 10044253425 scopus 로고    scopus 로고
    • AKAP signalling complexes: Focal points in space and time
    • Wong, W. & Scott, J. D. AKAP signalling complexes: focal points in space and time. Nat. Rev. Mol. Cell Biol. 5, 959-970 (2004).
    • (2004) Nat. Rev. Mol. Cell Biol. , vol.5 , pp. 959-970
    • Wong, W.1    Scott, J.D.2
  • 44
    • 33845396840 scopus 로고    scopus 로고
    • Plasticity-induced growth of dendritic spines by exocytic trafficking from recycling endosomes
    • Park, M. et al. Plasticity-induced growth of dendritic spines by exocytic trafficking from recycling endosomes. Neuron 52, 817-830 (2006).
    • (2006) Neuron , vol.52 , pp. 817-830
    • Park, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.