-
1
-
-
0036436741
-
Analysis of gene function in bacterial pathogens by GAMBIT
-
Akerley, B.J., and Lampe, D.J. (2002) Analysis of gene function in bacterial pathogens by GAMBIT. Methods Enzymol 358: 100-108.
-
(2002)
Methods Enzymol
, vol.358
, pp. 100-108
-
-
Akerley, B.J.1
Lampe, D.J.2
-
2
-
-
71449116162
-
Biological diversity of prokaryotic type IV secretion systems
-
Alvarez-Martinez, C.E., and Christie, P.J. (2009) Biological diversity of prokaryotic type IV secretion systems. Microbiol Mol Biol Rev 73: 775-808.
-
(2009)
Microbiol Mol Biol Rev
, vol.73
, pp. 775-808
-
-
Alvarez-Martinez, C.E.1
Christie, P.J.2
-
3
-
-
24644481914
-
Regulation of a Bacillus subtilis mobile genetic element by intercellular signaling and the global DNA damage response
-
Auchtung, J.M., Lee, C.A., Monson, R.E., Lehman, A.P., and Grossman, A.D. (2005) Regulation of a Bacillus subtilis mobile genetic element by intercellular signaling and the global DNA damage response. Proc Natl Acad Sci USA 102: 12554-12559.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 12554-12559
-
-
Auchtung, J.M.1
Lee, C.A.2
Monson, R.E.3
Lehman, A.P.4
Grossman, A.D.5
-
4
-
-
34249997536
-
Identification and characterization of the immunity repressor (ImmR) that controls the mobile genetic element ICEBs1 of Bacillus subtilis
-
Auchtung, J.M., Lee, C.A., Garrison, K.L., and Grossman, A.D. (2007) Identification and characterization of the immunity repressor (ImmR) that controls the mobile genetic element ICEBs1 of Bacillus subtilis. Mol Microbiol 64: 1515-1528.
-
(2007)
Mol Microbiol
, vol.64
, pp. 1515-1528
-
-
Auchtung, J.M.1
Lee, C.A.2
Garrison, K.L.3
Grossman, A.D.4
-
5
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
-
2006 0008
-
Baba, T., Ara, T., Hasegawa, M., Takai, Y., Okumura, Y., Baba, M., etal. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2: 2006 0008.
-
(2006)
Mol Syst Biol
, vol.2
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
-
6
-
-
0027491818
-
Cloning and molecular analysis of genes affecting expression of binding substance, the recipient-encoded receptor(s) mediating mating aggregate formation in Enterococcus faecalis
-
Bensing, B.A., and Dunny, G.M. (1993) Cloning and molecular analysis of genes affecting expression of binding substance, the recipient-encoded receptor(s) mediating mating aggregate formation in Enterococcus faecalis. J Bacteriol 175: 7421-7429.
-
(1993)
J Bacteriol
, vol.175
, pp. 7421-7429
-
-
Bensing, B.A.1
Dunny, G.M.2
-
7
-
-
73849096537
-
Polar positioning of a conjugation protein from the integrative and conjugative element ICEBs1 of Bacillus subtilis
-
Berkmen, M.B., Lee, C.A., Loveday, E.K., and Grossman, A.D. (2010) Polar positioning of a conjugation protein from the integrative and conjugative element ICEBs1 of Bacillus subtilis. J Bacteriol 192: 38-45.
-
(2010)
J Bacteriol
, vol.192
, pp. 38-45
-
-
Berkmen, M.B.1
Lee, C.A.2
Loveday, E.K.3
Grossman, A.D.4
-
8
-
-
84879889329
-
The expanding bacterial type IV secretion lexicon
-
Bhatty, M., Laverde Gomez, J.A., and Christie, P.J. (2013) The expanding bacterial type IV secretion lexicon. Res Microbiol 164: 620-639.
-
(2013)
Res Microbiol
, vol.164
, pp. 620-639
-
-
Bhatty, M.1
Laverde Gomez, J.A.2
Christie, P.J.3
-
9
-
-
0035163555
-
Development and characterization of a xylose-dependent system for expression of cloned genes in Bacillus subtilis: conditional complementation of a teichoic acid mutant
-
Bhavsar, A.P., Zhao, X., and Brown, E.D. (2001) Development and characterization of a xylose-dependent system for expression of cloned genes in Bacillus subtilis: conditional complementation of a teichoic acid mutant. Appl Environ Microbiol 67: 403-410.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 403-410
-
-
Bhavsar, A.P.1
Zhao, X.2
Brown, E.D.3
-
10
-
-
0021249403
-
Characteristics and function of thick and thin conjugative pili determined by transfer-derepressed plasmids of incompatibility groups I1, I2, I5, B, K and Z
-
Bradley, D.E. (1984) Characteristics and function of thick and thin conjugative pili determined by transfer-derepressed plasmids of incompatibility groups I1, I2, I5, B, K and Z. J Gen Microbiol 130: 1489-1502.
-
(1984)
J Gen Microbiol
, vol.130
, pp. 1489-1502
-
-
Bradley, D.E.1
-
11
-
-
0036425161
-
The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integration
-
Burrus, V., Pavlovic, G., Decaris, B., and Guedon, G. (2002) The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integration. Plasmid 48: 77-97.
-
(2002)
Plasmid
, vol.48
, pp. 77-97
-
-
Burrus, V.1
Pavlovic, G.2
Decaris, B.3
Guedon, G.4
-
12
-
-
0023219960
-
Two conjugation systems associated with Streptococcus faecalis plasmid pCF10: identification of a conjugative transposon that transfers between S. faecalis and Bacillus subtilis
-
Christie, P.J., Korman, R.Z., Zahler, S.A., Adsit, J.C., and Dunny, G.M. (1987) Two conjugation systems associated with Streptococcus faecalis plasmid pCF10: identification of a conjugative transposon that transfers between S. faecalis and Bacillus subtilis. J Bacteriol 169: 2529-2536.
-
(1987)
J Bacteriol
, vol.169
, pp. 2529-2536
-
-
Christie, P.J.1
Korman, R.Z.2
Zahler, S.A.3
Adsit, J.C.4
Dunny, G.M.5
-
13
-
-
27144463959
-
Biogenesis, architecture, and function of bacterial type IV secretion systems
-
Christie, P.J., Atmakuri, K., Krishnamoorthy, V., Jakubowski, S., and Cascales, E. (2005) Biogenesis, architecture, and function of bacterial type IV secretion systems. Annu Rev Microbiol 59: 451-485.
-
(2005)
Annu Rev Microbiol
, vol.59
, pp. 451-485
-
-
Christie, P.J.1
Atmakuri, K.2
Krishnamoorthy, V.3
Jakubowski, S.4
Cascales, E.5
-
14
-
-
0028011141
-
The Bacillus subtilis spoVD gene encodes a mother-cell-specific penicillin-binding protein required for spore morphogenesis
-
Daniel, R.A., Drake, S., Buchanan, C.E., Scholle, R., and Errington, J. (1994) The Bacillus subtilis spoVD gene encodes a mother-cell-specific penicillin-binding protein required for spore morphogenesis. J Mol Biol 235: 209-220.
-
(1994)
J Mol Biol
, vol.235
, pp. 209-220
-
-
Daniel, R.A.1
Drake, S.2
Buchanan, C.E.3
Scholle, R.4
Errington, J.5
-
15
-
-
84888589999
-
Enterococcal sex pheromones: signaling, social behavior, and evolution
-
Dunny, G.M. (2013) Enterococcal sex pheromones: signaling, social behavior, and evolution. Annu Rev Genet 47: 457-482.
-
(2013)
Annu Rev Genet
, vol.47
, pp. 457-482
-
-
Dunny, G.M.1
-
16
-
-
0342867597
-
Induced cell aggregation and mating in Streptococcus faecalis: evidence for a bacterial sex pheromone
-
Dunny, G.M., Brown, B.L., and Clewell, D.B. (1978) Induced cell aggregation and mating in Streptococcus faecalis: evidence for a bacterial sex pheromone. Proc Natl Acad Sci USA 75: 3479-3483.
-
(1978)
Proc Natl Acad Sci USA
, vol.75
, pp. 3479-3483
-
-
Dunny, G.M.1
Brown, B.L.2
Clewell, D.B.3
-
17
-
-
5644302167
-
A comprehensive proteome map of growing Bacillus subtilis cells
-
Eymann, C., Dreisbach, A., Albrecht, D., Bernhardt, J., Becher, D., Gentner, S., etal. (2004) A comprehensive proteome map of growing Bacillus subtilis cells. Proteomics 4: 2849-2876.
-
(2004)
Proteomics
, vol.4
, pp. 2849-2876
-
-
Eymann, C.1
Dreisbach, A.2
Albrecht, D.3
Bernhardt, J.4
Becher, D.5
Gentner, S.6
-
18
-
-
0026512822
-
Analysis of the autolysins of Bacillus subtilis 168 during vegetative growth and differentiation by using renaturing polyacrylamide gel electrophoresis
-
Foster, S.J. (1992) Analysis of the autolysins of Bacillus subtilis 168 during vegetative growth and differentiation by using renaturing polyacrylamide gel electrophoresis. J Bacteriol 174: 464-470.
-
(1992)
J Bacteriol
, vol.174
, pp. 464-470
-
-
Foster, S.J.1
-
19
-
-
23944506044
-
Mobile genetic elements: the agents of open source evolution
-
Frost, L.S., Leplae, R., Summers, A.O., and Toussaint, A. (2005) Mobile genetic elements: the agents of open source evolution. Nat Rev Microbiol 3: 722-732.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 722-732
-
-
Frost, L.S.1
Leplae, R.2
Summers, A.O.3
Toussaint, A.4
-
20
-
-
67349270900
-
Enzymatic assembly of DNA molecules up to several hundred kilobases
-
Gibson, D.G., Young, L., Chuang, R.Y., Venter, J.C., Hutchison, C.A., 3rd, and Smith, H.O. (2009) Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Methods 6: 343-345.
-
(2009)
Nat Methods
, vol.6
, pp. 343-345
-
-
Gibson, D.G.1
Young, L.2
Chuang, R.Y.3
Venter, J.C.4
Hutchison III, C.A.5
Smith, H.O.6
-
21
-
-
84887626226
-
Conjugative type IV secretion systems in Gram-positive bacteria
-
Goessweiner-Mohr, N., Arends, K., Keller, W., and Grohmann, E. (2013) Conjugative type IV secretion systems in Gram-positive bacteria. Plasmid 70: 289-302.
-
(2013)
Plasmid
, vol.70
, pp. 289-302
-
-
Goessweiner-Mohr, N.1
Arends, K.2
Keller, W.3
Grohmann, E.4
-
22
-
-
0031736387
-
Multimodular penicillin-binding proteins: an enigmatic family of orthologs and paralogs
-
Goffin, C., and Ghuysen, J.M. (1998) Multimodular penicillin-binding proteins: an enigmatic family of orthologs and paralogs. Microbiol Mol Biol Rev 62: 1079-1093.
-
(1998)
Microbiol Mol Biol Rev
, vol.62
, pp. 1079-1093
-
-
Goffin, C.1
Ghuysen, J.M.2
-
23
-
-
0030597337
-
Plasmids for ectopic integration in Bacillus subtilis
-
Guerout-Fleury, A.M., Frandsen, N., and Stragier, P. (1996) Plasmids for ectopic integration in Bacillus subtilis. Gene 180: 57-61.
-
(1996)
Gene
, vol.180
, pp. 57-61
-
-
Guerout-Fleury, A.M.1
Frandsen, N.2
Stragier, P.3
-
24
-
-
80052333445
-
The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation
-
Guglielmini, J., Quintais, L., Garcillan-Barcia, M.P., de la Cruz, F., and Rocha, E.P. (2011) The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation. PLoS Genet 7: e1002222.
-
(2011)
PLoS Genet
, vol.7
, pp. e1002222
-
-
Guglielmini, J.1
Quintais, L.2
Garcillan-Barcia, M.P.3
de la Cruz, F.4
Rocha, E.P.5
-
25
-
-
80051724197
-
Functional assignment of an enzyme that catalyzes the synthesis of an archaea-type ether lipid in bacteria
-
Guldan, H., Matysik, F.M., Bocola, M., Sterner, R., and Babinger, P. (2011) Functional assignment of an enzyme that catalyzes the synthesis of an archaea-type ether lipid in bacteria. Angew Chem Int Ed Engl 50: 8188-8191.
-
(2011)
Angew Chem Int Ed Engl
, vol.50
, pp. 8188-8191
-
-
Guldan, H.1
Matysik, F.M.2
Bocola, M.3
Sterner, R.4
Babinger, P.5
-
26
-
-
0038349278
-
Efficient sporulation in Clostridium difficile requires disruption of the sigmaK gene
-
Haraldsen, J.D., and Sonenshein, A.L. (2003) Efficient sporulation in Clostridium difficile requires disruption of the sigmaK gene. Mol Microbiol 48: 811-821.
-
(2003)
Mol Microbiol
, vol.48
, pp. 811-821
-
-
Haraldsen, J.D.1
Sonenshein, A.L.2
-
28
-
-
0017579951
-
Isolation and characterization of Escherichia coli K-12 F- mutants defective in conjugation with an I-type donor
-
Havekes, L., Tommassen, J., Hoekstra, W., and Lugtenberg, B. (1977) Isolation and characterization of Escherichia coli K-12 F- mutants defective in conjugation with an I-type donor. J Bacteriol 129: 1-8.
-
(1977)
J Bacteriol
, vol.129
, pp. 1-8
-
-
Havekes, L.1
Tommassen, J.2
Hoekstra, W.3
Lugtenberg, B.4
-
29
-
-
0037312744
-
KtrAB and KtrCD: two K+ uptake systems in Bacillus subtilis and their role in adaptation to hypertonicity
-
Holtmann, G., Bakker, E.P., Uozumi, N., and Bremer, E. (2003) KtrAB and KtrCD: two K+ uptake systems in Bacillus subtilis and their role in adaptation to hypertonicity. J Bacteriol 185: 1289-1298.
-
(2003)
J Bacteriol
, vol.185
, pp. 1289-1298
-
-
Holtmann, G.1
Bakker, E.P.2
Uozumi, N.3
Bremer, E.4
-
30
-
-
77951042893
-
MochiView: versatile software for genome browsing and DNA motif analysis
-
Homann, O.R., and Johnson, A.D. (2010) MochiView: versatile software for genome browsing and DNA motif analysis. BMC Biol 8: 49.
-
(2010)
BMC Biol
, vol.8
, pp. 49
-
-
Homann, O.R.1
Johnson, A.D.2
-
31
-
-
34250692637
-
Inhibition of lysine biosynthesis: an evolving antibiotic strategy
-
Hutton, C.A., Perugini, M.A., and Gerrard, J.A. (2007) Inhibition of lysine biosynthesis: an evolving antibiotic strategy. Mol Biosyst 3: 458-465.
-
(2007)
Mol Biosyst
, vol.3
, pp. 458-465
-
-
Hutton, C.A.1
Perugini, M.A.2
Gerrard, J.A.3
-
32
-
-
4744376093
-
PilV adhesins of plasmid R64 thin pili specifically bind to the lipopolysaccharides of recipient cells
-
Ishiwa, A., and Komano, T. (2004) PilV adhesins of plasmid R64 thin pili specifically bind to the lipopolysaccharides of recipient cells. J Mol Biol 343: 615-625.
-
(2004)
J Mol Biol
, vol.343
, pp. 615-625
-
-
Ishiwa, A.1
Komano, T.2
-
33
-
-
0024720167
-
Identification and characterization of genes controlled by the sporulation-regulatory gene spo0H in Bacillus subtilis
-
Jaacks, K.J., Healy, J., Losick, R., and Grossman, A.D. (1989) Identification and characterization of genes controlled by the sporulation-regulatory gene spo0H in Bacillus subtilis. J Bacteriol 171: 4121-4129.
-
(1989)
J Bacteriol
, vol.171
, pp. 4121-4129
-
-
Jaacks, K.J.1
Healy, J.2
Losick, R.3
Grossman, A.D.4
-
34
-
-
0021018979
-
Restriction and modification in Bacillus subtilis: sequence specificities of restriction/modification systems BsuM, BsuE, and BsuF
-
Jentsch, S. (1983) Restriction and modification in Bacillus subtilis: sequence specificities of restriction/modification systems BsuM, BsuE, and BsuF. J Bacteriol 156: 800-808.
-
(1983)
J Bacteriol
, vol.156
, pp. 800-808
-
-
Jentsch, S.1
-
35
-
-
0031848910
-
A UDP glucosyltransferase from Bacillus subtilis successively transfers up to four glucose residues to 1,2-diacylglycerol: expression of ypfP in Escherichia coli and structural analysis of its reaction products
-
Jorasch, P., Wolter, F.P., Zahringer, U., and Heinz, E. (1998) A UDP glucosyltransferase from Bacillus subtilis successively transfers up to four glucose residues to 1, 2-diacylglycerol: expression of ypfP in Escherichia coli and structural analysis of its reaction products. Mol Microbiol 29: 419-430.
-
(1998)
Mol Microbiol
, vol.29
, pp. 419-430
-
-
Jorasch, P.1
Wolter, F.P.2
Zahringer, U.3
Heinz, E.4
-
36
-
-
60149088444
-
Genomic islands: tools of bacterial horizontal gene transfer and evolution
-
Juhas, M., van der Meer, J.R., Gaillard, M., Harding, R.M., Hood, D.W., and Crook, D.W. (2009) Genomic islands: tools of bacterial horizontal gene transfer and evolution. FEMS Microbiol Rev 33: 376-393.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 376-393
-
-
Juhas, M.1
van der Meer, J.R.2
Gaillard, M.3
Harding, R.M.4
Hood, D.W.5
Crook, D.W.6
-
37
-
-
0026760151
-
The spoIIN279(ts) mutation affects the FtsA protein of Bacillus subtilis
-
Karmazyn-Campelli, C., Fluss, L., Leighton, T., and Stragier, P. (1992) The spoIIN279(ts) mutation affects the FtsA protein of Bacillus subtilis. Biochimie 74: 689-694.
-
(1992)
Biochimie
, vol.74
, pp. 689-694
-
-
Karmazyn-Campelli, C.1
Fluss, L.2
Leighton, T.3
Stragier, P.4
-
38
-
-
0033613113
-
Hyperactive transposase mutants of the Himar1 mariner transposon
-
Lampe, D.J., Akerley, B.J., Rubin, E.J., Mekalanos, J.J., and Robertson, H.M. (1999) Hyperactive transposase mutants of the Himar1 mariner transposon. Proc Natl Acad Sci USA 96: 11428-11433.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 11428-11433
-
-
Lampe, D.J.1
Akerley, B.J.2
Rubin, E.J.3
Mekalanos, J.J.4
Robertson, H.M.5
-
39
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead, B., Trapnell, C., Pop, M., and Salzberg, S.L. (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25.
-
(2009)
Genome Biol
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
40
-
-
0024470531
-
Detection of bacterial cell wall hydrolases after denaturing polyacrylamide gel electrophoresis
-
Leclerc, D., and Asselin, A. (1989) Detection of bacterial cell wall hydrolases after denaturing polyacrylamide gel electrophoresis. Can J Microbiol 35: 749-753.
-
(1989)
Can J Microbiol
, vol.35
, pp. 749-753
-
-
Leclerc, D.1
Asselin, A.2
-
41
-
-
36549062382
-
Identification and characterization of int (integrase), xis (excisionase) and chromosomal attachment sites of the integrative and conjugative element ICEBs1 of Bacillus subtilis
-
Lee, C.A., Auchtung, J.M., Monson, R.E., and Grossman, A.D. (2007) Identification and characterization of int (integrase), xis (excisionase) and chromosomal attachment sites of the integrative and conjugative element ICEBs1 of Bacillus subtilis. Mol Microbiol 66: 1356-1369.
-
(2007)
Mol Microbiol
, vol.66
, pp. 1356-1369
-
-
Lee, C.A.1
Auchtung, J.M.2
Monson, R.E.3
Grossman, A.D.4
-
42
-
-
74349093158
-
Autonomous plasmid-like replication of a conjugative transposon
-
Lee, C.A., Babic, A., and Grossman, A.D. (2010) Autonomous plasmid-like replication of a conjugative transposon. Mol Microbiol 75: 268-279.
-
(2010)
Mol Microbiol
, vol.75
, pp. 268-279
-
-
Lee, C.A.1
Babic, A.2
Grossman, A.D.3
-
43
-
-
84864008614
-
The Bacillus subtilis conjugative transposon ICEBs1 mobilizes plasmids lacking dedicated mobilization functions
-
Lee, C.A., Thomas, J., and Grossman, A.D. (2012) The Bacillus subtilis conjugative transposon ICEBs1 mobilizes plasmids lacking dedicated mobilization functions. J Bacteriol 194: 3165-3172.
-
(2012)
J Bacteriol
, vol.194
, pp. 3165-3172
-
-
Lee, C.A.1
Thomas, J.2
Grossman, A.D.3
-
44
-
-
0030031254
-
Molecular analysis of an operon in Bacillus subtilis encoding a novel ABC transporter with a role in exoprotein production, sporulation and competence
-
(Part 1)
-
Leskela, S., Kontinen, V.P., and Sarvas, M. (1996) Molecular analysis of an operon in Bacillus subtilis encoding a novel ABC transporter with a role in exoprotein production, sporulation and competence. Microbiology 142 (Part 1): 71-77.
-
(1996)
Microbiology
, vol.142
, pp. 71-77
-
-
Leskela, S.1
Kontinen, V.P.2
Sarvas, M.3
-
45
-
-
0025772125
-
Identification of aecA mutations in Bacillus subtilis as nucleotide substitutions in the untranslated leader region of the aspartokinase II operon
-
Lu, Y., Chen, N.Y., and Paulus, H. (1991) Identification of aecA mutations in Bacillus subtilis as nucleotide substitutions in the untranslated leader region of the aspartokinase II operon. J Gen Microbiol 137: 1135-1143.
-
(1991)
J Gen Microbiol
, vol.137
, pp. 1135-1143
-
-
Lu, Y.1
Chen, N.Y.2
Paulus, H.3
-
46
-
-
0037315095
-
Peptidoglycan synthesis in the absence of class A penicillin-binding proteins in Bacillus subtilis
-
McPherson, D.C., and Popham, D.L. (2003) Peptidoglycan synthesis in the absence of class A penicillin-binding proteins in Bacillus subtilis. J Bacteriol 185: 1423-1431.
-
(2003)
J Bacteriol
, vol.185
, pp. 1423-1431
-
-
McPherson, D.C.1
Popham, D.L.2
-
47
-
-
0034816354
-
Two class A high-molecular-weight penicillin-binding proteins of Bacillus subtilis play redundant roles in sporulation
-
McPherson, D.C., Driks, A., and Popham, D.L. (2001) Two class A high-molecular-weight penicillin-binding proteins of Bacillus subtilis play redundant roles in sporulation. J Bacteriol 183: 6046-6053.
-
(2001)
J Bacteriol
, vol.183
, pp. 6046-6053
-
-
McPherson, D.C.1
Driks, A.2
Popham, D.L.3
-
48
-
-
2542467872
-
tcaA inactivation increases glycopeptide resistance in Staphylococcus aureus
-
Maki, H., McCallum, N., Bischoff, M., Wada, A., and Berger-Bachi, B. (2004) tcaA inactivation increases glycopeptide resistance in Staphylococcus aureus. Antimicrob Agents Chemother 48: 1953-1959.
-
(2004)
Antimicrob Agents Chemother
, vol.48
, pp. 1953-1959
-
-
Maki, H.1
McCallum, N.2
Bischoff, M.3
Wada, A.4
Berger-Bachi, B.5
-
49
-
-
0019824792
-
traG protein of the F sex factor of Escherichia coli K-12 and its role in conjugation
-
Manning, P.A., Morelli, G., and Achtman, M. (1981) traG protein of the F sex factor of Escherichia coli K-12 and its role in conjugation. Proc Natl Acad Sci USA 78: 7487-7491.
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, pp. 7487-7491
-
-
Manning, P.A.1
Morelli, G.2
Achtman, M.3
-
50
-
-
0034666433
-
Characterization of YpmQ, an accessory protein required for the expression of cytochrome c oxidase in Bacillus subtilis
-
Mattatall, N.R., Jazairi, J., and Hill, B.C. (2000) Characterization of YpmQ, an accessory protein required for the expression of cytochrome c oxidase in Bacillus subtilis. J Biol Chem 275: 28802-28809.
-
(2000)
J Biol Chem
, vol.275
, pp. 28802-28809
-
-
Mattatall, N.R.1
Jazairi, J.2
Hill, B.C.3
-
51
-
-
84884286838
-
FtsEX is required for CwlO peptidoglycan hydrolase activity during cell wall elongation in Bacillus subtilis
-
Meisner, J., Montero Llopis, P., Sham, L.T., Garner, E., Bernhardt, T.G., and Rudner, D.Z. (2013) FtsEX is required for CwlO peptidoglycan hydrolase activity during cell wall elongation in Bacillus subtilis. Mol Microbiol 89: 1069-1083.
-
(2013)
Mol Microbiol
, vol.89
, pp. 1069-1083
-
-
Meisner, J.1
Montero Llopis, P.2
Sham, L.T.3
Garner, E.4
Bernhardt, T.G.5
Rudner, D.Z.6
-
52
-
-
84880790228
-
Selective pressures to maintain attachment site specificity of integrative and conjugative elements
-
Menard, K.L., and Grossman, A.D. (2013) Selective pressures to maintain attachment site specificity of integrative and conjugative elements. PLoS Genet 9: e1003623.
-
(2013)
PLoS Genet
, vol.9
, pp. e1003623
-
-
Menard, K.L.1
Grossman, A.D.2
-
53
-
-
0029820892
-
Identification and characterization of pbpC, the gene encoding Bacillus subtilis penicillin-binding protein 3
-
Murray, T., Popham, D.L., and Setlow, P. (1996) Identification and characterization of pbpC, the gene encoding Bacillus subtilis penicillin-binding protein 3. J Bacteriol 178: 6001-6005.
-
(1996)
J Bacteriol
, vol.178
, pp. 6001-6005
-
-
Murray, T.1
Popham, D.L.2
Setlow, P.3
-
54
-
-
0032425550
-
Analysis of outgrowth of Bacillus subtilis spores lacking penicillin-binding protein 2a
-
Murray, T., Popham, D.L., Pearson, C.B., Hand, A.R., and Setlow, P. (1998) Analysis of outgrowth of Bacillus subtilis spores lacking penicillin-binding protein 2a. J Bacteriol 180: 6493-6502.
-
(1998)
J Bacteriol
, vol.180
, pp. 6493-6502
-
-
Murray, T.1
Popham, D.L.2
Pearson, C.B.3
Hand, A.R.4
Setlow, P.5
-
55
-
-
0014757386
-
A general method applicable to the search for similarities in the amino acid sequence of two proteins
-
Needleman, S.B., and Wunsch, C.D. (1970) A general method applicable to the search for similarities in the amino acid sequence of two proteins. J Mol Biol 48: 443-453.
-
(1970)
J Mol Biol
, vol.48
, pp. 443-453
-
-
Needleman, S.B.1
Wunsch, C.D.2
-
56
-
-
67651033667
-
Conjugative plasmids: vessels of the communal gene pool
-
Norman, A., Hansen, L.H., and Sorensen, S.J. (2009) Conjugative plasmids: vessels of the communal gene pool. Philos Trans R Soc Lond B Biol Sci 364: 2275-2289.
-
(2009)
Philos Trans R Soc Lond B Biol Sci
, vol.364
, pp. 2275-2289
-
-
Norman, A.1
Hansen, L.H.2
Sorensen, S.J.3
-
57
-
-
79952276542
-
Genome-wide fitness and genetic interactions determined by Tn-seq, a high-throughput massively parallel sequencing method for microorganisms
-
Unit1E 3 Chapter
-
van Opijnen, T., and Camilli, A. (2010) Genome-wide fitness and genetic interactions determined by Tn-seq, a high-throughput massively parallel sequencing method for microorganisms. Curr Protoc Microbiol Chapter 1: Unit1E 3.
-
(2010)
Curr Protoc Microbiol
, vol.1
-
-
van Opijnen, T.1
Camilli, A.2
-
58
-
-
84879413726
-
Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms
-
van Opijnen, T., and Camilli, A. (2013) Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms. Nat Rev Microbiol 11: 435-442.
-
(2013)
Nat Rev Microbiol
, vol.11
, pp. 435-442
-
-
van Opijnen, T.1
Camilli, A.2
-
59
-
-
70349611730
-
Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms
-
van Opijnen, T., Bodi, K.L., and Camilli, A. (2009) Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms. Nat Methods 6: 767-772.
-
(2009)
Nat Methods
, vol.6
, pp. 767-772
-
-
van Opijnen, T.1
Bodi, K.L.2
Camilli, A.3
-
60
-
-
10344230938
-
Biosynthesis of diaminopimelate, the precursor of lysine and a component of peptidoglycan, is an essential function of Mycobacterium smegmatis
-
Pavelka, M.S., Jr, and Jacobs, W.R., Jr (1996) Biosynthesis of diaminopimelate, the precursor of lysine and a component of peptidoglycan, is an essential function of Mycobacterium smegmatis. J Bacteriol 178: 6496-6507.
-
(1996)
J Bacteriol
, vol.178
, pp. 6496-6507
-
-
Pavelka Jr, M.S.1
Jacobs Jr, W.R.2
-
61
-
-
0031715449
-
Characterization of dacC, which encodes a new low-molecular-weight penicillin-binding protein in Bacillus subtilis
-
Pedersen, L.B., Murray, T., Popham, D.L., and Setlow, P. (1998) Characterization of dacC, which encodes a new low-molecular-weight penicillin-binding protein in Bacillus subtilis. J Bacteriol 180: 4967-4973.
-
(1998)
J Bacteriol
, vol.180
, pp. 4967-4973
-
-
Pedersen, L.B.1
Murray, T.2
Popham, D.L.3
Setlow, P.4
-
62
-
-
0024026228
-
Sequence analysis and regulation of the hpr locus, a regulatory gene for protease production and sporulation in Bacillus subtilis
-
Perego, M., and Hoch, J.A. (1988) Sequence analysis and regulation of the hpr locus, a regulatory gene for protease production and sporulation in Bacillus subtilis. J Bacteriol 170: 2560-2567.
-
(1988)
J Bacteriol
, vol.170
, pp. 2560-2567
-
-
Perego, M.1
Hoch, J.A.2
-
63
-
-
60849100544
-
Escherichia coli genes affecting recipient ability in plasmid conjugation: are there any?
-
Perez-Mendoza, D., and de la Cruz, F. (2009) Escherichia coli genes affecting recipient ability in plasmid conjugation: are there any? BMC Genomics 10: 71.
-
(2009)
BMC Genomics
, vol.10
, pp. 71
-
-
Perez-Mendoza, D.1
de la Cruz, F.2
-
64
-
-
0035821289
-
Staphylococcus aureus resistance to human defensins and evasion of neutrophil killing via the novel virulence factor MprF is based on modification of membrane lipids with l-lysine
-
Peschel, A., Jack, R.W., Otto, M., Collins, L.V., Staubitz, P., Nicholson, G., etal. (2001) Staphylococcus aureus resistance to human defensins and evasion of neutrophil killing via the novel virulence factor MprF is based on modification of membrane lipids with l-lysine. J Exp Med 193: 1067-1076.
-
(2001)
J Exp Med
, vol.193
, pp. 1067-1076
-
-
Peschel, A.1
Jack, R.W.2
Otto, M.3
Collins, L.V.4
Staubitz, P.5
Nicholson, G.6
-
65
-
-
45449097639
-
Actinomycete integrative and conjugative elements
-
te Poele, E.M., Bolhuis, H., and Dijkhuizen, L. (2008) Actinomycete integrative and conjugative elements. Antonie Van Leeuwenhoek 94: 127-143.
-
(2008)
Antonie Van Leeuwenhoek
, vol.94
, pp. 127-143
-
-
te Poele, E.M.1
Bolhuis, H.2
Dijkhuizen, L.3
-
66
-
-
0028104377
-
Cloning, nucleotide sequence, mutagenesis, and mapping of the Bacillus subtilis pbpD gene, which codes for penicillin-binding protein 4
-
Popham, D.L., and Setlow, P. (1994) Cloning, nucleotide sequence, mutagenesis, and mapping of the Bacillus subtilis pbpD gene, which codes for penicillin-binding protein 4. J Bacteriol 176: 7197-7205.
-
(1994)
J Bacteriol
, vol.176
, pp. 7197-7205
-
-
Popham, D.L.1
Setlow, P.2
-
67
-
-
0028835462
-
Cloning, nucleotide sequence, and mutagenesis of the Bacillus subtilis ponA operon, which codes for penicillin-binding protein (PBP) 1 and a PBP-related factor
-
Popham, D.L., and Setlow, P. (1995) Cloning, nucleotide sequence, and mutagenesis of the Bacillus subtilis ponA operon, which codes for penicillin-binding protein (PBP) 1 and a PBP-related factor. J Bacteriol 177: 326-335.
-
(1995)
J Bacteriol
, vol.177
, pp. 326-335
-
-
Popham, D.L.1
Setlow, P.2
-
68
-
-
0029904736
-
Analysis of the peptidoglycan structure of Bacillus subtilis endospores
-
Popham, D.L., Helin, J., Costello, C.E., and Setlow, P. (1996) Analysis of the peptidoglycan structure of Bacillus subtilis endospores. J Bacteriol 178: 6451-6458.
-
(1996)
J Bacteriol
, vol.178
, pp. 6451-6458
-
-
Popham, D.L.1
Helin, J.2
Costello, C.E.3
Setlow, P.4
-
69
-
-
0032932349
-
Roles of low-molecular-weight penicillin-binding proteins in Bacillus subtilis spore peptidoglycan synthesis and spore properties
-
Popham, D.L., Gilmore, M.E., and Setlow, P. (1999) Roles of low-molecular-weight penicillin-binding proteins in Bacillus subtilis spore peptidoglycan synthesis and spore properties. J Bacteriol 181: 126-132.
-
(1999)
J Bacteriol
, vol.181
, pp. 126-132
-
-
Popham, D.L.1
Gilmore, M.E.2
Setlow, P.3
-
70
-
-
57349161246
-
Phenotypic and transcriptomic characterization of Bacillus subtilis mutants with grossly altered membrane composition
-
Salzberg, L.I., and Helmann, J.D. (2008) Phenotypic and transcriptomic characterization of Bacillus subtilis mutants with grossly altered membrane composition. J Bacteriol 190: 7797-7807.
-
(2008)
J Bacteriol
, vol.190
, pp. 7797-7807
-
-
Salzberg, L.I.1
Helmann, J.D.2
-
71
-
-
0019842602
-
Influence of lipopolysaccharide and protein in the cell envelope on recipient capacity in conjugation of Salmonella typhimurium
-
Sanderson, K.E., Janzer, J., and Head, J. (1981) Influence of lipopolysaccharide and protein in the cell envelope on recipient capacity in conjugation of Salmonella typhimurium. J Bacteriol 148: 283-293.
-
(1981)
J Bacteriol
, vol.148
, pp. 283-293
-
-
Sanderson, K.E.1
Janzer, J.2
Head, J.3
-
72
-
-
39149088656
-
The penicillin-binding proteins: structure and role in peptidoglycan biosynthesis
-
Sauvage, E., Kerff, F., Terrak, M., Ayala, J.A., and Charlier, P. (2008) The penicillin-binding proteins: structure and role in peptidoglycan biosynthesis. FEMS Microbiol Rev 32: 234-258.
-
(2008)
FEMS Microbiol Rev
, vol.32
, pp. 234-258
-
-
Sauvage, E.1
Kerff, F.2
Terrak, M.3
Ayala, J.A.4
Charlier, P.5
-
73
-
-
0023247275
-
Mutations affecting penicillin-binding proteins 2a, 2b and 3 in Bacillus subtilis alter cell shape and peptidoglycan metabolism
-
Shohayeb, M., and Chopra, I. (1987) Mutations affecting penicillin-binding proteins 2a, 2b and 3 in Bacillus subtilis alter cell shape and peptidoglycan metabolism. J Gen Microbiol 133: 1733-1742.
-
(1987)
J Gen Microbiol
, vol.133
, pp. 1733-1742
-
-
Shohayeb, M.1
Chopra, I.2
-
74
-
-
0016265357
-
Con- mutants: class of mutants in Escherichia coli K-12 lacking a major cell wall protein and defective in conjugation and adsorption of a bacteriophage
-
Skurray, R.A., Hancock, R.E., and Reeves, P. (1974) Con- mutants: class of mutants in Escherichia coli K-12 lacking a major cell wall protein and defective in conjugation and adsorption of a bacteriophage. J Bacteriol 119: 726-735.
-
(1974)
J Bacteriol
, vol.119
, pp. 726-735
-
-
Skurray, R.A.1
Hancock, R.E.2
Reeves, P.3
-
75
-
-
0031614678
-
A hidden Markov model for predicting transmembrane helices in protein sequences
-
Sonnhammer, E.L., von Heijne, G., and Krogh, A. (1998) A hidden Markov model for predicting transmembrane helices in protein sequences. Proc Int Conf Intell Syst Mol Biol 6: 175-182.
-
(1998)
Proc Int Conf Intell Syst Mol Biol
, vol.6
, pp. 175-182
-
-
Sonnhammer, E.L.1
von Heijne, G.2
Krogh, A.3
-
76
-
-
0020558202
-
Changes in penicillin-binding proteins during sporulation of Bacillus subtilis
-
Sowell, M.O., and Buchanan, C.E. (1983) Changes in penicillin-binding proteins during sporulation of Bacillus subtilis. J Bacteriol 153: 1331-1337.
-
(1983)
J Bacteriol
, vol.153
, pp. 1331-1337
-
-
Sowell, M.O.1
Buchanan, C.E.2
-
77
-
-
22544460491
-
YycH regulates the activity of the essential YycFG two-component system in Bacillus subtilis
-
Szurmant, H., Nelson, K., Kim, E.J., Perego, M., and Hoch, J.A. (2005) YycH regulates the activity of the essential YycFG two-component system in Bacillus subtilis. J Bacteriol 187: 5419-5426.
-
(2005)
J Bacteriol
, vol.187
, pp. 5419-5426
-
-
Szurmant, H.1
Nelson, K.2
Kim, E.J.3
Perego, M.4
Hoch, J.A.5
-
78
-
-
28444440285
-
Proteomics-based consensus prediction of protein retention in a bacterial membrane
-
Tjalsma, H., and van Dijl, J.M. (2005) Proteomics-based consensus prediction of protein retention in a bacterial membrane. Proteomics 5: 4472-4482.
-
(2005)
Proteomics
, vol.5
, pp. 4472-4482
-
-
Tjalsma, H.1
van Dijl, J.M.2
-
79
-
-
0025095884
-
Mutants of Enterococcus faecalis deficient as recipients in mating with donors carrying pheromone-inducible plasmids
-
Trotter, K.M., and Dunny, G.M. (1990) Mutants of Enterococcus faecalis deficient as recipients in mating with donors carrying pheromone-inducible plasmids. Plasmid 24: 57-67.
-
(1990)
Plasmid
, vol.24
, pp. 57-67
-
-
Trotter, K.M.1
Dunny, G.M.2
-
80
-
-
0014930570
-
Effects of cell wall polysaccharide on the mating ability of Salmonella typhimurium
-
Watanabe, T., Arai, T., and Hattori, T. (1970) Effects of cell wall polysaccharide on the mating ability of Salmonella typhimurium. Nature 225: 70-71.
-
(1970)
Nature
, vol.225
, pp. 70-71
-
-
Watanabe, T.1
Arai, T.2
Hattori, T.3
-
81
-
-
0042561877
-
Rod shape determination by the Bacillus subtilis class B penicillin-binding proteins encoded by pbpA and pbpH
-
Wei, Y., Havasy, T., McPherson, D.C., and Popham, D.L. (2003) Rod shape determination by the Bacillus subtilis class B penicillin-binding proteins encoded by pbpA and pbpH. J Bacteriol 185: 4717-4726.
-
(2003)
J Bacteriol
, vol.185
, pp. 4717-4726
-
-
Wei, Y.1
Havasy, T.2
McPherson, D.C.3
Popham, D.L.4
-
82
-
-
78751681333
-
Enzymatic activities and functional interdependencies of Bacillus subtilis lipoteichoic acid synthesis enzymes
-
Wormann, M.E., Corrigan, R.M., Simpson, P.J., Matthews, S.J., and Grundling, A. (2011) Enzymatic activities and functional interdependencies of Bacillus subtilis lipoteichoic acid synthesis enzymes. Mol Microbiol 79: 566-583.
-
(2011)
Mol Microbiol
, vol.79
, pp. 566-583
-
-
Wormann, M.E.1
Corrigan, R.M.2
Simpson, P.J.3
Matthews, S.J.4
Grundling, A.5
-
83
-
-
77954761569
-
Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow
-
Wozniak, R.A., and Waldor, M.K. (2010) Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow. Nat Rev Microbiol 8: 552-563.
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 552-563
-
-
Wozniak, R.A.1
Waldor, M.K.2
-
84
-
-
0028205413
-
Catabolite repression of the Bacillus subtilis hut operon requires a cis-acting site located downstream of the transcription initiation site
-
Wray, L.V., Jr, Pettengill, F.K., and Fisher, S.H. (1994) Catabolite repression of the Bacillus subtilis hut operon requires a cis-acting site located downstream of the transcription initiation site. J Bacteriol 176: 1894-1902.
-
(1994)
J Bacteriol
, vol.176
, pp. 1894-1902
-
-
Wray Jr, L.V.1
Pettengill, F.K.2
Fisher, S.H.3
-
85
-
-
0026179573
-
Molecular cloning and analysis of nucleotide sequence of the Bacillus subtilis lysA gene region using B. subtilis phage vectors and a multi-copy plasmid, pUB110
-
Yamamoto, J., Shimizu, M., and Yamane, K. (1991) Molecular cloning and analysis of nucleotide sequence of the Bacillus subtilis lysA gene region using B. subtilis phage vectors and a multi-copy plasmid, pUB110. Agric Biol Chem 55: 1615-1626.
-
(1991)
Agric Biol Chem
, vol.55
, pp. 1615-1626
-
-
Yamamoto, J.1
Shimizu, M.2
Yamane, K.3
-
86
-
-
0027489263
-
Cloning and sequencing of the cell division gene pbpB, which encodes penicillin-binding protein 2B in Bacillus subtilis
-
Yanouri, A., Daniel, R.A., Errington, J., and Buchanan, C.E. (1993) Cloning and sequencing of the cell division gene pbpB, which encodes penicillin-binding protein 2B in Bacillus subtilis. J Bacteriol 175: 7604-7616.
-
(1993)
J Bacteriol
, vol.175
, pp. 7604-7616
-
-
Yanouri, A.1
Daniel, R.A.2
Errington, J.3
Buchanan, C.E.4
-
87
-
-
0017349566
-
Bacillus subtilis bacteriophage SPbeta: localization of the prophage attachment site, and specialized transduction
-
Zahler, S.A., Korman, R.Z., Rosenthal, R., and Hemphill, H.E. (1977) Bacillus subtilis bacteriophage SPbeta: localization of the prophage attachment site, and specialized transduction. J Bacteriol 129: 556-558.
-
(1977)
J Bacteriol
, vol.129
, pp. 556-558
-
-
Zahler, S.A.1
Korman, R.Z.2
Rosenthal, R.3
Hemphill, H.E.4
|