메뉴 건너뛰기




Volumn 5, Issue 2, 2014, Pages 101-113

Applying linked data approaches to pharmacology: Architectural decisions and implementation

Author keywords

data integration; linked data; pharmacology

Indexed keywords


EID: 84908353448     PISSN: 15700844     EISSN: 22104968     Source Type: Journal    
DOI: 10.3233/SW-2012-0088     Document Type: Article
Times cited : (55)

References (45)
  • 3
    • 0033963089 scopus 로고    scopus 로고
    • The ENZYME database in 2000
    • doi:10.1093/nar/28.1.304
    • A. Bairoch, The ENZYME database in 2000, Nucleic Acids Research 28 (2000), 304-305. doi:10.1093/nar/28.1.304.
    • (2000) Nucleic Acids Research , vol.28 , pp. 304-305
    • Bairoch, A.1
  • 4
    • 6044271269 scopus 로고    scopus 로고
    • Swissprot: Juggling between evolution and stability
    • doi:10.1093/bib/5.1.39
    • A. Bairoch, B. Boeckmann, S. Ferro, and E. Gasteiger, Swissprot: Juggling between evolution and stability, Briefings in Bioinformatics 5(1) (2004), 39-58. doi:10.1093/bib/5.1.39.
    • (2004) Briefings in Bioinformatics , vol.5 , Issue.1 , pp. 39-58
    • Bairoch, A.1    Boeckmann, B.2    Ferro, S.3    Gasteiger, E.4
  • 7
    • 48249158190 scopus 로고    scopus 로고
    • Bio2RDF: Towards a mashup to build bioinformatics knowledge systems
    • doi:10.1016/j.jbi.2008.03.004
    • F. Belleau, M.-A. Nolin, N. Tourigny, P. Rigault, and J. Morissette, Bio2RDF: Towards a mashup to build bioinformatics knowledge systems, Journal of Biomedical Informatics 41(5) (2008), 706-716. doi:10.1016/j.jbi.2008.03.004.
    • (2008) Journal of Biomedical Informatics , vol.41 , Issue.5 , pp. 706-716
    • Belleau, F.1    Nolin, M.-A.2    Tourigny, N.3    Rigault, P.4    Morissette, J.5
  • 9
    • 84866262574 scopus 로고    scopus 로고
    • Sesame: A generic architecture for storing and querying rdf and rdf schema
    • Springer, Berlin/Heidelberg, doi:10.1007/3-540-48005-6-7
    • J. Broekstra, A. Kampman, and F. van Harmelen, Sesame: A generic architecture for storing and querying rdf and rdf schema, in: First International Semantic Web Conference (ISWC 2002), Springer, Berlin/Heidelberg, 2002, pp. 54-68. doi:10.1007/3-540-48005-6-7.
    • (2002) First International Semantic Web Conference (ISWC 2002) , pp. 54-68
    • Broekstra, J.1    Kampman, A.2    Van Harmelen, F.3
  • 11
    • 77953907294 scopus 로고    scopus 로고
    • Chem2Bio2RDF: A semantic framework for linking and data mining chemogenomic and systems chemical biology data
    • doi:10.1186/1471-2105-11-255
    • B. Chen, X. Dong, D. Jiao, H. Wang, Q. Zhu, Y. Ding, and D.J. Wild, Chem2Bio2RDF: A semantic framework for linking and data mining chemogenomic and systems chemical biology data, BMC Bioinformatics 11(1) (2010), 255. doi:10.1186/1471-2105-11-255.
    • (2010) BMC Bioinformatics , vol.11 , Issue.1 , pp. 255
    • Chen, B.1    Dong, X.2    Jiao, D.3    Wang, H.4    Zhu, Q.5    Ding, Y.6    Wild, D.J.7
  • 12
    • 79959275513 scopus 로고    scopus 로고
    • Semantic web integration of cheminformatics resources with the SADI framework
    • L.L. Chepelev and M. Dumontier, Semantic web integration of cheminformatics resources with the SADI framework, Journal of Cheminformatics 3(1) (2011), 16. http://www.jcheminf. com/content/3/1/16.
    • (2011) Journal of Cheminformatics , vol.3 , Issue.1 , pp. 16
    • Chepelev, L.L.1    Dumontier, M.2
  • 14
    • 84860833500 scopus 로고    scopus 로고
    • Reorganizing the protein space at the universal protein resource (UniProt)
    • The UniProt Consortium doi:10.1093/nar/gkr981
    • The UniProt Consortium, Reorganizing the protein space at the universal protein resource (UniProt). Nucleic Acids Research 40(D1) (2012), D71-D75. doi:10.1093/nar/gkr981.
    • (2012) Nucleic Acids Research , vol.40 , Issue.D1
  • 15
    • 59949087987 scopus 로고    scopus 로고
    • The design and realisation of the myExperiment virtual research environment for social sharing of workflows
    • doi:10.1016/j.future.2008.06.010
    • D. De Roure, C. Goble, and R. Stevens, The design and realisation of the myExperiment virtual research environment for social sharing of workflows, Future Generation Computer Systems 25 (2009), 561-567. doi:10.1016/j.future. 2008.06.010.
    • (2009) Future Generation Computer Systems , vol.25 , pp. 561-567
    • De Roure, D.1    Goble, C.2    Stevens, R.3
  • 20
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: A comprehensive approach for supporting accessible reproducible, and transparent computational research in the life sciences
    • The Galaxy Team 8 doi:10.1186/gb-2010-11-8-r86
    • J. Goecks, A. Nekrutenko, J. Taylor, and The Galaxy Team, Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences, Genome Biology 11(8) (2010), R86, 8. doi:10.1186/gb-2010-11-8-r86.
    • (2010) Genome Biology , vol.11 , Issue.8
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3
  • 23
    • 78649330533 scopus 로고    scopus 로고
    • 4store: The design and implementation of a clustered rdf store
    • S. Harris, N. Lamb, and N. Shadbolt, 4store: The design and implementation of a clustered rdf store. Time 42(8) (2009), 81- 96. http://ftp.informatik.rwth-aachen.de/Publications/CEURWS/ Vol-517/ssws09-paper7. pdf.
    • (2009) Time , vol.42 , Issue.8 , pp. 81-96
    • Harris, S.1    Lamb, N.2    Shadbolt, N.3
  • 24
    • 85046448768 scopus 로고    scopus 로고
    • 1st ed. Synthesis Lectures on the Semantic Web: Theory and Technology, Morgan & Claypool, doi:10.2200/S00334ED1V01Y201102WBE001
    • T. Heath and C. Bizer, Linked Data: Evolving the Web into a Global Data Space, 1st ed. Synthesis Lectures on the Semantic Web: Theory and Technology, Vol. 1, Morgan & Claypool, 2011. doi:10.2200/S00334ED1V01Y201102WBE001.
    • (2011) Linked Data: Evolving the Web into A Global Data Space , vol.1
    • Heath, T.1    Bizer, C.2
  • 27
    • 84862156032 scopus 로고    scopus 로고
    • Identifiers.org and MIRIAM registry: Community resources to provide persistent identification
    • doi:10.1093/nar/gkr1097
    • N. Juty, N. Le Novere, and C. Laibe, Identifiers.org and MIRIAM registry: Community resources to provide persistent identification, Nucleic Acids Research 40(D1) (2012), D580- D586. doi:10.1093/nar/gkr1097.
    • (2012) Nucleic Acids Research , vol.40 , Issue.D1
    • Juty, N.1    Le Novere, N.2    Laibe, C.3
  • 28
    • 84858983547 scopus 로고    scopus 로고
    • Kegg for integration and interpretation of large-scale molecular datasets
    • doi:10.1093/nar/gkr988
    • M. Kanehisa, S. Goto, Y. Sato, M. Furumichi, and M. Tanabe, Kegg for integration and interpretation of large-scale molecular datasets, Nucleic Acids Research 40 (2012), D109-114. doi:10.1093/nar/gkr988.
    • (2012) Nucleic Acids Research , vol.40
    • Kanehisa, M.1    Goto, S.2    Sato, Y.3    Furumichi, M.4    Tanabe, M.5
  • 35
  • 36
    • 7944225347 scopus 로고    scopus 로고
    • What the semantic web could do for the life sciences
    • doi:10.1016/S1741- 8364(04)02420-5
    • E.K. Neumann, E. Miller, and J. Wilbanks, What the semantic web could do for the life sciences, Drug Discovery Today: BIOSILICO 2(6) (2004), 228-236. doi:10.1016/S1741- 8364(04)02420-5.
    • (2004) Drug Discovery Today: BIOSILICO , vol.2 , Issue.6 , pp. 228-236
    • Neumann, E.K.1    Miller, E.2    Wilbanks, J.3
  • 37
    • 78449296488 scopus 로고    scopus 로고
    • ChemSpider: An online chemical information resource
    • doi:10.1021/ed100697w
    • H.E. Pence and A.Williams, ChemSpider: An online chemical information resource, Journal of Chemical Education 87(11) (2010), 1123-1124. doi:10.1021/ed100697w.
    • (2010) Journal of Chemical Education , vol.87 , Issue.11 , pp. 1123-1124
    • Pence, H.E.1    Williams, A.2
  • 38
    • 63349084462 scopus 로고    scopus 로고
    • Life sciences on the Semantic Web: The Neurocommons and beyond
    • doi:10.1093/bib/bbp004
    • A. Ruttenberg, J.A. Rees, M. Samwald, and M.S. Marshall, Life sciences on the Semantic Web: The Neurocommons and beyond, Briefings in Bioinformatics 10(2) (2009), 193-204. doi:10.1093/bib/bbp004.
    • (2009) Briefings in Bioinformatics , vol.10 , Issue.2 , pp. 193-204
    • Ruttenberg, A.1    Rees, J.A.2    Samwald, M.3    Marshall, M.S.4
  • 41
    • 80055049544 scopus 로고    scopus 로고
    • Fedx: Optimization techniques for federated query processing on linked data
    • Springer-Verlag, Berlin, Heidelberg. doi:10.1007/978-3-642-25073-6-38
    • A. Schwarte, P. Haase, K. Hose, R. Schenkel, and M. Schmidt, Fedx: Optimization techniques for federated query processing on linked data, in: International Semantic Web Conference (1), Springer-Verlag, Berlin, Heidelberg, 2011, pp. 601-616. doi:10.1007/978-3-642-25073-6-38.
    • (2011) International Semantic Web Conference (1) , pp. 601-616
    • Schwarte, A.1    Haase, P.2    Hose, K.3    Schenkel, R.4    Schmidt, M.5
  • 42
    • 84940262785 scopus 로고    scopus 로고
    • SYSTAP, LLC, Bigdata: Approaching web scale for the semantic web, Whitepaper, SYSTAP, LLC
    • SYSTAP, LLC, Bigdata: Approaching web scale for the semantic web, Whitepaper, SYSTAP, LLC, 2009. http://www. bigdata.com/whitepapers/bigdata- whitepaper-07-08-2009.pdf.
    • (2009)


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.