Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing

ISME Journal

Volumn 8, Issue 11, 2014, Pages 2243-2255

  Beliaev, Alexander S ^a   Romine, Margie F ^a   Serres, Margrethe ^b   Bernstein, Hans C ^a   Linggi, Bryan E ^c   Markillie, Lye M ^a   Isern, Nancy G ^c   Chrisler, William B ^a   Kucek, Leo A ^a,f   Hill, Eric A ^a   Pinchuk, Grigoriy E ^a   Bryant, Donald A ^d,e   Steven Wiley, H ^c   Fredrickson, Jim K ^a   Konopka, Allan ^a  

^a PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

^b MARINE BIOLOGICAL LABORATORY   (United States)

^c PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

^d PENNSYLVANIA STATE UNIVERSITY   (United States)

^e MONTANA STATE UNIVERSITY   (United States)

^f Department of Biological and Environmental Engineering   (United States)

Author keywords

co culture; microbial interactions; cyanobacterium; heterotroph; SOLiD sequencing; transcriptome

Indexed keywords

ADAPTATION; CARBON FLUX; CULTIVATION; CYANOBACTERIUM; GENE EXPRESSION; GROWTH RATE; METABOLISM; RNA; SECRETION;

CYANOBACTERIA;

CARBON; TRANSCRIPTOME;

COCULTURE; GENE EXPRESSION PROFILING; GENETICS; GROWTH, DEVELOPMENT AND AGING; HETEROTROPHY; HIGH THROUGHPUT SEQUENCING; METABOLISM; ORGANISMAL INTERACTION; OXIDATIVE STRESS; SHEWANELLA PUTREFACIENS; SYNECHOCOCCUS;

CARBON; COCULTURE TECHNIQUES; GENE EXPRESSION PROFILING; HETEROTROPHIC PROCESSES; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MICROBIAL INTERACTIONS; OXIDATIVE STRESS; SHEWANELLA PUTREFACIENS; SYNECHOCOCCUS; TRANSCRIPTOME;

EID: 84908258100     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2014.69     Document Type: Article

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