Large-scale comparative phenotypic and genomic analyses reveal ecological preferences of Shewanella species and identify metabolic pathways conserved at the genus level

Applied and Environmental Microbiology

Volumn 77, Issue 15, 2011, Pages 5352-5360

  Rodrigues, Jorge L M ^a   Serres, Margrethe H ^b   Tiedje, James M ^c  

^a UNIVERSITY OF TEXAS AT ARLINGTON   (United States)

^b MARINE BIOLOGICAL LABORATORY   (United States)

^c MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMAZON RIVER; COMPARATIVE GENOMICS; DEEP MARINE SEDIMENTS; DEGRADATION PATHWAYS; ECOLOGICAL PREFERENCES; EVOLUTIONARY DISTANCE; GENE PRODUCTS; GENETIC ANALYSIS; GENOME ANALYSIS; GENOMIC ANALYSIS; HIGH-THROUGHPUT; LIMITING STEP; METABOLIC PATHWAYS; MICROBIAL GENOME SEQUENCING; NUTRIENT SOURCES; SHEWANELLA; SHEWANELLA SP; SHEWANELLA STRAIN;

ANOXIC SEDIMENTS; DNA SEQUENCES; ECOLOGY; GENETIC ENGINEERING; NUTRIENTS; SUBMARINE GEOLOGY;

GENES;

BACTERIAL DNA; CARBON; NITROGEN; PHOSPHORUS; RIBOSOME DNA; RNA 16S; SULFUR;

ARRAY; BACTERIUM; COMPARATIVE STUDY; CONSERVATION GENETICS; ECOLOGICAL APPROACH; ENVIRONMENTAL DEGRADATION; GENETIC ANALYSIS; GENOME; GENOMICS; GENOTYPE; GROWTH RATE; IDENTIFICATION METHOD; LIMITING FACTOR; MARINE SEDIMENT; METABOLISM; MICROBIOLOGY; MUTATION; NICHE; NITROGEN; NUTRIENT CYCLING; PHENOTYPE; SPECIALIZATION;

ARTICLE; CLASSIFICATION; COMPARATIVE STUDY; DNA SEQUENCE; ECOSYSTEM; ENERGY METABOLISM; GENETICS; GENOMICS; GENOTYPE; METABOLISM; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; PHYSIOLOGY; SHEWANELLA;

BASE SEQUENCE; CARBON; DNA, BACTERIAL; DNA, RIBOSOMAL; ECOSYSTEM; ENERGY METABOLISM; GENOMICS; GENOTYPE; METABOLIC NETWORKS AND PATHWAYS; NITROGEN; PHENOTYPE; PHOSPHORUS; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SHEWANELLA; SULFUR;

AMAZON RIVER;

SHEWANELLA; SHEWANELLA AMAZONENSIS; SHEWANELLA SP.;

EID: 79961049020     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00097-11     Document Type: Article

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