De novo transcriptome assembly for rudimentary leaves in Litchi chinesis Sonn. and identification of differentially expressed genes in response to reactive oxygen species

BMC Genomics

Volumn 15, Issue 1, 2014, Pages

  Lu, Xingyu ^a   Kim, Hyeji ^b   Zhong, Silin ^c   Chen, Houbin ^a   Hu, Zhiqun ^a   Zhou, Biyan ^a  

^a SOUTH CHINA AGRICULTURAL UNIVERSITY   (China)

^b PURDUE UNIVERSITY   (United States)

^c CHINESE UNIVERSITY OF HONG KONG   (Hong Kong)

Author keywords

Abortion; Flowering; Litchi; Reactive oxygen species; Rudimentary leaf; Transcriptome

Indexed keywords

ABSCISIC ACID; AUXIN; BRASSINOSTEROID; CYTOKININ; ETHYLENE; F BOX PROTEIN; GIBBERELLIN; JASMONIC ACID; MITOGEN ACTIVATED PROTEIN KINASE 6; REACTIVE OXYGEN METABOLITE; TRANSCRIPTION FACTOR SNF; TRANSCRIPTOME; VIOLOGEN; PARAQUAT;

ABORTION; ARABIDOPSIS THALIANA; ARTICLE; BARREL MEDIC; DOWN REGULATION; EXPRESSED SEQUENCE TAG; FLORAL WHORL; FLOWERING; GENE EXPRESSION; GENE IDENTIFICATION; GENE ONTOLOGY; GENE SEQUENCE; GLUCONEOGENESIS; GLYCINE (PLANT); GLYCOLYSIS; LYCHEE; MOLECULAR GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT GENETICS; PLANT LEAF; POPULUS TRICHOCARPA; PROTEIN ASSEMBLY; PURINE METABOLISM; REAL TIME POLYMERASE CHAIN REACTION; RIBOSOME; RNA SEQUENCE; RNA TRANSPORT; SEQUENCE HOMOLOGY; SHOOT; SIGNAL TRANSDUCTION; SPLICEOSOME; SUPPRESSION SUBTRACTIVE HYBRIDIZATION; UPREGULATION; DRUG EFFECTS; GENETICS; METABOLISM; NUCLEIC ACID DATABASE; PLANT GENE; PROTEIN DATABASE; SEQUENCE ANALYSIS;

DATABASES, NUCLEIC ACID; DATABASES, PROTEIN; EXPRESSED SEQUENCE TAGS; GENES, PLANT; LITCHI; MOLECULAR SEQUENCE ANNOTATION; PARAQUAT; PLANT LEAVES; REACTIVE OXYGEN SPECIES; REAL-TIME POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, RNA; TRANSCRIPTOME;

EID: 84908069884     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-15-805     Document Type: Article

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