Molecular description of the lcst behavior of an elastin-like polypeptide

Biomacromolecules

Volumn 15, Issue 10, 2014, Pages 3522-3530

  Li, Nan K ^a   Quiroz, Felipe García ^a   Hall, Carol K ^b   Chilkoti, Ashutosh ^a   Yingling, Yaroslava G ^a  

^a North Carolina State University   (United States)

^b Duke University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ELASTIN-LIKE POLYPEPTIDES; MOLECULAR DESCRIPTIONS;

ELASTIN; ELASTIN LIKE POLYPEPTIDE; PEPTIDE; POLYPEPTIDE; PROLINE; PROTEIN; SOLVENT; UNCLASSIFIED DRUG; VALINE; WATER; OLIGOPEPTIDE; SOLUTION AND SOLUBILITY; VALYL-PROLYL-GLYCYL-VALYL-GLYCINE;

AQUEOUS SOLUTION; ARTICLE; CONFORMATIONAL TRANSITION; HYDROGEN BOND; HYDROPHOBICITY; LOWER CRITICAL SOLUTION TEMPERATURE; MOLECULAR DYNAMICS; MOLECULAR INTERACTION; MOLECULAR MECHANICS; MOLECULE; PHASE TRANSITION; PROTEIN INTERACTION; PROTEIN SECONDARY STRUCTURE; TEMPERATURE; TEMPERATURE DEPENDENCE; CHEMICAL PHENOMENA; CHEMISTRY; COLD; SOLUTION AND SOLUBILITY; TRANSITION TEMPERATURE;

COLD TEMPERATURE; ELASTIN; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; OLIGOPEPTIDES; PEPTIDES; PROTEIN STRUCTURE, SECONDARY; SOLUTIONS; SOLVENTS; TRANSITION TEMPERATURE; WATER;

EID: 84907970159     PISSN: 15257797     EISSN: 15264602     Source Type: Journal    
DOI: 10.1021/bm500658w     Document Type: Article

References (60)

1. Bressan, G. M.; Argos, P.; Stanley, K. K. Biochemistry 1987, 26, 1497-1503
2. Muiznieks, L. D.; Keeley, F. W. Biophys. J. 2011, 100, 199-199
3. Debelle, L.; Tamburro, A. M. Int. J. Biochem. Cell Biol. 1999, 31, 261-272
4. He, D.; Chung, M.; Chan, E.; Alleyne, T.; Ha, K. C. H.; Miao, M.; Stahl, R. J.; Keeley, F. W.; Parkinson, J. Matrix Biol. 2007, 26, 524-540
5. Urry, D. W. Sci. Am. 1995, 272, 64-69
6. Martino, M.; Perri, T.; Tamburro, A. M. Macromol. Biosci. 2002, 2, 319-328
7. Urry, D. W. Faraday Discuss. 1976, 61, 205-212
8. Urry, D. W. Angew. Chem., Int. Ed. 1993, 32, 819-841
9. Reguera, J.; Urry, D. W.; Parker, T. M.; McPherson, D. T.; Rodriguez-Cabello, J. C. Biomacromolecules 2007, 8, 354-358
10. Urry, D. W. J. Phys. Chem. B 1997, 101, 11007-11028
11. Urry, D. W.; Luan, C. H.; Parker, T. M.; Gowda, D. C.; Prasad, K. U.; Reid, M. C.; Safavy, A. J. Am. Chem. Soc. 1991, 113, 4346-4348
12. Meyer, D. E.; Chilkoti, A. Biomacromolecules 2004, 5, 846-851
13. Meyer, D. E.; Shin, B. C.; Kong, G. A.; Dewhirst, M. W.; Chilkoti, A. J. Controlled Release 2001, 74, 213-224
14. Meyer, D. E.; Chilkoti, A. Nat. Biotechnol. 1999, 17, 1112-1115
15. Ge, X.; Yang, D. S. C.; Trabbic-Carlson, K.; Kim, B.; Chilkoti, A.; Filipe, C. D. M. J. Am. Chem. Soc. 2005, 127, 11228-11229
16. McDaniel, J. R.; Bhattacharyya, J.; Vargo, K. B.; Hassouneh, W.; Hammer, D. A.; Chilkoti, A. Angew. Chem., Int. Ed. 2013, 52, 1683-1687
17. Dreher, M. R.; Raucher, D.; Balu, N.; Colvin, O. M.; Ludeman, S. M.; Chilkoti, A. J. Controlled Release 2003, 91, 31-43
18. Lim, D. W.; Nettles, D. L.; Setton, L. A.; Chilkoti, A. Biomacromolecules 2007, 8, 1463-1470
19. McHale, M. K.; Setton, L. A.; Chilkoti, A. Tissue Eng. 2005, 11, 1768-1779
20. Tamburro, A. M. Nanomedicine 2009, 4, 469-487
21. Chen, Y. L.; Guan, Z. B. J. Am. Chem. Soc. 2010, 132, 4577-4579
22. Amiram, M.; Quiroz, F. G.; Callahan, D. J.; Chilkoti, A. Nat. Mater. 2011, 10, 141-148
23. Urry, D. W.; Long, M. M.; Cox, B. A.; Ohnishi, T.; Mitchell, L. W.; Jacobs, M. Biochim. Biophys. Acta 1974, 371, 597-602
24. Luan, C. H.; Urry, D. W. J. Phys. Chem. 1991, 95, 7896-7900
25. Rodriguez-Cabello, J. C.; Alonso, M.; Perez, T.; Herguedas, M. M. Biopolymers 2000, 54, 282-288
26. Henze, R.; Urry, D. W. J. Am. Chem. Soc. 1985, 107, 2991-2993
27. Pepe, A.; Armenante, M. R.; Bochicchio, B.; Tamburro, A. M. Soft Matter 2009, 5, 104-113
28. Lessing, J.; Roy, S.; Reppert, M.; Baer, M.; Marx, D.; Jansen, T. L. C.; Knoester, J.; Tokmakoff, A. J. Am. Chem. Soc. 2012, 134, 5032-5035
29. Urry, D. W.; Khaled, M. A.; Rapaka, R. S.; Okamoto, K. Biochem. Biophys. Res. Commun. 1977, 79, 700-706
30. Asakura, T.; Ashida, J.; Ohgo, K. Polym. J. 2003, 35, 293-296
31. Hong, M.; Isailovic, D.; McMillan, R. A.; Conticello, V. P. Biopolymers 2003, 70, 158-168
32. Urry, D. W. J. Protein Chem. 1988, 7, 1-34
33. Urry, D. W.; Trapane, T. L.; Sugano, H.; Prasad, K. U. J. Am. Chem. Soc. 1981, 103, 2080-2089
34. Ohgo, K.; Ashida, J.; Kumashiro, K. K.; Asakura, T. Macromolecules 2005, 38, 6038-6047
35. Reiersen, H.; Clarke, A. R.; Rees, A. R. J. Mol. Biol. 1998, 283, 255-264
36. Gross, P. C.; Possart, W.; Zeppezauer, M. Z. Naturforsch., C: J. Biosci. 2003, 58, 873-878
37. Yao, X. L.; Hong, M. J. Am. Chem. Soc. 2004, 126, 4199-4210
38. Rousseau, R.; Schreiner, E.; Kohlmeyer, A.; Marx, D. Biophys. J. 2004, 86, 1393-1407
39. Krukau, A.; Brovchenko, I.; Geiger, A. Biomacromolecules 2007, 8, 2196-2202
40. Li, B.; Alonso, D. O. V.; Daggett, V. J. Mol. Biol. 2001, 305, 581-592
41. Case, D. A.; Darden, T. A.; T.E. Cheatham, I.; Simmerling, C. L.; Wang, J.; Duke, R. E.; Luo, R.; Walker, R. C.; Zhang, W.; Merz, K. M.; Roberts, B.; Hayik, S.; Roitberg, A.; Seabra, G.; Swails, J.; Goetz, A. W.; Kolossváry, I.; Wong, K. F.; Paesani, F.; Vanicek, J.; Wolf, R. M.; Liu, J.; Wu, X.; Brozell, S. R.; Steinbrecher, T.; Gohlke, H.; Cai, Q.; Ye, X.; Wang, J.; Hsieh, M.-J.; Cui, G.; Roe, D. R.; Mathews, D. H.; Seetin, M. G.; Salomon-Ferrer, R.; Sagui, C.; Babin, V.; Luchko, T.; Gusarov, S.; Kovalenko, A.; Kollman, P. A. AMBER 11; University of California: San Francisco, 2011.
42. Jorgensen, W. L.; Chandrasekhar, J.; Madura, J. D.; Impey, R. W.; Klein, M. L. J. Chem. Phys. 1983, 79, 926-935
43. Essmann, U.; Perera, L.; Berkowitz, M. L.; Darden, T.; Lee, H.; Pedersen, L. G. J. Chem. Phys. 1995, 103, 8577-8593
44. Berendsen, H. J. C.; Postma, J. P. M.; Vangunsteren, W. F.; Dinola, A.; Haak, J. R. J. Chem. Phys. 1984, 81, 3684-3690
45. Ryckaert, J.-P.; Ciccotti, G.; Berendsen, H. J. C. J. Comput. Phys. 1977, 23, 327-341
46. Phillips, J. C.; Braun, R.; Wang, W.; Gumbart, J.; Tajkhorshid, E.; Villa, E.; Chipot, C.; Skeel, R. D.; Kale, L.; Schulten, K. J. Comput. Chem. 2005, 26, 1781-1802
47. Shao, J. Y.; Tanner, S. W.; Thompson, N.; Cheatham, T. E. J. Chem. Theory. Comput. 2007, 3, 2312-2334
48. Deshmukh, S. A.; Sankaranarayanan, S. K. R. S.; Suthar, K.; Mancini, D. C. J. Phys. Chem. B 2012, 116, 2651-2663
49. Rauscher, S.; Baud, S.; Miao, M.; Keeley, F. W.; Pomes, R. Structure 2006, 14, 1667-1676
50. Kabsch, W.; Sander, C. Biopolymers 1983, 22, 2577-2637
51. Tamburro, A. M.; Bochicchio, B.; Pepe, A. Biochemistry 2003, 42, 13347-13362
52. Oleinikova, A.; Brovchenko, I. Phys. Chem. Chem. Phys. 2012, 14, 5686
53. Vogel, M. J. Phys. Chem. B 2009, 113, 9386-9392
54. Oleinikova, A.; Brovchenko, I. J. Phys. Chem. Lett. 2011, 2, 765-769
55. Wernet, P.; Nordlund, D.; Bergmann, U.; Cavalleri, M.; Odelius, M.; Ogasawara, H.; Naslund, L. A.; Hirsch, T. K.; Ojamae, L.; Glatzel, P.; Pettersson, L. G. M.; Nilsson, A. Science 2004, 304, 995-999
56. Chothia, C. Nature 1974, 248, 338-339
57. Miller, S.; Janin, J.; Lesk, A. M.; Chothia, C. J. Mol. Biol. 1987, 196, 641-656
58. Miao, M.; Bellingham, C. M.; Stahl, R. J.; Sitarz, E. E.; Lane, C. J.; Keeley, F. W. J. Biol. Chem. 2003, 278, 48553-48562
59. Ma, B. Y.; Nussinov, R. J. Mol. Biol. 2000, 296, 1091-1104
60. Muiznieks, L. D.; Weiss, A. S.; Keeley, F. W. Biochem. Cell Biol. 2010, 88, 239-250