메뉴 건너뛰기




Volumn 53, Issue 35, 2014, Pages 5692-5699

Investigating the physiological roles of low-efficiency D-mannonate and D-gluconate dehydratases in the enolase superfamily: Pathways for the catabolism of L-gulonate and L-idonate

Author keywords

[No Author keywords available]

Indexed keywords

D-GLUCONATES; ENOLASE; PHYSIOLOGICAL ROLES;

EID: 84907520580     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi500837w     Document Type: Article
Times cited : (10)

References (23)
  • 1
    • 36049048325 scopus 로고    scopus 로고
    • Evolution of enzymatic activities in the enolase superfamily: D -Mannonate dehydratase from Novosphingobium aromaticivorans
    • Rakus, J. F., Fedorov, A. A., Fedorov, E. V., Glasner, M. E., Vick, J. E., Babbitt, P. C., Almo, S. C., and Gerlt, J. A. (2007) Evolution of enzymatic activities in the enolase superfamily: d -Mannonate dehydratase from Novosphingobium aromaticivorans Biochemistry 46 (45) 12896-12908
    • (2007) Biochemistry , vol.46 , Issue.45 , pp. 12896-12908
    • Rakus, J.F.1    Fedorov, A.A.2    Fedorov, E.V.3    Glasner, M.E.4    Vick, J.E.5    Babbitt, P.C.6    Almo, S.C.7    Gerlt, J.A.8
  • 2
    • 33845401627 scopus 로고    scopus 로고
    • Evolution of enzymatic activities in the enolase superfamily: L -Fuconate dehydratase from Xanthomonas campestris
    • Yew, W. S., Fedorov, A. A., Fedorov, E. V., Rakus, J. F., Pierce, R. W., Almo, S. C., and Gerlt, J. A. (2006) Evolution of enzymatic activities in the enolase superfamily: l -Fuconate dehydratase from Xanthomonas campestris Biochemistry 45, 14582-14597
    • (2006) Biochemistry , vol.45 , pp. 14582-14597
    • Yew, W.S.1    Fedorov, A.A.2    Fedorov, E.V.3    Rakus, J.F.4    Pierce, R.W.5    Almo, S.C.6    Gerlt, J.A.7
  • 3
    • 0034712668 scopus 로고    scopus 로고
    • Evolution of enzymatic activities in the enolase superfamily: Crystallographic and mutagenesis studies of the reaction catalyzed by d -glucarate dehydratase from Escherichia coli
    • Gulick, A. M., Hubbard, B. K., Gerlt, J. A., and Rayment, I. (2000) Evolution of enzymatic activities in the enolase superfamily: Crystallographic and mutagenesis studies of the reaction catalyzed by d -glucarate dehydratase from Escherichia coli Biochemistry 39, 4590-4602
    • (2000) Biochemistry , vol.39 , pp. 4590-4602
    • Gulick, A.M.1    Hubbard, B.K.2    Gerlt, J.A.3    Rayment, I.4
  • 5
    • 0034923923 scopus 로고    scopus 로고
    • Divergent evolution of enzymatic function: Mechanistically diverse superfamilies and functionally distinct suprafamilies
    • Gerlt, J. A. and Babbitt, P. C. (2001) Divergent evolution of enzymatic function: Mechanistically diverse superfamilies and functionally distinct suprafamilies Annu. Rev. Biochem. 70, 209-246
    • (2001) Annu. Rev. Biochem. , vol.70 , pp. 209-246
    • Gerlt, J.A.1    Babbitt, P.C.2
  • 6
    • 9744279773 scopus 로고    scopus 로고
    • Divergent evolution in the enolase superfamily: The interplay of mechanism and specificity
    • Gerlt, J. A., Babbit, P. C., and Rayment, I. (2005) Divergent evolution in the enolase superfamily: The interplay of mechanism and specificity Arch. Biochem. Biophys. 433, 59-70
    • (2005) Arch. Biochem. Biophys. , vol.433 , pp. 59-70
    • Gerlt, J.A.1    Babbit, P.C.2    Rayment, I.3
  • 8
    • 84903734297 scopus 로고    scopus 로고
    • Identification of the physiological role of a high efficiency enolase superfamily member mannonate dehydratase in Caulobacter crescentus NA1000
    • Wichelecki, D. J., Graff, D. C., Al-Obaidi, N., Almo, S. C., and Gerlt, J. A. (2014) Identification of the physiological role of a high efficiency enolase superfamily member mannonate dehydratase in Caulobacter crescentus NA1000 Biochemistry 53, 4087-4089
    • (2014) Biochemistry , vol.53 , pp. 4087-4089
    • Wichelecki, D.J.1    Graff, D.C.2    Al-Obaidi, N.3    Almo, S.C.4    Gerlt, J.A.5
  • 9
    • 0034916345 scopus 로고    scopus 로고
    • Chromohalobacter salexigens sp. Nov., a moderately halophilic species that includes Halomonas elongata DSM 3043 and ATCC 33174
    • Arahal, D. R., Garcia, M. T., Vargas, C., Canovas, D., Nieto, J. J., and Ventosa, A. (2001) Chromohalobacter salexigens sp. nov., a moderately halophilic species that includes Halomonas elongata DSM 3043 and ATCC 33174 Int. J. Syst. Evol. Microbiol. 51, 1457-1462
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 1457-1462
    • Arahal, D.R.1    Garcia, M.T.2    Vargas, C.3    Canovas, D.4    Nieto, J.J.5    Ventosa, A.6
  • 10
    • 9244243641 scopus 로고    scopus 로고
    • Two Outer Membrane Proteins are Required for Maximal Type i Secretion of the Caulobacter crescentus S-Layer Protein
    • Toporowski, M. C., Nomellini, J. F., Awram, P., and Smit, J. (2004) Two Outer Membrane Proteins are Required for Maximal Type I Secretion of the Caulobacter crescentus S-Layer Protein J. Bacteriol. 186, 8000-8009
    • (2004) J. Bacteriol. , vol.186 , pp. 8000-8009
    • Toporowski, M.C.1    Nomellini, J.F.2    Awram, P.3    Smit, J.4
  • 11
    • 1342325451 scopus 로고    scopus 로고
    • Transcriptional Profiling of Caulobacter crescentus during Growth on Complex and Minimal Media
    • Hottes, A. K., Meewan, M., Yang, D., Arana, N., Romero, P., McAdams, H. H., and Stephens, C. (2003) Transcriptional Profiling of Caulobacter crescentus during Growth on Complex and Minimal Media J. Bacteriol. 186, 1448-1461
    • (2003) J. Bacteriol. , vol.186 , pp. 1448-1461
    • Hottes, A.K.1    Meewan, M.2    Yang, D.3    Arana, N.4    Romero, P.5    McAdams, H.H.6    Stephens, C.7
  • 12
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko, K. A. and Wanner, B. L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products Proc. Natl. Acad. Sci. U.S.A. 97, 6640-6645
    • (2000) Proc. Natl. Acad. Sci. U.S.A. , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 13
    • 0345039454 scopus 로고
    • Enzymes of glucuronic and galacturonic acid metabolism in bacteria
    • Ashwel, G. (1962) Enzymes of glucuronic and galacturonic acid metabolism in bacteria Methods Enzymol. 5, 190-208
    • (1962) Methods Enzymol. , vol.5 , pp. 190-208
    • Ashwel, G.1
  • 14
    • 69949111845 scopus 로고    scopus 로고
    • Crystal Structures of Streptococcus suis Mannonate Dehydratase (ManD) and Its Complex with Substrate: Genetic and Biochemical Evidence for a Catalytic Mechanism
    • Zhang, Q., Gao, F., Peng, H., Cheng, H., Liu, Y., Tang, J., Thompson, J., Wei, G., Zhang, J., Du, Y., Yan, J., and Gao, G. F. (2009) Crystal Structures of Streptococcus suis Mannonate Dehydratase (ManD) and Its Complex with Substrate: Genetic and Biochemical Evidence for a Catalytic Mechanism J. Bacteriol. 191, 5832-5837
    • (2009) J. Bacteriol. , vol.191 , pp. 5832-5837
    • Zhang, Q.1    Gao, F.2    Peng, H.3    Cheng, H.4    Liu, Y.5    Tang, J.6    Thompson, J.7    Wei, G.8    Zhang, J.9    Du, Y.10    Yan, J.11    Gao, G.F.12
  • 15
    • 0014570787 scopus 로고
    • Hexuronic acid dehydrogenase of Agrobacterium tumefaciens
    • Chang, Y. F. and Feingold, D. S. (1969) Hexuronic acid dehydrogenase of Agrobacterium tumefaciens J. Bacteriol. 99, 667-673
    • (1969) J. Bacteriol. , vol.99 , pp. 667-673
    • Chang, Y.F.1    Feingold, D.S.2
  • 16
    • 0017251476 scopus 로고
    • Uronic acid dehydrogenase from Pseudomonas syringae. Purification and properties
    • Wagner, G. and Hollmann, S. (1976) Uronic acid dehydrogenase from Pseudomonas syringae. Purification and properties Eur. J. Biochem. 61, 589-596
    • (1976) Eur. J. Biochem. , vol.61 , pp. 589-596
    • Wagner, G.1    Hollmann, S.2
  • 17
    • 0011195193 scopus 로고
    • Bacterial conversion of d -glucarate to glycerate and pyruvate
    • Blumenthal, H. J. and Fish, D. C. (1963) Bacterial conversion of d -glucarate to glycerate and pyruvate Biochem. Biophys. Res. Commun. 11, 239-243
    • (1963) Biochem. Biophys. Res. Commun. , vol.11 , pp. 239-243
    • Blumenthal, H.J.1    Fish, D.C.2
  • 18
    • 84893704201 scopus 로고    scopus 로고
    • Galactaro δ-lactone isomerase: Lactone isomerization by a member of the amidohydrolase superfamily
    • Bouvier, J. T., Groninger-Poe, F. P., Vetting, M., Almo, S. C., and Gerlt, J. A. (2014) Galactaro δ-lactone isomerase: Lactone isomerization by a member of the amidohydrolase superfamily Biochemistry 53, 614-616
    • (2014) Biochemistry , vol.53 , pp. 614-616
    • Bouvier, J.T.1    Groninger-Poe, F.P.2    Vetting, M.3    Almo, S.C.4    Gerlt, J.A.5
  • 19
    • 84861209586 scopus 로고    scopus 로고
    • Characterization of a novel Agrobacterium tumefaciens galactarolactone cycloisomerase enzyme for direct conversion of d -galactarolactone to 3-deoxy-2-keto- l -threo-hexarate
    • Andberg, M., Maaheimo, H., Boer, H., Penttilä, M., Koivula, A., and Richard, P. (2012) Characterization of a novel Agrobacterium tumefaciens galactarolactone cycloisomerase enzyme for direct conversion of d -galactarolactone to 3-deoxy-2-keto- l -threo-hexarate J. Biol. Chem. 287, 17662-17671
    • (2012) J. Biol. Chem. , vol.287 , pp. 17662-17671
    • Andberg, M.1    Maaheimo, H.2    Boer, H.3    Penttilä, M.4    Koivula, A.5    Richard, P.6
  • 20
    • 0019326887 scopus 로고
    • The pathway for l -gulonate catabolism in Escherichia coli K-12 and Salmonella typhimurium LT-2
    • Cooper, R. A. (1980) The pathway for l -gulonate catabolism in Escherichia coli K-12 and Salmonella typhimurium LT-2 FEBS Lett. 115, 63-67
    • (1980) FEBS Lett. , vol.115 , pp. 63-67
    • Cooper, R.A.1
  • 21
    • 0032447867 scopus 로고    scopus 로고
    • Sequence analysis of the GntII (subsidiary) system for gluconate metabolism reveals a novel pathway for l -idonic acid catabolism in Escherichia coli
    • Bausch, C., Peekhaus, N., Utz, C., Blais, T., Murray, E., Lowary, T., and Conway, T. (1998) Sequence analysis of the GntII (subsidiary) system for gluconate metabolism reveals a novel pathway for l -idonic acid catabolism in Escherichia coli J. Bacteriol. 180, 3704-3710
    • (1998) J. Bacteriol. , vol.180 , pp. 3704-3710
    • Bausch, C.1    Peekhaus, N.2    Utz, C.3    Blais, T.4    Murray, E.5    Lowary, T.6    Conway, T.7
  • 22
    • 0017272554 scopus 로고
    • Enzyme recruitment in evolution of new function
    • Jenson, R. A. (1976) Enzyme recruitment in evolution of new function Annu. Rev. Microbiol. 30, 409-425
    • (1976) Annu. Rev. Microbiol. , vol.30 , pp. 409-425
    • Jenson, R.A.1
  • 23
    • 36749020130 scopus 로고    scopus 로고
    • Protein engineers turned evolutionists
    • Peisajovich, S. G. and Tawfik, D. S. (2007) Protein engineers turned evolutionists Nat. Methods 4, 991-994
    • (2007) Nat. Methods , vol.4 , pp. 991-994
    • Peisajovich, S.G.1    Tawfik, D.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.