-
1
-
-
79958059617
-
Structure-based insights into the catalytic power and conformational dexterity of peroxiredoxins
-
A. Hall, K. Nelson, L.B. Poole, and P.A. Karplus Structure-based insights into the catalytic power and conformational dexterity of peroxiredoxins Antioxid. Redox Signal. 15 2011 795 815
-
(2011)
Antioxid. Redox Signal.
, vol.15
, pp. 795-815
-
-
Hall, A.1
Nelson, K.2
Poole, L.B.3
Karplus, P.A.4
-
2
-
-
42249088093
-
Reconciling the chemistry and biology of reactive oxygen species
-
C.C. Winterbourn Reconciling the chemistry and biology of reactive oxygen species Nat. Chem. Biol. 4 2008 278 286
-
(2008)
Nat. Chem. Biol.
, vol.4
, pp. 278-286
-
-
Winterbourn, C.C.1
-
3
-
-
73849144014
-
Mitochondrial peroxiredoxin involvement in antioxidant defence and redox signalling
-
A.G. Cox, C.C. Winterbourn, and M.B. Hampton Mitochondrial peroxiredoxin involvement in antioxidant defence and redox signalling Biochem. J. 425 2009 313 325
-
(2009)
Biochem. J.
, vol.425
, pp. 313-325
-
-
Cox, A.G.1
Winterbourn, C.C.2
Hampton, M.B.3
-
4
-
-
0030805979
-
Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12
-
A.J. Link, K. Robison, and G.M. Church Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12 Electrophoresis 18 1997 1259 1313
-
(1997)
Electrophoresis
, vol.18
, pp. 1259-1313
-
-
Link, A.J.1
Robison, K.2
Church, G.M.3
-
5
-
-
0024785396
-
Identification and molecular analysis of oxyR-regulated promoters important for the bacterial adaptation to oxidative stress
-
L.A. Tartaglia, G. Storz, and B.N. Ames Identification and molecular analysis of oxyR-regulated promoters important for the bacterial adaptation to oxidative stress J. Mol. Biol. 210 1989 709 719
-
(1989)
J. Mol. Biol.
, vol.210
, pp. 709-719
-
-
Tartaglia, L.A.1
Storz, G.2
Ames, B.N.3
-
6
-
-
0030032612
-
Flavin-dependent alkyl hydroperoxide reductase from Salmonella typhimurium. 1. Purification and enzymatic activities of overexpressed AhpF and AhpC proteins
-
L.B. Poole, and H.R. Ellis Flavin-dependent alkyl hydroperoxide reductase from Salmonella typhimurium. 1. Purification and enzymatic activities of overexpressed AhpF and AhpC proteins Biochemistry 35 1996 56 64
-
(1996)
Biochemistry
, vol.35
, pp. 56-64
-
-
Poole, L.B.1
Ellis, H.R.2
-
7
-
-
0025365949
-
Alkyl hydroperoxide reductase from Salmonella typhimurium. Sequence and homology to thioredoxin reductase and other flavoprotein disulfide oxidoreductases
-
L.A. Tartaglia, G. Storz, M.H. Brodsky, A. Lai, and B.N. Ames Alkyl hydroperoxide reductase from Salmonella typhimurium. Sequence and homology to thioredoxin reductase and other flavoprotein disulfide oxidoreductases J. Biol. Chem. 265 1990 10535 10540
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 10535-10540
-
-
Tartaglia, L.A.1
Storz, G.2
Brodsky, M.H.3
Lai, A.4
Ames, B.N.5
-
8
-
-
0035799315
-
Structure of intact AhpF reveals a mirrored thioredoxin-like active site and implies large domain rotations during catalysis
-
Z.A. Wood, L.B. Poole, and P.A. Karplus Structure of intact AhpF reveals a mirrored thioredoxin-like active site and implies large domain rotations during catalysis Biochemistry 40 2001 3900 3911
-
(2001)
Biochemistry
, vol.40
, pp. 3900-3911
-
-
Wood, Z.A.1
Poole, L.B.2
Karplus, P.A.3
-
9
-
-
84907489894
-
The ups and downs in AhpF: Structure, mechanism and ensemble formation of the alkylhydroperoxide reductase subunits AhpC and AhpF from Escherichia coli
-
(manuscript No be5266, in press)
-
P.V. Dip, N. Kamariah, M.S.S. Manimekalai, W. Nartey, A.M. Balakrishna, F. Eisenhaber, B. Eisenhaber, and G. Grüber The ups and downs in AhpF: structure, mechanism and ensemble formation of the alkylhydroperoxide reductase subunits AhpC and AhpF from Escherichia coli Acta Crystallogr. D Biol. Crystallogr. 2014 (manuscript No be5266, in press)
-
(2014)
Acta Crystallogr. D Biol. Crystallogr.
-
-
Dip, P.V.1
Kamariah, N.2
Manimekalai, M.S.S.3
Nartey, W.4
Balakrishna, A.M.5
Eisenhaber, F.6
Eisenhaber, B.7
Grüber, G.8
-
10
-
-
0037197672
-
Dimers to doughnuts: Redox-sensitive oligomerization of 2-cysteine peroxiredoxins
-
Z.A. Wood, L.B. Poole, R.R. Hantgan, and P.A. Karplus Dimers to doughnuts: redox-sensitive oligomerization of 2-cysteine peroxiredoxins Biochemistry 41 2002 5493 5504
-
(2002)
Biochemistry
, vol.41
, pp. 5493-5504
-
-
Wood, Z.A.1
Poole, L.B.2
Hantgan, R.R.3
Karplus, P.A.4
-
11
-
-
0242668686
-
Peroxiredoxin evolution and the regulation of hydrogen peroxide signaling
-
Z.A. Wood, L.B. Poole, and P.A. Karplus Peroxiredoxin evolution and the regulation of hydrogen peroxide signaling Science 300 2003 650 653
-
(2003)
Science
, vol.300
, pp. 650-653
-
-
Wood, Z.A.1
Poole, L.B.2
Karplus, P.A.3
-
12
-
-
84055178426
-
Structural insights into the peroxidase activity and inactivation of human peroxiredoxin 4
-
X. Wang, L. Wang, X. Wang, F. Sun, and C.C. Wang Structural insights into the peroxidase activity and inactivation of human peroxiredoxin 4 Biochem. J. 441 2012 113 118
-
(2012)
Biochem. J.
, vol.441
, pp. 113-118
-
-
Wang, X.1
Wang, L.2
Wang, X.3
Sun, F.4
Wang, C.C.5
-
13
-
-
0034697984
-
The structure of reduced tryparedoxin peroxidase reveals a decamer and insight into reactivity of 2Cys-peroxiredoxins
-
M.S. Alphey, C.S. Bond, E. Tetaud, A.H. Fairlamb, and W.N. Hunter The structure of reduced tryparedoxin peroxidase reveals a decamer and insight into reactivity of 2Cys-peroxiredoxins J. Mol. Biol. 300 2000 903 916
-
(2000)
J. Mol. Biol.
, vol.300
, pp. 903-916
-
-
Alphey, M.S.1
Bond, C.S.2
Tetaud, E.3
Fairlamb, A.H.4
Hunter, W.N.5
-
14
-
-
0343953384
-
Crystal structure of decameric 2-Cys peroxiredoxin from human erythrocytes at 1.7 Å resolution
-
E. Schröder, J.A. Littlechild, A.A. Lebedev, N. Errington, A.A. Vagin, and M.N. Isupov Crystal structure of decameric 2-Cys peroxiredoxin from human erythrocytes at 1.7 Å resolution Structure 8 2000 605 615
-
(2000)
Structure
, vol.8
, pp. 605-615
-
-
Schröder, E.1
Littlechild, J.A.2
Lebedev, A.A.3
Errington, N.4
Vagin, A.A.5
Isupov, M.N.6
-
15
-
-
9744232974
-
Bacterial defenses against oxidants: Mechanistic features of cysteine-based peroxidases and their flavoprotein reductases
-
L.B. Poole Bacterial defenses against oxidants: mechanistic features of cysteine-based peroxidases and their flavoprotein reductases Arch. Biochem. Biophys. 433 2005 240 254
-
(2005)
Arch. Biochem. Biophys.
, vol.433
, pp. 240-254
-
-
Poole, L.B.1
-
16
-
-
40749096524
-
ATP-dependent modulation and autophosphorylation of rapeseed 2-Cys peroxiredoxin
-
M. Aran, D. Caporaletti, A.M. Senn, M.T. Tellez de Iñon, M.R. Girotti, A.S. Llera, and R.A. Wolosiuk ATP-dependent modulation and autophosphorylation of rapeseed 2-Cys peroxiredoxin FEBS J. 275 2008 1450 1463
-
(2008)
FEBS J.
, vol.275
, pp. 1450-1463
-
-
Aran, M.1
Caporaletti, D.2
Senn, A.M.3
Tellez De Iñon, M.T.4
Girotti, M.R.5
Llera, A.S.6
Wolosiuk, R.A.7
-
17
-
-
0037117488
-
The plant-specific function of 2-Cys peroxiredoxin-mediated detoxification of peroxides in the redox-hierarchy of photosynthetic electron flux
-
J. König, M. Baier, F. Horling, U. Kahmann, G. Harris, P. Schürmann, and K.-J. Dietz The plant-specific function of 2-Cys peroxiredoxin-mediated detoxification of peroxides in the redox-hierarchy of photosynthetic electron flux Proc. Natl. Acad. Sci. 99 2002 5738 5743
-
(2002)
Proc. Natl. Acad. Sci.
, vol.99
, pp. 5738-5743
-
-
König, J.1
Baier, M.2
Horling, F.3
Kahmann, U.4
Harris, G.5
Schürmann, P.6
Dietz, K.-J.7
-
18
-
-
0032817414
-
Stimulation of peroxidase activity by decamerization related to ionic strength: AhpC protein from Amphibacillus xylanus
-
K. Kitano, Y. Niimura, Y. Nishiyama, and K. Miki Stimulation of peroxidase activity by decamerization related to ionic strength: AhpC protein from Amphibacillus xylanus J. Biochem. 126 1999 313 319
-
(1999)
J. Biochem.
, vol.126
, pp. 313-319
-
-
Kitano, K.1
Niimura, Y.2
Nishiyama, Y.3
Miki, K.4
-
19
-
-
0036430416
-
Expression, purification, and characterization of subunit E, an essential subunit of the vacuolar ATPase
-
G. Grüber, J. Godovac-Zimmermann, T.A. Link, Ü. Coskun, V.F. Rizzo, C. Betz, and S.M. Bailer Expression, purification, and characterization of subunit E, an essential subunit of the vacuolar ATPase Biochem. Biophys. Res. Commun. 298 2002 383 391
-
(2002)
Biochem. Biophys. Res. Commun.
, vol.298
, pp. 383-391
-
-
Grüber, G.1
Godovac-Zimmermann, J.2
Link, T.A.3
Coskun Ü.4
Rizzo, V.F.5
Betz, C.6
Bailer, S.M.7
-
20
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
U.K. Laemmli Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227 1970 680 685
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
21
-
-
33845332754
-
EMAN2: An extensible image processing suite for electron microscopy
-
G. Tang, L. Peng, P.R. Baldwin, D.S. Mann, W. Jiang, I. Rees, and S.J. Ludtke EMAN2: an extensible image processing suite for electron microscopy J. Struct. Biol. 157 2007 38 46
-
(2007)
J. Struct. Biol.
, vol.157
, pp. 38-46
-
-
Tang, G.1
Peng, L.2
Baldwin, P.R.3
Mann, D.S.4
Jiang, W.5
Rees, I.6
Ludtke, S.J.7
-
22
-
-
34548643898
-
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a multi-path simulated annealing optimization algorithm
-
X. Liu, W. Jiang, J. Jakana, and W. Chiu Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a multi-path simulated annealing optimization algorithm J. Struct. Biol. 160 2007 11 27
-
(2007)
J. Struct. Biol.
, vol.160
, pp. 11-27
-
-
Liu, X.1
Jiang, W.2
Jakana, J.3
Chiu, W.4
-
23
-
-
4444221565
-
UCSF chimera - A visualization system for exploratory research and analysis
-
E.F. Pettersen, T.D. Goddard, C.C. Huang, G.S. Couch, D.M. Greenblatt, E.C. Meng, and T.E. Ferrin UCSF chimera - a visualization system for exploratory research and analysis J. Comput. Chem. 25 2004 1605 1612
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
24
-
-
0026206788
-
Sparse matrix sampling: A screening method for crystallization of proteins
-
J. Jancarik, and S.-H. Kim Sparse matrix sampling: a screening method for crystallization of proteins J. Appl. Crystallogr. 24 1991 409 411
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 409-411
-
-
Jancarik, J.1
Kim, S.-H.2
-
25
-
-
79953759821
-
IMOSFLM: A new graphical interface for diffraction-image processing with MOSFLM
-
T.G. Battye, L. Kontogiannis, O. Johnson, H.R. Powell, and A.G. Leslie iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM Acta Crystallogr. D Biol. Crystallogr. 67 2011 271 281
-
(2011)
Acta Crystallogr. D Biol. Crystallogr.
, vol.67
, pp. 271-281
-
-
Battye, T.G.1
Kontogiannis, L.2
Johnson, O.3
Powell, H.R.4
Leslie, A.G.5
-
26
-
-
34447508216
-
Phaser crystallographic software
-
A.J. McCoy, R.W. Grosse-Kunstleve, P.D. Adams, M.D. Winn, L.C. Storoni, and R.J. Read Phaser crystallographic software J. Appl. Crystallogr. 40 2007 658 674
-
(2007)
J. Appl. Crystallogr.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
29
-
-
13444307044
-
Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
-
E. Krissinel, and K. Henrick Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions Acta Crystallogr. D Biol. Crystallogr. 60 2004 2256 2268
-
(2004)
Acta Crystallogr. D Biol. Crystallogr.
, vol.60
, pp. 2256-2268
-
-
Krissinel, E.1
Henrick, K.2
-
30
-
-
33947368167
-
Cloning, purification, and nucleotide-binding traits of the catalytic subunit A of the V1VO ATPase from Aedes albopictus
-
C. Hunke, W.J. Chen, H.J. Schafer, and G. Grüber Cloning, purification, and nucleotide-binding traits of the catalytic subunit A of the V1VO ATPase from Aedes albopictus Protein Expr. Purif. 53 2007 378 383
-
(2007)
Protein Expr. Purif.
, vol.53
, pp. 378-383
-
-
Hunke, C.1
Chen, W.J.2
Schafer, H.J.3
Grüber, G.4
-
31
-
-
46849118983
-
Thermodynamics of the dimer-decamer transition of reduced human and plant 2-cys peroxiredoxin
-
S. Barranco-Medina, S. Kakorin, J.J. Lazaro, and K.J. Dietz Thermodynamics of the dimer-decamer transition of reduced human and plant 2-cys peroxiredoxin Biochemistry 47 2008 7196 7204
-
(2008)
Biochemistry
, vol.47
, pp. 7196-7204
-
-
Barranco-Medina, S.1
Kakorin, S.2
Lazaro, J.J.3
Dietz, K.J.4
-
32
-
-
84882343901
-
The conformational bases for the two functionalities of 2-cysteine peroxiredoxins as peroxidase and chaperone
-
J. König, H. Galliardt, P. Jutte, S. Schaper, L. Dittmann, and K.J. Dietz The conformational bases for the two functionalities of 2-cysteine peroxiredoxins as peroxidase and chaperone J. Exp. Bot. 64 2013 3483 3497
-
(2013)
J. Exp. Bot.
, vol.64
, pp. 3483-3497
-
-
König, J.1
Galliardt, H.2
Jutte, P.3
Schaper, S.4
Dittmann, L.5
Dietz, K.J.6
-
33
-
-
0040187666
-
The AhpC and AhpD antioxidant defense system of Mycobacterium tuberculosis
-
P.J. Hillas, F.S. del Alba, J. Oyarzabal, A. Wilks, and P.R. Ortiz De Montellano The AhpC and AhpD antioxidant defense system of Mycobacterium tuberculosis J. Biol. Chem. 275 2000 18801 18809
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 18801-18809
-
-
Hillas, P.J.1
Del Alba, F.S.2
Oyarzabal, J.3
Wilks, A.4
Ortiz De Montellano, P.R.5
|