Automated single cell sorting and deposition in submicroliter drops

Applied Physics Letters

Volumn 105, Issue 8, 2014, Pages

  Salánki, Rita ^a,b,c   Gerecsei, Tamás ^c   Orgovan, Norbert ^b,c   Sándor, Noémi ^d   Péter, Beatrix ^a,b   Bajtay, Zsuzsa ^c   Erdei, Anna ^c,d   Horvath, Robert ^b   Szabó, Bálint ^b,c,e  

^a UNIVERSITY OF PANNONIA   (Hungary)

^b RESEARCH INSTITUTE FOR TECHNICAL PHYSICS AND MATERIALS SCIENCE   (Hungary)

^c EÖTVÖS LORÁND UNIVERSITY   (Hungary)

^d MTA ELTE Immunology Research Group Eötvös University   (Hungary)

^e CellSorter Company for Innovations   (Hungary)

Author keywords

[No Author keywords available]

Indexed keywords

BODY FLUIDS; CYTOLOGY; DNA SEQUENCES; DROPS; LAPLACE TRANSFORMS; POLYMERASE CHAIN REACTION; STEM CELLS;

ADHESION FORCES; CRITICAL PRESSURES; DNA SEQUENCING; FLUIDIC VALVES; LAPLACE PRESSURE; MICRO-PIPETTE; MULTIPLE CELLS; PRECISE CONTROL;

MOLECULAR BIOLOGY;

EID: 84907301249     PISSN: 00036951     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.4893922     Document Type: Article

References (32)

1. V. Lecault, A. K. White, A. Singhal, and C. L. Hansen, Curr. Opin. Chem. Biol. 16, 381 (2012). 10.1016/j.cbpa.2012.03.022
2. A. Ståhlberg, C. Thomsen, D. Ruff, and P. Åman, Am. Assoc. Clin. Chem. 58, 1682 (2012). 10.1373/clinchem.2012.191445
3. A. Raj, C. S. Peskin, D. Tranchina, D. Y. Vargas, and S. Tyagi, PLoS Biol. 4, e309 (2006). 10.1371/journal.pbio.0040309 (Pubitemid 44610091)
4. H. H. Chang, M. Hemberg, M. Barahona, D. E. Ingber, and S. Huang, Nature 453, 544 (2008). 10.1038/nature06965 (Pubitemid 351733323)
5. T. Kalisky, P. Blainey, and S. R. Quake, Annu. Rev. Genet. 45, 431 (2011). 10.1146/annurev-genet-102209-163607
6. K. Hope and M. Bhatia, Nat. Methods 8, S36 (2011). 10.1038/nmeth.1590
7. N. Navin and J. Hicks, Genome Med. 3, 31 (2011). 10.1101/gr.099622.109
8. D. Ramsköld, S. Luo, Y. C. Wang, R. Li, O. Deng, O. Faridani, G. A. Daniels, I. Khrebtukova, J. F. Loring, L. C. Laurent, G. P. Schroth, and R. Sandberg, Nat Biotechnol. 30, 777 (2012). 10.1038/nbt.2282
9. A. K. Shalek, R. Satija, X. Adiconis, R. S. Gertner, J. T. Gaublomme, R. Raychowdhury, S. Schwartz, N. Yosef, C. Malboeuf, D. Lu, J. T. Trombetta, D. Gennert, A. Gnirke, A. Goren, N. Hacohen, J. Z. Levin, H. Park, and A. Regev, Nature 498, 236 (2013). 10.1038/nature12172
10. F. Kamme, R. Salunga, J. Yu, D. T. Tra, J. Zhu, L. Luo, A. Bittner, H. Q. Guo, N. Miller, J. Wan, and M. Erlander, J. Neurosci. 23, 3607 (2003).
11. A. Ståhlberg, D. Andersson, J. Aurelius, M. Faiz, M. Pekna, M. Kubista, and M. Pekny, Nucleic Acids Res. 39, e24 (2011). 10.1093/nar/gkq1182
12. L. Warren, D. Bryder, I. L. Weissman, and S. R. Quake, Proc. Natl. Acad. Sci. U. S. A. 103, 17807 (2006). 10.1073/pnas.0608512103 (Pubitemid 44852241)
13. S. S. Rubakhi and J. V. Sweedler, Nature Protoc. 2, 1987 (2007). 10.1038/nprot.2007.277 (Pubitemid 47308137)
14. A. Bora, S. P. Annangudi, L. J. Mille, S. S. Rubakhin, J. Forbes, N. L. Kelleher, M. U. Gillette, and J. V. Sweedler, J. Proteome Res. 7, 4992 (2008). 10.1021/pr800394e
15. S. S. Rubakhi, E. V. Romanova, P. Nemes, and J. V. Sweedler, Nat. Methods 8, S20 (2011). 10.1038/nmeth.1549
16. F. Tang, C. Barbacioru, Y. Wang, E. Nordman, C. Lee, N. Xu, X. Wang, J. Bodeau, B. B. Tuch, A. Siddiqui, K. Lao, and M. A. Surani, Nat. Methods 6, 377 (2009). 10.1038/nmeth.1315
17. K. Kurimoto, Y. Yabuta, Y. Ohinata, Y. Ono, K. D. Uno, R. G. Yamada, H. R. Ueda, and M. Saitou, Nucleic Acids Res. 34, e42 (2006). 10.1093/nar/gkl050
18. F. Tang, K. Lao, and M. A. Surani, Nat. Methods 8, S6 (2011). 10.1038/nmeth.1557
19. C. M. Hempel, K. Sugino, and S. B. Nelson, Nature Protocols 2, 2924 (2007). 10.1038/nprot.2007.416
20. J. S. Jang, V. A. Simon, R. M. Feddersen, F. Rakhshan, D. A. Schultz, M. A. Zschunke, W. L. Lingle, C. P. Kolbert, and J. Jen, BMC Genomics 12, 144 (2011). 10.1038/nature02871
21. J. Melin and S. R. Quake, Annu. Rev. Biophys. Biomol. Struct. 36, 213 (2007). 10.1146/annurev.biophys.36.040306.132646 (Pubitemid 46998117)
22. M. Hosokawa, A. Arakaki, M. Takahashi, T. Mori, H. Takeyama, and T. Matsunaga, Anal. Chem. 81, 5308 (2009). 10.1021/ac900535h
23. A. Schneider, D. Spitkovsky, P. Riess, M. Molcanyi, N. Kamisetti, M. Maegele, J. Hescheler, and U. Schaefer, PLoS ONE 3, e3788 (2008). 10.1371/journal.pone.0003788
24. Z. Környei, S. Beke, T. Mihálffy, M. Jelitai, K. J. Kovács, Z. Szabó, and B. Szabó, Sci. Rep. 3, 1088 (2013). 10.1038/srep01088
25. N. Yoshimoto, A. Kida, X. Jie, M. Kurokawa, M. Iijima, T. Niimi, A. D. Maturana, I. Nikaido, H. R. Ueda, K. Tatematsu, K. Tanizawa, A. Kondo, I. Fujii, and S. Kuroda, Sci. Rep. 3, 1191 (2013) 10.1038/srep01191.
26. See supplementary material at http://dx.doi.org/10.1063/1.4893922 E-APPLAB-105-106434 for a detailed description of experimental methods; table of deposited drop volumes; and a review of possible physical effects in the background of the anomalous pressure we observed.
27. R. C. Tolman, J. Chem. Phys. 17, 333 (1949). 10.1063/1.1747247
28. G. Ramon and A. Oron, J. Colloid Interface Sci. 327, 145 (2008). 10.1016/j.jcis.2008.08.016
29. J. L. Pérez-Díaz, M. A. Álvarez-Valenzuela, and J. C. García-Prada, J. Colloid Interface Sci. 381, 180 (2012). 10.1016/j.jcis.2012.05.034
30. N. Orgovan, B. Peter, S. Bosze, J. J. Ramsden, B. Szabó, and R. Horvath, Sci. Rep. 4, 4034 (2014). 10.1038/srep04034
31. S. Faraasen, J. Vörös, G. Csúcs, M. Textor, H. P. Merkle, and E. Walter, Pharm. Res. 20, 237 (2003). 10.1023/A:1022366921298 (Pubitemid 36269730)
32. R. Salánki, C. Hos, N. Orgovan, B. Péter, N. Sándor, Z. Bajtay, A. Erdei, R. Horvath, and B. Szabó, " Single cell adhesion assay using computer controlled micropipette," PLoS ONE (to be published).