-
1
-
-
84874743697
-
Spatial mapping of extracellular oxidant production by a white rot basidiomycete on wood reveals details of ligninolytic mechanism
-
Hunt CG, Houtman CJ, Jones DC, Kitin P, Korripally P, Hammel KE. 2013. Spatial mapping of extracellular oxidant production by a white rot basidiomycete on wood reveals details of ligninolytic mechanism. Environ. Microbiol. 15:956-966. http://dx.doi.org/10.1111/1462-2920.12039.
-
(2013)
Environ. Microbiol.
, vol.15
, pp. 956-966
-
-
Hunt, C.G.1
Houtman, C.J.2
Jones, D.C.3
Kitin, P.4
Korripally, P.5
Hammel, K.E.6
-
2
-
-
77950203343
-
Laccase and its role in production of extracellular reactive oxygen species during wood decay by the brown rot basidiomycete Postia placenta
-
Wei DS, Houtman CJ, Kapich AN, Hunt CG, Cullen D, Hammel KE. 2010. Laccase and its role in production of extracellular reactive oxygen species during wood decay by the brown rot basidiomycete Postia placenta. Appl. Environ. Microbiol. 76:2091-2097. http://dx.doi.org/10.1128/AEM.02929-09.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 2091-2097
-
-
Wei, D.S.1
Houtman, C.J.2
Kapich, A.N.3
Hunt, C.G.4
Cullen, D.5
Hammel, K.E.6
-
3
-
-
0242573404
-
Reactive oxygen species and induction of lignin peroxidase in Phanerochaete chrysosporium
-
Belinky PA, Flikshtein N, Lechenko S, Gepstein S, Dosoretz CG. 2003. Reactive oxygen species and induction of lignin peroxidase in Phanerochaete chrysosporium. Appl. Environ. Microbiol. 69:6500-6506. http://dx.doi.org/10.1128/AEM.69.11.6500-6506.2003.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 6500-6506
-
-
Belinky, P.A.1
Flikshtein, N.2
Lechenko, S.3
Gepstein, S.4
Dosoretz, C.G.5
-
4
-
-
84863830769
-
Effect of walnut heartwood extractives, acid copper chromate, and boric acid on white-rot decay resistance of treated beech sapwood
-
Feraydoni V, Hosseinihashemi SK. 2012. Effect of walnut heartwood extractives, acid copper chromate, and boric acid on white-rot decay resistance of treated beech sapwood. Bioresources 7:2393-2402.
-
(2012)
Bioresources
, vol.7
, pp. 2393-2402
-
-
Feraydoni, V.1
Hosseinihashemi, S.K.2
-
5
-
-
84867739175
-
Evaluation of fungi toxic activity of tannins and a tannin-copper complex from the mesocarp of Cocos nucifera Linn
-
Ramirez MGL, Ruiz HGO, Arzate FN, Gallegos MAC, Enriquez SG. 2012. Evaluation of fungi toxic activity of tannins and a tannin-copper complex from the mesocarp of Cocos nucifera Linn. Wood Fiber Sci. 44: 357-364.
-
(2012)
Wood Fiber Sci.
, vol.44
, pp. 357-364
-
-
Ramirez, M.G.L.1
Ruiz, H.G.O.2
Arzate, F.N.3
Gallegos, M.A.C.4
Enriquez, S.G.5
-
6
-
-
84863721257
-
Antifungal activity of liriodenine from Michelia formosana heartwood against wood-rotting fungi
-
Wu CC, Wu CL, Huang SL, Chang HT. 2012. Antifungal activity of liriodenine from Michelia formosana heartwood against wood-rotting fungi. Wood Sci. Technol. 46:737-747. http://dx.doi.org/10.1007/s00226-011-0428-9.
-
(2012)
Wood Sci. Technol.
, vol.46
, pp. 737-747
-
-
Wu, C.C.1
Wu, C.L.2
Huang, S.L.3
Chang, H.T.4
-
7
-
-
0034647451
-
Elimination and detoxification of softwood extractives by white-rot fungi
-
Dorado J, Claassen FW, van Beek TA, Lenon G, Wijnberg JB, Sierra-Alvarez R. 2000. Elimination and detoxification of softwood extractives by white-rot fungi. J. Biotechnol. 80:231-240. http://dx.doi.org/10.1016/S0168-1656(00)00264-9.
-
(2000)
J. Biotechnol.
, vol.80
, pp. 231-240
-
-
Dorado, J.1
Claassen, F.W.2
van Beek, T.A.3
Lenon, G.4
Wijnberg, J.B.5
Sierra-Alvarez, R.6
-
8
-
-
84867027657
-
P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium
-
Syed K, Yadav JS. 2012. P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium. Crit. Rev. Microbiol. 38: 339-363. http://dx.doi.org/10.3109/1040841X.2012.682050.
-
(2012)
Crit. Rev. Microbiol.
, vol.38
, pp. 339-363
-
-
Syed, K.1
Yadav, J.S.2
-
9
-
-
79953163565
-
Insight into functional diversity of cytochrome P450 in the whiterot basidiomycete Phanerochaete chrysosporium: involvement of versatile monooxygenase
-
Hirosue S, Tazaki M, Hiratsuka N, Yanai S, Kabumoto H, Shinkyo R, Arisawa A, Sakaki T, Tsunekawa H, Johdo O, Ichinose H, Wariishi H. 2011. Insight into functional diversity of cytochrome P450 in the whiterot basidiomycete Phanerochaete chrysosporium: involvement of versatile monooxygenase. Biochem. Biophys. Res. Commun. 407:118-123. http://dx.doi.org/10.1016/j.bbrc.2011.02.121.
-
(2011)
Biochem. Biophys. Res. Commun.
, vol.407
, pp. 118-123
-
-
Hirosue, S.1
Tazaki, M.2
Hiratsuka, N.3
Yanai, S.4
Kabumoto, H.5
Shinkyo, R.6
Arisawa, A.7
Sakaki, T.8
Tsunekawa, H.9
Johdo, O.10
Ichinose, H.11
Wariishi, H.12
-
10
-
-
25444445534
-
Genome-wide structural and evolutionary analysis of the P450 monooxygenase genes (P450ome) in the white rot fungus Phanerochaete chrysosporium: evidence for gene duplications and extensive gene clustering
-
Doddapaneni H, Chakraborty R, Yadav JS. 2005. Genome-wide structural and evolutionary analysis of the P450 monooxygenase genes (P450ome) in the white rot fungus Phanerochaete chrysosporium: evidence for gene duplications and extensive gene clustering. BMC Genomics 6:92. http://dx.doi.org/10.1186/1471-2164-6-92.
-
(2005)
BMC Genomics
, vol.6
, pp. 92
-
-
Doddapaneni, H.1
Chakraborty, R.2
Yadav, J.S.3
-
11
-
-
84876402917
-
Xenomic networks variability and adaptation traits in wood decaying fungi
-
Morel M, Meux E, Mathieu Y, Thuillier A, Chibani K, Harvengt L, Jacquot JP, Gelhaye E. 2013. Xenomic networks variability and adaptation traits in wood decaying fungi. Microb. Biotechnol. 6:248-263. http://dx.doi.org/10.1111/1751-7915.12015.
-
(2013)
Microb. Biotechnol.
, vol.6
, pp. 248-263
-
-
Morel, M.1
Meux, E.2
Mathieu, Y.3
Thuillier, A.4
Chibani, K.5
Harvengt, L.6
Jacquot, J.P.7
Gelhaye, E.8
-
12
-
-
84865540130
-
Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
-
Suzuki H, MacDonald J, Syed K, Salamov A, Hori C, Aerts A, Henrissat B, Wiebenga A, Vankuyk PA, Barry K, Lindquist E, LaButti K, Lapidus A, Lucas S, Coutinho P, Gong YC, Samejima M, Mahadevan R, Abou-Zaid M, de Vries RP, Igarashi K, Yadav JS, Grigoriev IV, Master ER. 2012. Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. BMC Genomics 13:444. http://dx.doi.org/10.1186/1471-2164-13-444.
-
(2012)
BMC Genomics
, vol.13
, pp. 444
-
-
Suzuki, H.1
MacDonald, J.2
Syed, K.3
Salamov, A.4
Hori, C.5
Aerts, A.6
Henrissat, B.7
Wiebenga, A.8
Vankuyk, P.A.9
Barry, K.10
Lindquist, E.11
LaButti, K.12
Lapidus, A.13
Lucas, S.14
Coutinho, P.15
Gong, Y.C.16
Samejima, M.17
Mahadevan, R.18
Abou-Zaid, M.19
de Vries, R.P.20
Igarashi, K.21
Yadav, J.S.22
Grigoriev, I.V.23
Master, E.R.24
more..
-
13
-
-
84899496510
-
Systematic identification and evolutionary analysis of catalytically versatile cytochrome P450 monooxygenase families enriched in model basidiomycete fungi
-
Syed K, Shale K, Pagadala NS, Tuszynski J. 2014. Systematic identification and evolutionary analysis of catalytically versatile cytochrome P450 monooxygenase families enriched in model basidiomycete fungi. PLoS One 9:e86683. http://dx.doi.org/10.1371/journal.pone.0086683.
-
(2014)
PLoS One
, vol.9
, pp. e86683
-
-
Syed, K.1
Shale, K.2
Pagadala, N.S.3
Tuszynski, J.4
-
14
-
-
84894276050
-
Diversification of fungal specific class A glutathione transferases in saprotrophic fungi
-
Mathieu Y, Prosper P, Favier F, Harvengt L, Didierjean C, Jacquot JP, Morel-Rouhier M, Gelhaye E. 2013. Diversification of fungal specific class A glutathione transferases in saprotrophic fungi. PLoS One 8:e80298. http://dx.doi.org/10.1371/journal.pone.0080298.
-
(2013)
PLoS One
, vol.8
, pp. e80298
-
-
Mathieu, Y.1
Prosper, P.2
Favier, F.3
Harvengt, L.4
Didierjean, C.5
Jacquot, J.P.6
Morel-Rouhier, M.7
Gelhaye, E.8
-
15
-
-
0038266122
-
Role of yeast glutaredoxins as glutathione S-transferases
-
Collinson EJ, Grant CM. 2003. Role of yeast glutaredoxins as glutathione S-transferases. J. Biol. Chem. 278:22492-22497. http://dx.doi.org/10.1074/jbc. M301387200.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 22492-22497
-
-
Collinson, E.J.1
Grant, C.M.2
-
16
-
-
33748347924
-
Saccharomyces cerevisiae cells have three omega class glutathione S-transferases acting as 1-Cys thiol transferases
-
Garcera A, Barreto L, Piedrafita L, Tamarit J, Herrero E. 2006. Saccharomyces cerevisiae cells have three omega class glutathione S-transferases acting as 1-Cys thiol transferases. Biochem. J. 398:187-196. http://dx.doi.org/10.1042/BJ20060034.
-
(2006)
Biochem. J.
, vol.398
, pp. 187-196
-
-
Garcera, A.1
Barreto, L.2
Piedrafita, L.3
Tamarit, J.4
Herrero, E.5
-
17
-
-
73849112021
-
Structures of yeast glutathione-S-transferase GTT2 reveal a new catalytic type of GST family
-
Ma XX, Jiang YL, He YX, Bao R, Chen YX, Zhou CZ. 2009. Structures of yeast glutathione-S-transferase GTT2 reveal a new catalytic type of GST family. EMBO Rep. 10:1320-1326. http://dx.doi.org/10.1038/embor.2009.216.
-
(2009)
EMBO Rep.
, vol.10
, pp. 1320-1326
-
-
Ma, X.X.1
Jiang, Y.L.2
He, Y.X.3
Bao, R.4
Chen, Y.X.5
Zhou, C.Z.6
-
18
-
-
70849084546
-
The fungal glutathione S-transferase system. Evidence of new classes in the wooddegrading basidiomycete Phanerochaete chrysosporium
-
Morel M, Ngadin AA, Droux M, Jacquot JP, Gelhaye E. 2009. The fungal glutathione S-transferase system. Evidence of new classes in the wooddegrading basidiomycete Phanerochaete chrysosporium. Cell. Mol. Life Sci. 66:3711-3725. http://dx.doi.org/10.1007/s00018-009-0104-5.
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, pp. 3711-3725
-
-
Morel, M.1
Ngadin, A.A.2
Droux, M.3
Jacquot, J.P.4
Gelhaye, E.5
-
19
-
-
69749084914
-
Lignin peroxidase of Phanerochaete chrysosporium
-
Tien M, Kirk TK. 1988. Lignin peroxidase of Phanerochaete chrysosporium. Methods Enzymol. 161:238-249. http://dx.doi.org/10.1016/0076-6879(88)61025-1.
-
(1988)
Methods Enzymol.
, vol.161
, pp. 238-249
-
-
Tien, M.1
Kirk, T.K.2
-
20
-
-
0034948896
-
A Bayesian framework for the analysis of microarray expression data: regularized t-test and statistical inferences of gene changes
-
Baldi P, Long AD. 2001. A Bayesian framework for the analysis of microarray expression data: regularized t-test and statistical inferences of gene changes. Bioinformatics 17:509-519. http://dx.doi.org/10.1093/bioinformatics/17.6.509.
-
(2001)
Bioinformatics
, vol.17
, pp. 509-519
-
-
Baldi, P.1
Long, A.D.2
-
21
-
-
0028831760
-
Improved high-level expression system for eukaryotic genes in Escherichia coli using T7 RNA polymerase and rare ArgtRNAs
-
Schenk PM, Baumann S, Mattes R, Steinbiss HH. 1995. Improved high-level expression system for eukaryotic genes in Escherichia coli using T7 RNA polymerase and rare ArgtRNAs. Biotechniques 19:196-200.
-
(1995)
Biotechniques
, vol.19
, pp. 196-200
-
-
Schenk, P.M.1
Baumann, S.2
Mattes, R.3
Steinbiss, H.H.4
-
22
-
-
66149086143
-
Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site
-
Couturier J, Koh CS, Zaffagnini M, Winger AM, Gualberto JM, Corbier C, Decottignies P, Jacquot JP, Lemaire SD, Didierjean C, Rouhier N. 2009. Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site. J. Biol. Chem. 284:9299-9310. http://dx.doi.org/10.1074/jbc. M807998200.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 9299-9310
-
-
Couturier, J.1
Koh, C.S.2
Zaffagnini, M.3
Winger, A.M.4
Gualberto, J.M.5
Corbier, C.6
Decottignies, P.7
Jacquot, J.P.8
Lemaire, S.D.9
Didierjean, C.10
Rouhier, N.11
-
23
-
-
0021950853
-
4-Hydroxyalk-2-enals are substrates for glutathione transferase
-
Alin P, Danielson UH, Mannervik B. 1985. 4-Hydroxyalk-2-enals are substrates for glutathione transferase. FEBS Lett. 179:267-270. http://dx.doi.org/10.1016/0014-5793(85)80532-9.
-
(1985)
FEBS Lett.
, vol.179
, pp. 267-270
-
-
Alin, P.1
Danielson, U.H.2
Mannervik, B.3
-
24
-
-
33750380347
-
A peroxisomal glutathione transferase of Saccharomyces cerevisiae is functionally related to sulfur amino acid metabolism
-
Barreto L, Garcera A, Jansson K, Sunnerhagen P, Herrero E. 2006. A peroxisomal glutathione transferase of Saccharomyces cerevisiae is functionally related to sulfur amino acid metabolism. Eukaryot. Cell 5:1748-1759. http://dx.doi.org/10.1128/EC.00216-06.
-
(2006)
Eukaryot. Cell
, vol.5
, pp. 1748-1759
-
-
Barreto, L.1
Garcera, A.2
Jansson, K.3
Sunnerhagen, P.4
Herrero, E.5
-
25
-
-
0036275447
-
Getting started with yeast
-
Sherman F. 2002. Getting started with yeast. Methods Enzymol. 350:3-41. http://dx.doi.org/10.1016/S0076-6879(02)50954-X.
-
(2002)
Methods Enzymol.
, vol.350
, pp. 3-41
-
-
Sherman, F.1
-
26
-
-
84883559039
-
In situ antioxidant and antimicrobial activities of naturally occurring caffeic acid, p-coumaric acid and rutin, using food systems
-
Stojkovic D, Petrovic J, Sokovic M, Glamoclija J, Kukic-Markovic J, Petrovic S. 2013. In situ antioxidant and antimicrobial activities of naturally occurring caffeic acid, p-coumaric acid and rutin, using food systems. J. Sci. Food Agric. 93:3205-3208. http://dx.doi.org/10.1002/jsfa.6156.
-
(2013)
J. Sci. Food Agric.
, vol.93
, pp. 3205-3208
-
-
Stojkovic, D.1
Petrovic, J.2
Sokovic, M.3
Glamoclija, J.4
Kukic-Markovic, J.5
Petrovic, S.6
-
27
-
-
0002629078
-
Toxicity of tannic compounds to microorganisms
-
Hemingway RW, Laks PE (ed). Plenum Press, New York, NY
-
Field FA, Lettinga J. 1992. Toxicity of tannic compounds to microorganisms, p 673-692. In Hemingway RW, Laks PE (ed), Plant polyphenols: synthesis, properties, significance. Basic life sciences, vol. 59. Plenum Press, New York, NY.
-
(1992)
Plant polyphenols: synthesis, properties, significance. Basic life sciences.
, vol.59
, pp. 673-692
-
-
Field, F.A.1
Lettinga, J.2
-
28
-
-
0036073857
-
Interaction of plant polyphenols with salivary proteins
-
Bennick A. 2002. Interaction of plant polyphenols with salivary proteins. Crit. Rev. Oral Biol. Med. 13:184-196. http://dx.doi.org/10.1177/154411130201300208.
-
(2002)
Crit. Rev. Oral Biol. Med.
, vol.13
, pp. 184-196
-
-
Bennick, A.1
-
29
-
-
84886743737
-
Evolutionary analysis of hydrophobin gene family in two wooddegrading basidiomycetes, Phlebia brevispora and Heterobasidion annosum s.l
-
Mgbeahuruike AC, Kovalchuk A, Chen H, Ubhayasekera W, Asiegbu FO. 2013. Evolutionary analysis of hydrophobin gene family in two wooddegrading basidiomycetes, Phlebia brevispora and Heterobasidion annosum s.l. BMC Evol. Biol. 13:240. http://dx.doi.org/10.1186/1471-2148-13-240.
-
(2013)
BMC Evol. Biol.
, vol.13
, pp. 240
-
-
Mgbeahuruike, A.C.1
Kovalchuk, A.2
Chen, H.3
Ubhayasekera, W.4
Asiegbu, F.O.5
-
30
-
-
84892411290
-
Comparative genomics and evolutionary analysis of hydrophobins from three species of wood-degrading fungi
-
Mgbeahuruike AC, Kovalchuk A, Asiegbu FO. 2013. Comparative genomics and evolutionary analysis of hydrophobins from three species of wood-degrading fungi. Mycologia 105:1471-1478. http://dx.doi.org/10.3852/13-077.
-
(2013)
Mycologia
, vol.105
, pp. 1471-1478
-
-
Mgbeahuruike, A.C.1
Kovalchuk, A.2
Asiegbu, F.O.3
-
31
-
-
84863115537
-
A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust)
-
Hacquard S, Joly DL, Lin YC, Tisserant E, Feau N, Delaruelle C, Legue V, Kohler A, Tanguay P, Petre B, Frey P, Van de Peer Y, Rouze P, Martin F, Hamelin RC, Duplessis S. 2012. A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust). Mol. Plant Microbe Interact. 25:279-293. http://dx.doi.org/10.1094/MPMI-09-11-0238.
-
(2012)
Mol. Plant Microbe Interact.
, vol.25
, pp. 279-293
-
-
Hacquard, S.1
Joly, D.L.2
Lin, Y.C.3
Tisserant, E.4
Feau, N.5
Delaruelle, C.6
Legue, V.7
Kohler, A.8
Tanguay, P.9
Petre, B.10
Frey, P.11
Van de Peer, Y.12
Rouze, P.13
Martin, F.14
Hamelin, R.C.15
Duplessis, S.16
-
32
-
-
79960732184
-
A secreted effector protein of Laccaria bicolor is required for symbiosis development
-
Plett JM, Kemppainen M, Kale SD, Kohler A, Legue V, Brun A, Tyler BM, Pardo AG, Martin F. 2011. A secreted effector protein of Laccaria bicolor is required for symbiosis development. Curr. Biol. 21:1197-1203. http://dx.doi.org/10.1016/j.cub.2011.05.033.
-
(2011)
Curr. Biol.
, vol.21
, pp. 1197-1203
-
-
Plett, J.M.1
Kemppainen, M.2
Kale, S.D.3
Kohler, A.4
Legue, V.5
Brun, A.6
Tyler, B.M.7
Pardo, A.G.8
Martin, F.9
-
33
-
-
79851510209
-
Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar
-
Petre B, Major I, Rouhier N, Duplessis S. 2011. Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar. BMC Plant Biol. 11:33. http://dx.doi.org/10.1186/1471-2229-11-33.
-
(2011)
BMC Plant Biol.
, vol.11
, pp. 33
-
-
Petre, B.1
Major, I.2
Rouhier, N.3
Duplessis, S.4
-
35
-
-
4344579413
-
Role of the yeast acetyltransferase MPR1 in oxidative stress: regulation of oxygen reactive species caused by a toxic proline catabolism intermediate
-
Nomura M, Takagi H. 2004. Role of the yeast acetyltransferase MPR1 in oxidative stress: regulation of oxygen reactive species caused by a toxic proline catabolism intermediate. Proc. Natl. Acad. Sci. U. S. A. 101: 12616-12621. http://dx.doi.org/10.1073/pnas.0403349101.
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 12616-12621
-
-
Nomura, M.1
Takagi, H.2
-
36
-
-
25444453719
-
Clarification of cinnamoyl co-enzyme A reductase catalysis in monolignol biosynthesis of aspen
-
Li L, Cheng X, Lu S, Nakatsubo T, Umezawa T, Chiang VL. 2005. Clarification of cinnamoyl co-enzyme A reductase catalysis in monolignol biosynthesis of aspen. Plant Cell Physiol. 46:1073-1082. http://dx.doi.org/10.1093/pcp/pci120.
-
(2005)
Plant Cell Physiol.
, vol.46
, pp. 1073-1082
-
-
Li, L.1
Cheng, X.2
Lu, S.3
Nakatsubo, T.4
Umezawa, T.5
Chiang, V.L.6
-
37
-
-
34248224623
-
Phanerochaete chrysosporium soluble proteome as a prelude for the analysis of heavy metal stress response
-
Ozcan S, Yildirim V, Kaya L, Albrecht D, Becher D, Hecker M, Ozcengiz G. 2007. Phanerochaete chrysosporium soluble proteome as a prelude for the analysis of heavy metal stress response. Proteomics 7:1249-1260. http://dx.doi.org/10.1002/pmic.200600526.
-
(2007)
Proteomics
, vol.7
, pp. 1249-1260
-
-
Ozcan, S.1
Yildirim, V.2
Kaya, L.3
Albrecht, D.4
Becher, D.5
Hecker, M.6
Ozcengiz, G.7
-
38
-
-
67349249841
-
The first genome-level transcriptome of the wood-degrading fungus Phanerochaete chrysosporium grown on red oak
-
Sato S, Feltus FA, Iyer P, Tien M. 2009. The first genome-level transcriptome of the wood-degrading fungus Phanerochaete chrysosporium grown on red oak. Curr. Genet. 55:273-286. http://dx.doi.org/10.1007/s00294-009-0243-0.
-
(2009)
Curr. Genet.
, vol.55
, pp. 273-286
-
-
Sato, S.1
Feltus, F.A.2
Iyer, P.3
Tien, M.4
-
39
-
-
84893949532
-
Expression pattern of cellulolytic and xylanolytic genes regulated by transcriptional factors XYR1 and CRE1 are affected by carbon source in Trichoderma reesei
-
Castro LDS, Antoniêto AC, Pedersoli WR, Silva-Rocha R, Persinoti GF, Silva RN. 2014. Expression pattern of cellulolytic and xylanolytic genes regulated by transcriptional factors XYR1 and CRE1 are affected by carbon source in Trichoderma reesei. Gene Expr. Patterns 14:88-95. http://dx.doi.org/10.1016/j.gep.2014.01.003.
-
(2014)
Gene Expr. Patterns
, vol.14
, pp. 88-95
-
-
Castro, L.D.S.1
Antoniêto, A.C.2
Pedersoli, W.R.3
Silva-Rocha, R.4
Persinoti, G.F.5
Silva, R.N.6
-
40
-
-
77956265419
-
Genome-to-function characterization of novel fungal P450 monooxygenases oxidizing polycyclic aromatic hydrocarbons (PAHs)
-
Syed K, Doddapaneni H, Subramanian V, Lam YW, Yadav JS. 2010. Genome-to-function characterization of novel fungal P450 monooxygenases oxidizing polycyclic aromatic hydrocarbons (PAHs). Biochem. Biophys. Res. Commun. 399:492-497. http://dx.doi.org/10.1016/j.bbrc.2010.07.094.
-
(2010)
Biochem. Biophys. Res. Commun.
, vol.399
, pp. 492-497
-
-
Syed, K.1
Doddapaneni, H.2
Subramanian, V.3
Lam, Y.W.4
Yadav, J.S.5
-
41
-
-
84876165352
-
Cyp63a2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes
-
Syed K, Porollo A, Lam YW, Grimmett PE, Yadav JS. 2013. Cyp63a2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes. Appl. Environ. Microbiol. 79:2692-2702. http://dx.doi.org/10.1128/AEM.03767-12.
-
(2013)
Appl. Environ. Microbiol.
, vol.79
, pp. 2692-2702
-
-
Syed, K.1
Porollo, A.2
Lam, Y.W.3
Grimmett, P.E.4
Yadav, J.S.5
-
42
-
-
69449084967
-
Role of P450 monooxygenases in the degradation of the endocrine-disrupting chemical nonylphenol by the white rot fungus Phanerochaete chrysosporium
-
Subramanian V, Yadav JS. 2009. Role of P450 monooxygenases in the degradation of the endocrine-disrupting chemical nonylphenol by the white rot fungus Phanerochaete chrysosporium. Appl. Environ. Microbiol. 75:5570-5580. http://dx.doi.org/10.1128/AEM.02942-08.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 5570-5580
-
-
Subramanian, V.1
Yadav, J.S.2
-
43
-
-
77955561065
-
Cytochrome P450 monooxygenases involved in anthracene metabolism by the white-rot basidiomycete Phanerochaete chrysosporium
-
Chigu NL, Hirosue S, Nakamura C, Teramoto H, Ichinose H, Wariishi H. 2010. Cytochrome P450 monooxygenases involved in anthracene metabolism by the white-rot basidiomycete Phanerochaete chrysosporium. Appl. Microbiol. Biotechnol. 87:1907-1916. http://dx.doi.org/10.1007/s00253-010-2616-1.
-
(2010)
Appl. Microbiol. Biotechnol.
, vol.87
, pp. 1907-1916
-
-
Chigu, N.L.1
Hirosue, S.2
Nakamura, C.3
Teramoto, H.4
Ichinose, H.5
Wariishi, H.6
-
44
-
-
20244389729
-
Bioinformatic and enzymatic characterization of the MAPEG superfamily
-
Bresell A, Weinander R, Lundqvist G, Raza H, Shimoji M, Sun TH, Balk L, Wiklund R, Eriksson J, Jansson C, Persson B, Jakobsson PJ, Morgenstern R. 2005. Bioinformatic and enzymatic characterization of the MAPEG superfamily. FEBS J. 272:1688-1703. http://dx.doi.org/10.1111/j.1742-4658.2005.04596.x.
-
(2005)
FEBS J.
, vol.272
, pp. 1688-1703
-
-
Bresell, A.1
Weinander, R.2
Lundqvist, G.3
Raza, H.4
Shimoji, M.5
Sun, T.H.6
Balk, L.7
Wiklund, R.8
Eriksson, J.9
Jansson, C.10
Persson, B.11
Jakobsson, P.J.12
Morgenstern, R.13
-
45
-
-
84869068072
-
Characterization of a Phanerochaete chrysosporium glutathione transferase reveals a novel structural and functional class with ligandin properties
-
Mathieu Y, Prosper P, Buee M, Dumarcay S, Favier F, Gelhaye E, Gerardin P, Harvengt L, Jacquot JP, Lamant T, Meux E, Mathiot S, Didierjean C, Morel M. 2012. Characterization of a Phanerochaete chrysosporium glutathione transferase reveals a novel structural and functional class with ligandin properties. J. Biol. Chem. 287:39001-39011. http://dx.doi.org/10.1074/jbc. M112.402776.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 39001-39011
-
-
Mathieu, Y.1
Prosper, P.2
Buee, M.3
Dumarcay, S.4
Favier, F.5
Gelhaye, E.6
Gerardin, P.7
Harvengt, L.8
Jacquot, J.P.9
Lamant, T.10
Meux, E.11
Mathiot, S.12
Didierjean, C.13
Morel, M.14
-
46
-
-
0032491515
-
A novel membrane-bound glutathione S-transferase functions in the stationary phase of the yeast Saccharomyces cerevisiae
-
Choi JH, Lou W, Vancura A. 1998. A novel membrane-bound glutathione S-transferase functions in the stationary phase of the yeast Saccharomyces cerevisiae. J. Biol. Chem. 273:29915-29922. http://dx.doi.org/10.1074/jbc.273.45.29915.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 29915-29922
-
-
Choi, J.H.1
Lou, W.2
Vancura, A.3
-
48
-
-
58049200678
-
2 during growth of Saccharomyces cerevisiae
-
2 during growth of Saccharomyces cerevisiae. Redox Rep. 13:246-254. http://dx.doi.org/10.1179/135100008X309028.
-
(2008)
Redox Rep.
, vol.13
, pp. 246-254
-
-
Mariani, D.1
Mathias, C.J.2
da Silva, C.G.3
Herdeiro, R.D.4
Pereira, R.5
Panek, A.D.6
Eleutherio, E.C.A.7
Pereira, M.D.8
-
49
-
-
29744463864
-
Gpx2, encoding a phospholipid hydroperoxide glutathione peroxidase homologue, codes for an atypical 2-Cys peroxiredoxin in Saccharomyces cerevisiae
-
Tanaka T, Izawa S, Inoue Y. 2005. Gpx2, encoding a phospholipid hydroperoxide glutathione peroxidase homologue, codes for an atypical 2-Cys peroxiredoxin in Saccharomyces cerevisiae. J. Biol. Chem. 280: 42078-42087. http://dx.doi.org/10.1074/jbc. M508622200.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 42078-42087
-
-
Tanaka, T.1
Izawa, S.2
Inoue, Y.3
-
50
-
-
9644287905
-
The yeast prion protein Ure2 shows glutathione peroxidase activity in both native and fibrillar forms
-
Bai M, Zhou JM, Perrett S. 2004. The yeast prion protein Ure2 shows glutathione peroxidase activity in both native and fibrillar forms. J. Biol. Chem. 279:50025-50030. http://dx.doi.org/10.1074/jbc. M406612200.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 50025-50030
-
-
Bai, M.1
Zhou, J.M.2
Perrett, S.3
-
51
-
-
3342919252
-
Regulation of 4-hydroxynonenal-mediated signaling by glutathione S-transferases
-
Awasthi YC, Yang Y, Tiwari NK, Patrick B, Sharma A, Li J, Awasthi S. 2004. Regulation of 4-hydroxynonenal-mediated signaling by glutathione S-transferases. Free Radic. Biol. Med. 37:607-619. http://dx.doi.org/10.1016/j.freeradbiomed.2004.05.033.
-
(2004)
Free Radic. Biol. Med.
, vol.37
, pp. 607-619
-
-
Awasthi, Y.C.1
Yang, Y.2
Tiwari, N.K.3
Patrick, B.4
Sharma, A.5
Li, J.6
Awasthi, S.7
-
52
-
-
0025814980
-
Chemistry and biochemistry of 4-hydroxynonenal, malonaldehyde and related aldehydes
-
Esterbauer H, Schaur RJ, Zollner H. 1991. Chemistry and biochemistry of 4-hydroxynonenal, malonaldehyde and related aldehydes. Free Radic. Biol. Med. 11:81-128. http://dx.doi.org/10.1016/0891-5849(91)90192-6.
-
(1991)
Free Radic. Biol. Med.
, vol.11
, pp. 81-128
-
-
Esterbauer, H.1
Schaur, R.J.2
Zollner, H.3
-
53
-
-
84862174834
-
The genome portal of the Department of Energy Joint Genome Institute
-
Grigoriev IV, Nordberg H, Shabalov I, Aerts A, Cantor M, Goodstein D, Kuo A, Minovitsky S, Nikitin R, Ohm RA, Otillar R, Poliakov A, Ratnere I, Riley R, Smirnova T, Rokhsar D, Dubchak I. 2012. The genome portal of the Department of Energy Joint Genome Institute. Nucleic Acids Res. 40:D26-D32. http://dx.doi.org/10.1093/nar/gkr947.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. D26-D32
-
-
Grigoriev, I.V.1
Nordberg, H.2
Shabalov, I.3
Aerts, A.4
Cantor, M.5
Goodstein, D.6
Kuo, A.7
Minovitsky, S.8
Nikitin, R.9
Ohm, R.A.10
Otillar, R.11
Poliakov, A.12
Ratnere, I.13
Riley, R.14
Smirnova, T.15
Rokhsar, D.16
Dubchak, I.17
-
55
-
-
0037689542
-
Chemical composition and analysis of wood
-
de Gruyter W (ed). Remagen, Berlin, Germany.
-
Fengel D, Wegener G. 1984. Chemical composition and analysis of wood, p 183-267. In de GruyterW(ed), Wood chemistry, ultrastructures, reactions. Remagen, Berlin, Germany.
-
(1984)
Wood chemistry, ultrastructures, reactions
, pp. 183-267
-
-
Fengel, D.1
Wegener, G.2
-
56
-
-
84876167636
-
Syringyl-rich lignin renders poplars more resistant to degradation by wood decay fungi
-
Skyba O, Douglas CJ, Mansfield SD. 2013. Syringyl-rich lignin renders poplars more resistant to degradation by wood decay fungi. Appl. Environ. Microbiol. 79:2560-2571. http://dx.doi.org/10.1128/AEM.03182-12.
-
(2013)
Appl. Environ. Microbiol.
, vol.79
, pp. 2560-2571
-
-
Skyba, O.1
Douglas, C.J.2
Mansfield, S.D.3
-
57
-
-
79961228770
-
The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi
-
Eastwood DC, Floudas D, Binder M, Majcherczyk A, Schneider P, Aerts A, Asiegbu FO, Baker SE, Barry K, Bendiksby M, Blumentritt M, Coutinho PM, Cullen D, de Vries RP, Gathman A, Goodell B, Henrissat B, Ihrmark K, Kauserud H, Kohler A, LaButti K, Lapidus A, Lavin JL, Lee YH, Lindquist E, Lilly W, Lucas S, Morin E, Murat C, Oguiza JA, Park J, Pisabarro AG, Riley R, Rosling A, Salamov A, Schmidt O, Schmutz J, Skrede I, Stenlid J, Wiebenga A, Xie XF, Kues U, Hibbett DS, Hoffmeister D, Hogberg N, Martin F, Grigoriev IV, Watkinson SC. 2011. The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science 333:762-765. http://dx.doi.org/10.1126/science.1205411.
-
(2011)
Science
, vol.333
, pp. 762-765
-
-
Eastwood, D.C.1
Floudas, D.2
Binder, M.3
Majcherczyk, A.4
Schneider, P.5
Aerts, A.6
Asiegbu, F.O.7
Baker, S.E.8
Barry, K.9
Bendiksby, M.10
Blumentritt, M.11
Coutinho, P.M.12
Cullen, D.13
de Vries, R.P.14
Gathman, A.15
Goodell, B.16
Henrissat, B.17
Ihrmark, K.18
Kauserud, H.19
Kohler, A.20
LaButti, K.21
Lapidus, A.22
Lavin, J.L.23
Lee, Y.H.24
Lindquist, E.25
Lilly, W.26
Lucas, S.27
Morin, E.28
Murat, C.29
Oguiza, J.A.30
Park, J.31
Pisabarro, A.G.32
Riley, R.33
Rosling, A.34
Salamov, A.35
Schmidt, O.36
Schmutz, J.37
Skrede, I.38
Stenlid, J.39
Wiebenga, A.40
Xie, X.F.41
Kues, U.42
Hibbett, D.S.43
Hoffmeister, D.44
Hogberg, N.45
Martin, F.46
Grigoriev, I.V.47
Watkinson, S.C.48
more..
-
58
-
-
84862977387
-
The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
-
Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martinez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Gorecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kues U, Kumar TKA, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-Duenas FJ, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, John FS, Stenlid J, Sun H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pisabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS. 2012. The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science 336:1715-1719. http://dx.doi.org/10.1126/science.1221748.
-
(2012)
Science
, vol.336
, pp. 1715-1719
-
-
Floudas, D.1
Binder, M.2
Riley, R.3
Barry, K.4
Blanchette, R.A.5
Henrissat, B.6
Martinez, A.T.7
Otillar, R.8
Spatafora, J.W.9
Yadav, J.S.10
Aerts, A.11
Benoit, I.12
Boyd, A.13
Carlson, A.14
Copeland, A.15
Coutinho, P.M.16
de Vries, R.P.17
Ferreira, P.18
Findley, K.19
Foster, B.20
Gaskell, J.21
Glotzer, D.22
Gorecki, P.23
Heitman, J.24
Hesse, C.25
Hori, C.26
Igarashi, K.27
Jurgens, J.A.28
Kallen, N.29
Kersten, P.30
Kohler, A.31
Kues, U.32
Kumar, T.K.A.33
Kuo, A.34
LaButti, K.35
Larrondo, L.F.36
Lindquist, E.37
Ling, A.38
Lombard, V.39
Lucas, S.40
Lundell, T.41
Martin, R.42
McLaughlin, D.J.43
Morgenstern, I.44
Morin, E.45
Murat, C.46
Nagy, L.G.47
Nolan, M.48
Ohm, R.A.49
Patyshakuliyeva, A.50
Rokas, A.51
Ruiz-Duenas, F.J.52
Sabat, G.53
Salamov, A.54
Samejima, M.55
Schmutz, J.56
Slot, J.C.57
John, F.S.58
Stenlid, J.59
Sun, H.60
Sun, S.61
Syed, K.62
Tsang, A.63
Wiebenga, A.64
Young, D.65
Pisabarro, A.66
Eastwood, D.C.67
Martin, F.68
Cullen, D.69
Grigoriev, I.V.70
Hibbett, D.S.71
more..
-
59
-
-
52649126318
-
Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium
-
Morel M, Kohler A, Martin F, Gelhaye E, Rouhier N. 2008. Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium. New Phytol. 180:391-407. http://dx.doi.org/10.1111/j.1469-8137.2008.02498.x.
-
(2008)
New Phytol.
, vol.180
, pp. 391-407
-
-
Morel, M.1
Kohler, A.2
Martin, F.3
Gelhaye, E.4
Rouhier, N.5
-
60
-
-
84859466995
-
Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis
-
Fernandez-Fueyo E, Ruiz-Duenas FJ, Ferreira P, Floudas D, Hibbett DS, Canessa P, Larrondo LF, James TY, Seelenfreund D, Lobos S, Polanco R, Tello M, Honda Y, Watanabe T, San RJ, Kubicek CP, Schmoll M, Gaskell J, Hammel KE, St. John FJ, Vanden Wymelenberg A, Sabat G, BonDurant SS, Syed K, Yadav JS, Doddapaneni H, Subramanian V, Lavin JL, Oguiza JA, Perez G, Pisabarro AG, Ramirez L, Santoyo F, Master E, Coutinho PM, Henrissat B, Lombard V, Magnuson JK, Kues U, Hori C, Igarashi K, Samejima M, Held BW, Barry KW, LaButti KM, Lapidus A, Lindquist EA, Lucas SM, Riley R, Salamov AA, Hoffmeister D, Schwenk D, Hadar Y, Yarden O, de Vries RP, Wiebenga A, Stenlid J, Eastwood D, Grigoriev IV, Berka RM, Blanchette RA, Kersten P, Martinez AT, Vicuna R, Cullen D. 2012. Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. Proc. Natl. Acad. Sci. U. S. A. 109:5458-5463. http://dx.doi.org/10.1073/pnas.1119912109.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 5458-5463
-
-
Fernandez-Fueyo, E.1
Ruiz-Duenas, F.J.2
Ferreira, P.3
Floudas, D.4
Hibbett, D.S.5
Canessa, P.6
Larrondo, L.F.7
James, T.Y.8
Seelenfreund, D.9
Lobos, S.10
Polanco, R.11
Tello, M.12
Honda, Y.13
Watanabe, T.14
San, R.J.15
Kubicek, C.P.16
Schmoll, M.17
Gaskell, J.18
Hammel, K.E.19
St John, F.J.20
Vanden Wymelenberg, A.21
Sabat, G.22
BonDurant, S.S.23
Syed, K.24
Yadav, J.S.25
Doddapaneni, H.26
Subramanian, V.27
Lavin, J.L.28
Oguiza, J.A.29
Perez, G.30
Pisabarro, A.G.31
Ramirez, L.32
Santoyo, F.33
Master, E.34
Coutinho, P.M.35
Henrissat, B.36
Lombard, V.37
Magnuson, J.K.38
Kues, U.39
Hori, C.40
Igarashi, K.41
Samejima, M.42
Held, B.W.43
Barry, K.W.44
LaButti, K.M.45
Lapidus, A.46
Lindquist, E.A.47
Lucas, S.M.48
Riley, R.49
Salamov, A.A.50
Hoffmeister, D.51
Schwenk, D.52
Hadar, Y.53
Yarden, O.54
de Vries, R.P.55
Wiebenga, A.56
Stenlid, J.57
Eastwood, D.58
Grigoriev, I.V.59
Berka, R.M.60
Blanchette, R.A.61
Kersten, P.62
Martinez, A.T.63
Vicuna, R.64
Cullen, D.65
more..
-
61
-
-
71849102912
-
Proteomics for biodeterioration of wood (Pinus taeda L.): challenging analysis by 2-D PAGE and MALDITOF/TOF/MS
-
Kang YM, Prewitt ML, Diehl SV. 2009. Proteomics for biodeterioration of wood (Pinus taeda L.): challenging analysis by 2-D PAGE and MALDITOF/TOF/MS. Int. Biodeterior. Biodegrad. 63:1036-1044. http://dx.doi.org/10.1016/j.ibiod.2009.07.008.
-
(2009)
Int. Biodeterior. Biodegrad.
, vol.63
, pp. 1036-1044
-
-
Kang, Y.M.1
Prewitt, M.L.2
Diehl, S.V.3
-
62
-
-
84863395511
-
Expression and regulation of genes encoding lignocellulose-degrading activity in the genus Phanerochaete
-
MacDonald J, Suzuki H, Master ER. 2012. Expression and regulation of genes encoding lignocellulose-degrading activity in the genus Phanerochaete. Appl. Microbiol. Biotechnol. 94:339-351. http://dx.doi.org/10.1007/s00253-012-3937-z.
-
(2012)
Appl. Microbiol. Biotechnol.
, vol.94
, pp. 339-351
-
-
MacDonald, J.1
Suzuki, H.2
Master, E.R.3
-
63
-
-
71849099747
-
Reactive oxygen species in Phanerochaete chrysosporium. Relationship between extracellular oxidative and intracellular antioxidant systems
-
Morel M, Ngadin AA, Jacquot JP, Gelhaye E. 2009. Reactive oxygen species in Phanerochaete chrysosporium. Relationship between extracellular oxidative and intracellular antioxidant systems. Adv. Bot. Res. 52:153-186. http://dx.doi.org/10.1016/S0065-2296(10)52006-8.
-
(2009)
Adv. Bot. Res.
, vol.52
, pp. 153-186
-
-
Morel, M.1
Ngadin, A.A.2
Jacquot, J.P.3
Gelhaye, E.4
-
64
-
-
67149111640
-
Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression
-
Vanden Wymelenberg A, Gaskell J, Mozuch M, Kersten P, Sabat G, Martinez D, Cullen D. 2009. Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression. Appl. Environ. Microbiol. 75:4058-4068. http://dx.doi.org/10.1128/AEM.00314-09.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 4058-4068
-
-
Vanden Wymelenberg, A.1
Gaskell, J.2
Mozuch, M.3
Kersten, P.4
Sabat, G.5
Martinez, D.6
Cullen, D.7
|