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Volumn 9, Issue 1, 2014, Pages

Systematic identification and evolutionary analysis of catalytically versatile cytochrome P450 monooxygenase families enriched in model basidiomycete fungi

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME P450; CYTOCHROME P450 5035; CYTOCHROME P450 512; CYTOCHROME P450 5136; CYTOCHROME P450 5141; CYTOCHROME P450 5144; CYTOCHROME P450 5146; CYTOCHROME P450 5150; CYTOCHROME P450 5348; CYTOCHROME P450 5359; CYTOCHROME P450 63; UNCLASSIFIED DRUG;

EID: 84899496510     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0086683     Document Type: Article
Times cited : (89)

References (58)
  • 5
    • 60549116487 scopus 로고    scopus 로고
    • Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
    • Martinez D, Challacombe J, Morgenstern I, Hibbett D, Schmoll M, et al. (2009) Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. Proc Natl Acad Sci USA 106: 1954-1959.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 1954-1959
    • Martinez, D.1    Challacombe, J.2    Morgenstern, I.3    Hibbett, D.4    Schmoll, M.5
  • 6
    • 79961228770 scopus 로고    scopus 로고
    • The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi
    • Eastwood DC, Floudas D, Binder M, Majcherczyk A, Schneider P, et al. (2011) The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science 333: 762-765.
    • (2011) Science , vol.333 , pp. 762-765
    • Eastwood, D.C.1    Floudas, D.2    Binder, M.3    Majcherczyk, A.4    Schneider, P.5
  • 7
    • 84859466995 scopus 로고    scopus 로고
    • Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis
    • Fernandez-Fueyo E, Ruiz-Dueñas FJ, Ferreira P, Floudas D, Hibbett DS, et al. (2012) Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. Proc Natl Acad Sci USA 109: 5458-5463.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 5458-5463
    • Fernandez-Fueyo, E.1    Ruiz-Dueñas, F.J.2    Ferreira, P.3    Floudas, D.4    Hibbett, D.S.5
  • 8
    • 84862977387 scopus 로고    scopus 로고
    • The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
    • Floudas D, Binder M, Riley R, Barry K, Blanchette RA, et al. (2012) The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science 336: 1715-1719.
    • (2012) Science , vol.336 , pp. 1715-1719
    • Floudas, D.1    Binder, M.2    Riley, R.3    Barry, K.4    Blanchette, R.A.5
  • 9
    • 84863299258 scopus 로고    scopus 로고
    • Genome sequence of the model medicinal mushroom Ganoderma lucidum
    • Chen S, Xu J, Liu C, Zhu Y, Nelson DR, et al. (2012) Genome sequence of the model medicinal mushroom Ganoderma lucidum. Nature Commun 3: 913.
    • (2012) Nature Commun , vol.3 , pp. 913
    • Chen, S.1    Xu, J.2    Liu, C.3    Zhu, Y.4    Nelson, D.R.5
  • 10
    • 84865540130 scopus 로고    scopus 로고
    • Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
    • doi: 10.1186/1471-2164-13-444
    • Suzuki H, MacDonald J, Syed K, Salamov A, Hori C, et al. (2012) Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. BMC Genomics 13: 444. doi: 10.1186/1471-2164-13-444.
    • (2012) BMC Genomics , vol.13 , pp. 444
    • Suzuki, H.1    MacDonald, J.2    Syed, K.3    Salamov, A.4    Hori, C.5
  • 11
  • 12
    • 84892419599 scopus 로고    scopus 로고
    • Genome-wide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the Polyporale species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
    • doi:10.3852/13-002
    • Syed K, Nelson DR, Riley R, Yadav JS (2013) Genome-wide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the Polyporale species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora. Mycologia 105: 1445-1455. doi:10.3852/13-002.
    • (2013) Mycologia , vol.105 , pp. 1445-1455
    • Syed, K.1    Nelson, D.R.2    Riley, R.3    Yadav, J.S.4
  • 13
    • 84880153225 scopus 로고    scopus 로고
    • A world of cytochrome P450s
    • Doi: 10.1098/rstb.2012.0430
    • Nelson DR (2013) A world of cytochrome P450s. Phil. Trans. R. Soc. B. Biol. Sci. 368: 1612 20120430. Doi: 10.1098/rstb.2012.0430.
    • (2013) Phil. Trans. R. Soc. B. Biol. Sci. , vol.368 , pp. 161220120430
    • Nelson, D.R.1
  • 14
    • 33744520321 scopus 로고    scopus 로고
    • Cytochromes P450 as versatile biocatalysts
    • Bernhardt R (2006) Cytochromes P450 as versatile biocatalysts. J Biotechnol 24: 128-145.
    • (2006) J Biotechnol , vol.24 , pp. 128-145
    • Bernhardt, R.1
  • 15
    • 0029163161 scopus 로고
    • Cytochrome P450 proteins and potential utilization in biodegradation
    • Guengerich FP (1995) Cytochrome P450 proteins and potential utilization in biodegradation. Environ Health Perspect 103: 25-28.
    • (1995) Environ Health Perspect , vol.103 , pp. 25-28
    • Guengerich, F.P.1
  • 16
    • 0036560522 scopus 로고    scopus 로고
    • Cytochrome P450 enzymes in the generation of commercial products
    • Guengerich FP (2002) Cytochrome P450 enzymes in the generation of commercial products. Nat Rev Drug Discov 1: 359-366.
    • (2002) Nat Rev Drug Discov , vol.1 , pp. 359-366
    • Guengerich, F.P.1
  • 17
    • 33645050104 scopus 로고    scopus 로고
    • Cytochrome P450s and other enzymes in drug metabolism and toxicity
    • Guengerich FP (2006) Cytochrome P450s and other enzymes in drug metabolism and toxicity. AAPS J 8: E101-E111.
    • (2006) AAPS J , vol.8
    • Guengerich, F.P.1
  • 18
    • 33745652737 scopus 로고    scopus 로고
    • Cytochrome P450 monooxygenases: Perspectives for synthetic application
    • DOI 10.1016/j.tibtech.2006.05.002, PII S0167779906001259
    • Urlacher VB, Eiben S (2006) Cytochrome P450 monooxygenases: Perspectives for synthetic application. Trends Biotechnol 24: 324-330. (Pubitemid 43975576)
    • (2006) Trends in Biotechnology , vol.24 , Issue.7 , pp. 324-330
    • Urlacher, V.B.1    Eiben, S.2
  • 19
    • 84867027657 scopus 로고    scopus 로고
    • P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium
    • Syed K, Yadav JS (2012) P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium. Crit Rev Microbiol 38: 339-363.
    • (2012) Crit Rev Microbiol , vol.38 , pp. 339-363
    • Syed, K.1    Yadav, J.S.2
  • 20
    • 84861905310 scopus 로고    scopus 로고
    • Molecular identification and functional characterization of cytochrome P450 monooxygenases from the brown-rot basidiomycete Postia placenta
    • Ide M, Ichinose H, Wariishi H (2012) Molecular identification and functional characterization of cytochrome P450 monooxygenases from the brown-rot basidiomycete Postia placenta. Arch Microbiol 194: 243-53.
    • (2012) Arch Microbiol , vol.194 , pp. 243-253
    • Ide, M.1    Ichinose, H.2    Wariishi, H.3
  • 21
    • 84867919345 scopus 로고    scopus 로고
    • Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche
    • Morin E, Kohler A, Baker AR, Foulongne-Oriol M, Lombard V, et al. (2012) Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Proc Natl Acad Sci USA 109: 17501-6.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 17501-17506
    • Morin, E.1    Kohler, A.2    Baker, A.R.3    Foulongne-Oriol, M.4    Lombard, V.5
  • 22
    • 78649443323 scopus 로고    scopus 로고
    • Cytochrome P450 enzymes in the fungal kingdom
    • Crešnar B, Petrič S (2011) Cytochrome P450 enzymes in the fungal kingdom. Biochim Biophys Acta 1814: 29-35.
    • (2011) Biochim Biophys Acta , vol.1814 , pp. 29-35
    • Crešnar, B.1    Petrič, S.2
  • 23
    • 84870687032 scopus 로고    scopus 로고
    • Evaluation of structural features in fungal cytochromes P450 predicted to rule catalytic diversification
    • Hlavica P (2013) Evaluation of structural features in fungal cytochromes P450 predicted to rule catalytic diversification. Biochim Biophys Acta 1834: 205-220.
    • (2013) Biochim Biophys Acta , vol.1834 , pp. 205-220
    • Hlavica, P.1
  • 24
    • 84880141746 scopus 로고    scopus 로고
    • Microbial cytochrome P450: Biodiversity and biotechnology, where do cytochrome P450 come from, what do they do and what can they do for us?
    • doi: 10.1098/rstb.2012.0476
    • Kelly SL, Kelly DE (2013) Microbial cytochrome P450: biodiversity and biotechnology, where do cytochrome P450 come from, what do they do and what can they do for us? Phil. Trans. R. Soc. B. Biol. Sci. 368: 1612 20120430 doi: 10.1098/rstb.2012.0476.
    • (2013) Phil. Trans. R. Soc. B. Biol. Sci. , vol.368 , pp. 161220120430
    • Kelly, S.L.1    Kelly, D.E.2
  • 25
    • 0030893379 scopus 로고    scopus 로고
    • 22- desaturase, and inhibition by azole antifungal agents
    • DOI 10.1074/jbc.272.15.9986
    • Kelly SL, Lamb DC, Baldwin BC, Corran AJ, Kelly DE (1997) Characterization of Saccharomyces cerevisiae CYP61, sterol delta22-desaturase, and inhibition by azole antifungal agents. J Biol Chem 272: 9986-9988. (Pubitemid 27171670)
    • (1997) Journal of Biological Chemistry , vol.272 , Issue.15 , pp. 9986-9988
    • Kelly, S.L.1    Lamb, D.C.2    Baldwin, B.C.3    Corran, A.J.4    Kelly, D.E.5
  • 27
    • 54049136514 scopus 로고    scopus 로고
    • CYP56 (Dit2p) in Candida albicans: Characterization and investigation of its role in growth and antifungal drug susceptibility
    • Melo NR, Moran GP, Warrilow AG, Dudley E, Smith SN, et al. (2008) CYP56 (Dit2p) in Candida albicans : characterization and investigation of its role in growth and antifungal drug susceptibility. Antimicrob Agents Chemother 52: 3718-3724.
    • (2008) Antimicrob Agents Chemother , vol.52 , pp. 3718-3724
    • Melo, N.R.1    Moran, G.P.2    Warrilow, A.G.3    Dudley, E.4    Smith, S.N.5
  • 28
    • 0024582440 scopus 로고
    • Characterization of the alkane-inducible cytochrome P450 (P450alk) gene from the yeast Candida tropicalis: Identification of a new P450 gene family
    • DOI 10.1016/0378-1119(89)90014-0
    • Sanglard D, Loper JC (1989) Characterization of the alkane-inducible cytochrome P450 (P450alk) gene from the yeast Candida tropicalis: identification of a new P450 gene family. Gene 76: 121-136. (Pubitemid 19106604)
    • (1989) Gene , vol.76 , Issue.1 , pp. 121-136
    • Sanglard, D.1    Loper, J.C.2
  • 29
    • 0029892430 scopus 로고    scopus 로고
    • Cytochrome P450foxy, a catalytically self-sufficient fatty acid hydroxylase of the fungus Fusarium oxysporum
    • Nakayama N, Takemae A, Shoun H (1996) Cytochrome P450foxy, a catalytically self-sufficient fatty acid hydroxylase of the fungus Fusarium oxysporum. J Biochem 119: 435-440. (Pubitemid 26100928)
    • (1996) Journal of Biochemistry , vol.119 , Issue.3 , pp. 435-440
    • Nakayama, N.1    Takemae, A.2    Shoun, H.3
  • 30
    • 20444361957 scopus 로고    scopus 로고
    • Function of the cypX and moxY genes in aflatoxin biosynthesis in Aspergillus parasiticus
    • DOI 10.1128/AEM.71.6.3192-3198.2005
    • Wen Y, Hatabayashi H, Arai H, Kitamoto HK, Yabe K (2005) Function of the cypX and moxY genes in aflatoxin biosynthesis in Aspergillus parasiticus. Appl Environ Microbiol 71: 3192-3198. (Pubitemid 40807230)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.6 , pp. 3192-3198
    • Wen, Y.1    Hatabayashi, H.2    Arai, H.3    Kitamoto, H.K.4    Yabe, K.5
  • 31
    • 33846147344 scopus 로고    scopus 로고
    • Deletion analysis of FUM genes involved in tricarballylic ester formation during fumonisin biosynthesis
    • DOI 10.1021/jf0617869
    • Butchko RA, Plattner RD, Proctor RH (2006) Deletion analysis of FUM genes involved in tricarballylic ester formation during fumonisin biosynthesis. J Agric Food Chem 54: 9398-9404. (Pubitemid 46086098)
    • (2006) Journal of Agricultural and Food Chemistry , vol.54 , Issue.25 , pp. 9398-9404
    • Butchko, R.A.E.1    Plattner, R.D.2    Proctor, R.H.3
  • 32
    • 34848887815 scopus 로고    scopus 로고
    • Molecular and genetic studies of Fusarium trichothecene biosynthesis: Pathways, genes, and evolution
    • DOI 10.1271/bbb.70183
    • Kimura M, Tokai T, Takahashi-Ando N, Ohsato S, Fujimura M (2007) Molecular and genetic studies of fusarium trichothecene biosynthesis: pathways, genes, and evolution. Biosci Biotechnol Biochem 71: 2105-2123. (Pubitemid 350113090)
    • (2007) Bioscience, Biotechnology and Biochemistry , vol.71 , Issue.9 , pp. 2105-2123
    • Kimura, M.1    Tokai, T.2    Takahashi-Ando, N.3    Ohsato, S.4    Fujimura, M.5
  • 33
    • 0035826779 scopus 로고    scopus 로고
    • The P450-1 gene of Gibberella fujikuroi encodes a multifunctional enzyme in gibberellin biosynthesis
    • Rojas MC, Hedden P, Gaskin P, Tudzynski B (2001) The P450-1 gene of Gibberella fujikuroi encodes a multifunctional enzyme in gibberellin biosynthesis. Proc Natl Acad Sci U S A 98: 5838-5843.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 5838-5843
    • Rojas, M.C.1    Hedden, P.2    Gaskin, P.3    Tudzynski, B.4
  • 34
    • 77956265419 scopus 로고    scopus 로고
    • Genome-to-function characterization of novel fungal P450 monooxygenases oxidizing polycyclic aromatic hydrocarbons (PAHs)
    • Syed K, Doddapaneni H, Subramanian V, Lam YW, Yadav JS (2010) Genome-to-function characterization of novel fungal P450 monooxygenases oxidizing polycyclic aromatic hydrocarbons (PAHs). Biochem Biophys Res Commun 399: 492-7.
    • (2010) Biochem Biophys Res Commun , vol.399 , pp. 492-497
    • Syed, K.1    Doddapaneni, H.2    Subramanian, V.3    Lam, Y.W.4    Yadav, J.S.5
  • 36
    • 79954436898 scopus 로고    scopus 로고
    • Cytochrome b? reductase-cytochrome b? as an active P450 redox enzyme system in Phanerochaete chrysosporium: Atypical properties and in vivo evidence of electron transfer capability to CYP63A2
    • Syed K, Kattamuri C, Thompson TB, Yadav JS (2011) Cytochrome b? reductase-cytochrome b? as an active P450 redox enzyme system in Phanerochaete chrysosporium : atypical properties and in vivo evidence of electron transfer capability to CYP63A2. Arch Biochem Biophys 509: 26-32.
    • (2011) Arch Biochem Biophys , vol.509 , pp. 26-32
    • Syed, K.1    Kattamuri, C.2    Thompson, T.B.3    Yadav, J.S.4
  • 37
    • 84876165352 scopus 로고    scopus 로고
    • CYP63A2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes
    • Syed K, Porollo A, Lam YW, Grimmett PE, Yadav JS (2013) CYP63A2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes. Appl Environ Microbiol 79: 2692-702.
    • (2013) Appl Environ Microbiol , vol.79 , pp. 2692-2702
    • Syed, K.1    Porollo, A.2    Lam, Y.W.3    Grimmett, P.E.4    Yadav, J.S.5
  • 38
    • 77955561065 scopus 로고    scopus 로고
    • Cytochrome P450 monooxygenases involved in anthracene metabolism by the white-rot basidiomycete Phanerochaete chrysosporium
    • Chigu NL, Hirosue S, Nakamura C, Teramoto H, Ichinose H, et al. (2010) Cytochrome P450 monooxygenases involved in anthracene metabolism by the white-rot basidiomycete Phanerochaete chrysosporium. Appl Microbiol Biotechnol 87: 1907-16.
    • (2010) Appl Microbiol Biotechnol , vol.87 , pp. 1907-1916
    • Chigu, N.L.1    Hirosue, S.2    Nakamura, C.3    Teramoto, H.4    Ichinose, H.5
  • 39
    • 77249100797 scopus 로고    scopus 로고
    • Metabolism of mono- and dichloro-dibenzo-p-dioxins by Phanerochaete chrysosporium cytochromes P450
    • Kasai N, Ikushiro S, Shinkyo R, Yasuda K, Hirosue S, et al. (2010) Metabolism of mono- and dichloro-dibenzo-p-dioxins by Phanerochaete chrysosporium cytochromes P450. Appl Microbiol Biotechnol. 86: 773-80.
    • (2010) Appl Microbiol Biotechnol , vol.86 , pp. 773-780
    • Kasai, N.1    Ikushiro, S.2    Shinkyo, R.3    Yasuda, K.4    Hirosue, S.5
  • 40
    • 75649103188 scopus 로고    scopus 로고
    • Atypical kinetics of cytochromes P450 catalysing 3′-hydroxylation of flavone from the white-rot fungus Phanerochaete chrysosporium
    • Kasai N, Ikushiro S, Hirosue S, Arisawa A, Ichinose H, et al. (2010) Atypical kinetics of cytochromes P450 catalysing 3′-hydroxylation of flavone from the white-rot fungus Phanerochaete chrysosporium . J Biochem 147: 117-25.
    • (2010) J Biochem , vol.147 , pp. 117-125
    • Kasai, N.1    Ikushiro, S.2    Hirosue, S.3    Arisawa, A.4    Ichinose, H.5
  • 41
    • 79953163565 scopus 로고    scopus 로고
    • Insight into functional diversity of cytochrome P450 in the white-rot basidiomycete Phanerochaete chrysosporium: Involvement of versatile monooxygenase
    • Hirosue S, Tazaki M, Hiratsuka N, Yanai S, Kabumoto H, et al. (2011) Insight into functional diversity of cytochrome P450 in the white-rot basidiomycete Phanerochaete chrysosporium : Involvement of versatile monooxygenase. Biochem Biophys Res Commun 407: 118-23.
    • (2011) Biochem Biophys Res Commun , vol.407 , pp. 118-123
    • Hirosue, S.1    Tazaki, M.2    Hiratsuka, N.3    Yanai, S.4    Kabumoto, H.5
  • 42
    • 84856096694 scopus 로고    scopus 로고
    • Heterologous expression and mechanistic investigation of a fungal cytochrome P450 (CYP5150A2): Involvement of alternative redox partners
    • Ichinose H, Wariishi H (2012) Heterologous expression and mechanistic investigation of a fungal cytochrome P450 (CYP5150A2): Involvement of alternative redox partners. Arch Biochem Biophys 518: 8-15.
    • (2012) Arch Biochem Biophys , vol.518 , pp. 8-15
    • Ichinose, H.1    Wariishi, H.2
  • 44
    • 84866948231 scopus 로고    scopus 로고
    • Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes
    • doi: 10.1186/1471-2164-13-525
    • Moktali V, Park J, Fedorova-Abrams ND, Park B, Choi J, et al. (2012) Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes. BMC Genomics 13: 525. doi: 10.1186/1471-2164-13- 525.
    • (2012) BMC Genomics , vol.13 , pp. 525
    • Moktali, V.1    Park, J.2    Fedorova-Abrams, N.D.3    Park, B.4    Choi, J.5
  • 45
    • 0023122517 scopus 로고
    • The P450 gene superfamily: Recommended nomenclature
    • Nebert DW, Adesnik M, Coon MJ, Estabrook RW, Gonzalez FJ, et al. (1987) The P450 gene superfamily: Recommended nomenclature. DNA 6: 1-11. (Pubitemid 17033547)
    • (1987) DNA , vol.6 , Issue.1 , pp. 1-11
    • Nebert, D.W.1    Adesnik, M.2    Coon, M.J.3
  • 46
    • 73249132581 scopus 로고    scopus 로고
    • The cytochrome P450 homepage
    • Nelson DR (2009) The cytochrome P450 homepage. Hum Genomics 4: 59-65.
    • (2009) Hum Genomics , vol.4 , pp. 59-65
    • Nelson, D.R.1
  • 47
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 48
    • 0026660413 scopus 로고
    • A simple method for estimating and testing minimum evolution trees
    • Rzhetsky A, Nei M (1992) A simple method for estimating and testing minimum evolution trees. Mol Biol Evol 9: 945-967.
    • (1992) Mol Biol Evol , vol.9 , pp. 945-967
    • Rzhetsky, A.1    Nei, M.2
  • 49
    • 0001895697 scopus 로고
    • Evolutionary divergence and convergence in proteins
    • Bryson V, Vogel HJ, editors. Academic Press, New York
    • Zuckerkandl E, Pauling L (1965) Evolutionary divergence and convergence in proteins. In: Bryson V, Vogel HJ, editors. Evolving Genes and Proteins. Academic Press, New York. 97-166.
    • (1965) Evolving Genes and Proteins , pp. 97-166
    • Zuckerkandl, E.1    Pauling, L.2
  • 51
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 53
    • 28344457845 scopus 로고    scopus 로고
    • Microarray-based global differential expression profiling of P450 monooxygenases and regulatory proteins for signal transduction pathways in the white rot fungus Phanerochaete chrysosporium
    • DOI 10.1007/s00438-005-0051-2
    • Doddapaneni H, Yadav JS (2005) Microarray-based global differential expression profiling of P450 monooxygenases and regulatory proteins for signal transduction pathways in the white rot fungus Phanerochaete chrysosporium . Mol Gen Genomics 274: 454-466. (Pubitemid 41721155)
    • (2005) Molecular Genetics and Genomics , vol.274 , Issue.5 , pp. 454-466
    • Doddapaneni, H.1    Yadav, J.S.2
  • 54
    • 57149087670 scopus 로고    scopus 로고
    • Differential expression in Phanerochaete chrysosporium of membrane-associated proteins relevant to lignin degradation
    • DOI 10.1128/AEM.01997-08
    • Shary S, Kapich AN, Panisko EA, Magnuson JK, Cullen D, et al. (2008) Differential expression in Phanerochaete chrysosporium of membrane-associated proteins relevant to lignin degradation. Appl Environ Microbiol 74: 7252-7257. (Pubitemid 352773598)
    • (2008) Applied and Environmental Microbiology , vol.74 , Issue.23 , pp. 7252-7257
    • Shary, S.1    Kapich, A.N.2    Panisko, E.A.3    Magnuson, J.K.4    Cullen, D.5    Hammel, K.E.6
  • 55
    • 69949170080 scopus 로고    scopus 로고
    • Changes in the gene expression of the white rot fungus Phanerochaete chrysosporium due to the addition of atropine
    • Minami M, Suzuki K, Shimizu A, Hongo T, Sakamoto T, et al. (2009) Changes in the gene expression of the white rot fungus Phanerochaete chrysosporium due to the addition of atropine. Biosci Biotech Biochem 73: 1722-1731.
    • (2009) Biosci Biotech Biochem , vol.73 , pp. 1722-1731
    • Minami, M.1    Suzuki, K.2    Shimizu, A.3    Hongo, T.4    Sakamoto, T.5
  • 56
    • 67149111640 scopus 로고    scopus 로고
    • Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression
    • Vanden Wymelenberg A, Gaskell J, Mozuch M, Kersten P, Sabat G, et al. (2009) Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression. Appl Environ Microbiol 75: 4058-4068.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 4058-4068
    • Vanden Wymelenberg, A.1    Gaskell, J.2    Mozuch, M.3    Kersten, P.4    Sabat, G.5
  • 57
    • 79960107735 scopus 로고    scopus 로고
    • Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species
    • Vanden Wymelenberg A, Gaskell J, Mozuch M, BonDurant SS, Sabat G, et al. (2011) Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species. Appl Environ Microbiol 77: 4499-4507.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 4499-4507
    • Vanden Wymelenberg, A.1    Gaskell, J.2    Mozuch, M.3    BonDurant, S.S.4    Sabat, G.5
  • 58
    • 79958235330 scopus 로고    scopus 로고
    • Transcriptome responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood
    • MacDonald J, Doering M, Canam T, Gong YC, Guttman DS, et al. (2011) Transcriptome responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood. Appl Environ Microbiol 77: 3211-3218.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 3211-3218
    • MacDonald, J.1    Doering, M.2    Canam, T.3    Gong, Y.C.4    Guttman, D.S.5


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