-
1
-
-
0028284325
-
Structure and function studies of plant cell wall polysaccharides
-
Albersheim P, An J, Freshour G, Fuller MS, Guillen R, et al. 1994. Structure and function studies of plant cell wall polysaccharides. Biochem. Soc. Trans. 22:374-78
-
(1994)
Biochem. Soc. Trans.
, vol.22
, pp. 374-378
-
-
Albersheim, P.1
An, J.2
Freshour, G.3
Fuller, M.S.4
Guillen, R.5
-
2
-
-
33748808944
-
Molecular diversity, cultivation, and improved detection by fluorescent in situ hybridization of a dominant group of human gut bacteria related to Roseburia spp. or Eubacterium rectale
-
AminovRI, Walker AW,Duncan SH, HarmsenHJM,WellingGW, FlintHJ. 2006. Molecular diversity, cultivation, and improved detection by fluorescent in situ hybridization of a dominant group of human gut bacteria related to Roseburia spp. or Eubacterium rectale. Appl. Environ. Microb. 72:6371-6
-
(2006)
Appl. Environ. Microb.
, vol.72
, pp. 6371-6376
-
-
Aminov, R.I.1
Walker, A.W.2
Duncan, S.H.3
Harmsen, H.J.M.4
Welling, G.W.5
Flint, H.J.6
-
3
-
-
0024319453
-
Biochemical evidence that starch breakdown by Bacteroides thetaiotaomicron involves outer membrane starch-binding sites and periplasmic starch-degrading enzymes
-
Anderson KL, Salyers AA. 1989. Biochemical evidence that starch breakdown by Bacteroides thetaiotaomicron involves outer membrane starch-binding sites and periplasmic starch-degrading enzymes. J. Bacteriol. 171:3192-98
-
(1989)
J. Bacteriol.
, vol.171
, pp. 3192-3198
-
-
Anderson, K.L.1
Salyers, A.A.2
-
4
-
-
0024336683
-
Genetic evidence that outer membrane binding of starch is required for starch utilization by Bacteroides thetaiotaomicron
-
Anderson KL, Salyers AA. 1989. Genetic evidence that outer membrane binding of starch is required for starch utilization by Bacteroides thetaiotaomicron. J. Bacteriol. 171:3199-204
-
(1989)
J. Bacteriol.
, vol.171
, pp. 3199-3204
-
-
Anderson, K.L.1
Salyers, A.A.2
-
5
-
-
85027927719
-
Enterotypes of the human gut microbiome
-
Arumugam M, Raes J, Pelletier E, Le Paslier D, Yamada T, et al. 2011. Enterotypes of the human gut microbiome. Nature 473:174-80
-
(2011)
Nature
, vol.473
, pp. 174-180
-
-
Arumugam, M.1
Raes, J.2
Pelletier, E.3
Le Paslier, D.4
Yamada, T.5
-
6
-
-
0031764782
-
Cellulose, cellulases and cellulosomes
-
Bayer EA, Chanzy H, Lamed R, Shoham Y. 1998. Cellulose, cellulases and cellulosomes. Curr. Opin. Struct. Biol. 8:548-57
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 548-557
-
-
Bayer, E.A.1
Chanzy, H.2
Lamed, R.3
Shoham, Y.4
-
8
-
-
0027984011
-
The cellulosome - A treasure-trove for biotechnology
-
Bayer EA, Morag E, Lamed R. 1994. The cellulosome-a treasure-trove for biotechnology. Trends Biotechnol. 12:379-86
-
(1994)
Trends Biotechnol.
, vol.12
, pp. 379-386
-
-
Bayer, E.A.1
Morag, E.2
Lamed, R.3
-
9
-
-
0003278764
-
Cellulose-decomposing bacteria and their enzyme systems
-
ed. M Dworkin, S Falkow, E Rosenberg, K-H Schleifer, E Stackebrandt. New York: Springer-Verlag
-
Bayer EA, Shoham Y, Lamed R. 2000. Cellulose-decomposing bacteria and their enzyme systems. In The Prokaryotes: An Evolving Electronic Resource for the Microbiological Community, ed. M Dworkin, S Falkow, E Rosenberg, K-H Schleifer, E Stackebrandt. New York: Springer-Verlag
-
(2000)
The Prokaryotes: An Evolving Electronic Resource for the Microbiological Community
-
-
Bayer, E.A.1
Shoham, Y.2
Lamed, R.3
-
10
-
-
84908200827
-
Lignocellulose-decomposing bacteria and their enzyme systems
-
ed. E Rosenberg Berlin: Springer-Verlag
-
Bayer EA, Shoham Y, Lamed R. 2013. Lignocellulose-decomposing bacteria and their enzyme systems. In The Prokaryotes, ed. E Rosenberg, pp. 216-66. Berlin: Springer-Verlag
-
(2013)
The Prokaryotes
, pp. 216-266
-
-
Bayer, E.A.1
Shoham, Y.2
Lamed, R.3
-
11
-
-
0028088841
-
The biological degradation of cellulose
-
Beguin P, Aubert JP. 1994. The biological degradation of cellulose. FEMS Microbiol. Rev. 13:25-58
-
(1994)
FEMS Microbiol. Rev.
, vol.13
, pp. 25-58
-
-
Beguin, P.1
Aubert, J.P.2
-
13
-
-
4744368323
-
Carbohydrate-binding modules: Fine-tuning polysaccharide recognition
-
Boraston AB, Bolam DN, Gilbert HJ, Davies GJ. 2004. Carbohydrate-binding modules: fine-tuning polysaccharide recognition. Biochem. J. 382:769-81
-
(2004)
Biochem. J.
, vol.382
, pp. 769-781
-
-
Boraston, A.B.1
Bolam, D.N.2
Gilbert, H.J.3
Davies, G.J.4
-
14
-
-
0026448264
-
Purification and partial characterization of two feruloyl esterases from the anaerobic fungus Neocallimastix strain MC-2
-
Borneman WS, Ljungdahl LG, Hartley RD, Akin DE. 1992. Purification and partial characterization of two feruloyl esterases from the anaerobic fungus Neocallimastix strain MC-2. Appl. Environ. Microbiol. 58:3762-66
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 3762-3766
-
-
Borneman, W.S.1
Ljungdahl, L.G.2
Hartley, R.D.3
Akin, D.E.4
-
15
-
-
0026590102
-
Molecular evolution of the fungi: Relationship of the Basidiomycetes, Ascomycetes, and Chytridiomycetes
-
Bowman BH, Taylor JW, Brownlee AG, Lee J, Lu SD, White TJ. 1992. Molecular evolution of the fungi: relationship of the Basidiomycetes, Ascomycetes, and Chytridiomycetes. Mol. Biol. Evol. 9:285-96
-
(1992)
Mol. Biol. Evol.
, vol.9
, pp. 285-296
-
-
Bowman, B.H.1
Taylor, J.W.2
Brownlee, A.G.3
Lee, J.4
Lu, S.D.5
White, T.J.6
-
16
-
-
0034056171
-
Identification of spores in the polycentric anaerobic gut fungi which enhance their ability to survive
-
Brookman JL, Ozkose E, Rogers S, Trinci APJ, Theodorou MK. 2000. Identification of spores in the polycentric anaerobic gut fungi which enhance their ability to survive. FEMS Microbiol. Ecol. 31:261-67
-
(2000)
FEMS Microbiol. Ecol.
, vol.31
, pp. 261-267
-
-
Brookman, J.L.1
Ozkose, E.2
Rogers, S.3
Trinci, A.P.J.4
Theodorou, M.K.5
-
17
-
-
84867238386
-
Multidomain carbohydrate-binding proteins involved in Bacteroides thetaiotaomicron starch metabolism
-
Cameron EA, Maynard MA, Smith CJ, Smith TJ, Koropatkin NM, Martens EC. 2012. Multidomain carbohydrate-binding proteins involved in Bacteroides thetaiotaomicron starch metabolism. J. Biol. Chem. 287:34614-25
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 34614-34625
-
-
Cameron, E.A.1
Maynard, M.A.2
Smith, C.J.3
Smith, T.J.4
Koropatkin, N.M.5
Martens, E.C.6
-
18
-
-
58149200943
-
TheCarbohydrate-Active EnZymes database (CAZy): An expert resource for glycogenomics
-
Cantarel BL,Coutinho PM, RancurelC, Bernard T, Lombard V, Henrissat B. 2009. TheCarbohydrate- Active EnZymes database (CAZy): an expert resource for glycogenomics. Nucleic Acids Res. 37:D233-38
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. D233-D238
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
Henrissat, B.6
-
19
-
-
77956506937
-
The cellulose-degrading microbial community of the human gut varies according to the presence or absence of methanogens
-
Chassard C, Delmas E, Robert C, Bernalier-Donadille A. 2010. The cellulose-degrading microbial community of the human gut varies according to the presence or absence of methanogens. FEMS Microbiol. Ecol. 74:205-13
-
(2010)
FEMS Microbiol. Ecol.
, vol.74
, pp. 205-213
-
-
Chassard, C.1
Delmas, E.2
Robert, C.3
Bernalier-Donadille, A.4
-
20
-
-
34249991725
-
Characterization of the xylan-degrading microbial community from human faeces
-
Chassard C, Goumy V, Leclerc M, Delhomme C, Bernalier-Donadille A. 2007. Characterization of the xylan-degrading microbial community from human faeces. FEMS Microbiol. Ecol. 61:121-31
-
(2007)
FEMS Microbiol. Ecol.
, vol.61
, pp. 121-131
-
-
Chassard, C.1
Goumy, V.2
Leclerc, M.3
Delhomme, C.4
Bernalier-Donadille, A.5
-
21
-
-
0025855242
-
The control and consequences of bacterial fermentation in the human colon
-
Cummings JH, Macfarlane GT. 1991. The control and consequences of bacterial fermentation in the human colon. J. Appl. Bacteriol. 70:443-59
-
(1991)
J. Appl. Bacteriol.
, vol.70
, pp. 443-459
-
-
Cummings, J.H.1
Macfarlane, G.T.2
-
22
-
-
77957075815
-
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
-
De Filippo C, Cavalieri D, Di PaolaM, Ramazzotti M, Poullet JB, et al. 2010. Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proc. Natl. Acad. Sci. USA 107:14691-96
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 14691-14696
-
-
De Filippo, C.1
Cavalieri, D.2
Di Paola, M.3
Ramazzotti, M.4
Poullet, J.B.5
-
23
-
-
0001490216
-
Rumen microbes and digestion of plant cell walls
-
Demeyer DI. 1981. Rumen microbes and digestion of plant cell walls. Agric. Environ. 6:295-337
-
(1981)
Agric. Environ.
, vol.6
, pp. 295-337
-
-
Demeyer, D.I.1
-
24
-
-
0042847292
-
Characterisation of XYN10B, a modular xylanase from the ruminal protozoan Polyplastron multivesiculatum, with a family 22 carbohydrate-binding module that binds to cellulose
-
Devillard E, Bera-Maillet C, Flint HJ, Scott KP, Newbold CJ, et al. 2003. Characterisation of XYN10B, a modular xylanase from the ruminal protozoan Polyplastron multivesiculatum, with a family 22 carbohydrate-binding module that binds to cellulose. Biochem. J. 373:495-503
-
(2003)
Biochem. J.
, vol.373
, pp. 495-503
-
-
Devillard, E.1
Bera-Maillet, C.2
Flint, H.J.3
Scott, K.P.4
Newbold, C.J.5
-
25
-
-
0035108208
-
Cellulosomal scaffoldin-like proteins from Ruminococcus flavefaciens
-
Ding SY, RinconMT, Lamed R,Martin JC, McCrae SI, et al. 2001. Cellulosomal scaffoldin-like proteins from Ruminococcus flavefaciens. J. Bacteriol. 183:1945-53
-
(2001)
J. Bacteriol.
, vol.183
, pp. 1945-1953
-
-
Ding, S.Y.1
Rincon, M.T.2
Lamed, R.3
Martin, J.C.4
McCrae, S.I.5
-
26
-
-
78651112208
-
Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes
-
Dodd D, Mackie RI, Cann IK. 2011. Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes. Mol. Microbiol. 79:292-304
-
(2011)
Mol. Microbiol.
, vol.79
, pp. 292-304
-
-
Dodd, D.1
Mackie, R.I.2
Cann, I.K.3
-
27
-
-
77956914570
-
Transcriptomic analyses of xylan degradation by Prevotella bryantii and insights into energy acquisition by xylanolytic Bacteroidetes
-
Dodd D, Moon YH, Swaminathan K, Mackie RI, Cann IK. 2010. Transcriptomic analyses of xylan degradation by Prevotella bryantii and insights into energy acquisition by xylanolytic Bacteroidetes. J. Biol. Chem. 285:30261-73
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 30261-30273
-
-
Dodd, D.1
Moon, Y.H.2
Swaminathan, K.3
Mackie, R.I.4
Cann, I.K.5
-
28
-
-
33847233644
-
Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrateproducing bacteria in feces
-
Duncan SH, Belenguer A, Holtrop G, Johnstone AM, Flint HJ, Lobley GE. 2007. Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrateproducing bacteria in feces. Appl. Environ. Microbiol. 73:1073-78
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 1073-1078
-
-
Duncan, S.H.1
Belenguer, A.2
Holtrop, G.3
Johnstone, A.M.4
Flint, H.J.5
Lobley, G.E.6
-
29
-
-
20544444045
-
Diversity of the human intestinal microbial flora
-
Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, et al. 2005. Diversity of the human intestinal microbial flora. Science 308:1635-38
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg, P.B.1
Bik, E.M.2
Bernstein, C.N.3
Purdom, E.4
Dethlefsen, L.5
-
30
-
-
84879411201
-
The abundance and variety of carbohydrate-active enzymes in the human gut microbiota
-
El Kaoutari A, Armougom F, Gordon JI, Raoult D, Henrissat B. 2013. The abundance and variety of carbohydrate-active enzymes in the human gut microbiota. Nat. Rev. Microbiol. 11:497-504
-
(2013)
Nat. Rev. Microbiol.
, vol.11
, pp. 497-504
-
-
El Kaoutari, A.1
Armougom, F.2
Gordon, J.I.3
Raoult, D.4
Henrissat, B.5
-
31
-
-
57349113816
-
Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus
-
Ezer A, Matalon E, Jindou S, Borovok I, AtamnaN, et al. 2008. Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus. J. Bacteriol. 190:8220-22
-
(2008)
J. Bacteriol.
, vol.190
, pp. 8220-8222
-
-
Ezer, A.1
Matalon, E.2
Jindou, S.3
Borovok, I.4
Atamna, N.5
-
32
-
-
0033214507
-
A modular cinnamoyl ester hydrolase from the anaerobic fungus Piromyces equi acts synergistically with xylanase and is part of a multiprotein cellulose-binding cellulase-hemicellulase complex
-
Fillingham IJ, Kroon PA,Williamson G, Gilbert HJ, Hazlewood GP. 1999. A modular cinnamoyl ester hydrolase from the anaerobic fungus Piromyces equi acts synergistically with xylanase and is part of a multiprotein cellulose-binding cellulase-hemicellulase complex. Biochem. J. 343:215-24
-
(1999)
Biochem. J.
, vol.343
, pp. 215-224
-
-
Fillingham, I.J.1
Kroon, P.A.2
Williamson, G.3
Gilbert, H.J.4
Hazlewood, G.P.5
-
33
-
-
38349049462
-
Polysaccharide utilization by gut bacteria: Potential for new insights from genomic analysis
-
Flint HJ, Bayer EA, Rincon MT, Lamed R, White BA. 2008. Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis. Nature Rev. Microbiol. 6:121-31
-
(2008)
Nature Rev. Microbiol.
, vol.6
, pp. 121-131
-
-
Flint, H.J.1
Bayer, E.A.2
Rincon, M.T.3
Lamed, R.4
White, B.A.5
-
34
-
-
0001927373
-
Polysaccharide degradation in the rumen: Biochemistry and genetics
-
ed. WV Engelhardt, S Leonard-Marek, G Breves, D Giesecke Stuttgart, Ger.: Ferdinand Enke Verlag
-
Flint HJ, Forsberg CW. 1995. Polysaccharide degradation in the rumen: biochemistry and genetics. In Ruminant Physiology: Digestion,Metabolism, Growth and Reproduction: Proceedings of the Eighth International Symposium on Ruminant Physiology, ed.WVEngelhardt, S Leonard-Marek,GBreves,DGiesecke, pp. 43-70 Stuttgart, Ger.: Ferdinand Enke Verlag
-
(1995)
Ruminant Physiology: Digestion, Metabolism, Growth and Reproduction: Proceedings of the Eighth International Symposium on Ruminant Physiology
, pp. 43-70
-
-
Flint, H.J.1
Forsberg, C.W.2
-
35
-
-
0027231373
-
A bifunctional enzyme, with separate xylanase and β(1,3-1,4)-glucanase domains, encoded by the xynD gene of Ruminococcus flavefaciens
-
Flint HJ, Martin J, McPherson CA, Daniel AS, Zhang J-X. 1993. A bifunctional enzyme, with separate xylanase and β (1,3-1,4)-glucanase domains, encoded by the xynD gene of Ruminococcus flavefaciens. J. Bacteriol. 175:2943-51
-
(1993)
J. Bacteriol.
, vol.175
, pp. 2943-2951
-
-
Flint, H.J.1
Martin, J.2
McPherson, C.A.3
Daniel, A.S.4
Zhang, J.-X.5
-
36
-
-
84863871551
-
Microbial degradation of complex carbohydrates in the gut
-
Flint HJ, Scott KP, Duncan SH, Louis P, Forano E. 2012. Microbial degradation of complex carbohydrates in the gut. Gut Microbes 3:289-306
-
(2012)
Gut Microbes
, vol.3
, pp. 289-306
-
-
Flint, H.J.1
Scott, K.P.2
Duncan, S.H.3
Louis, P.4
Forano, E.5
-
38
-
-
0031031865
-
Interrupted catalytic domain structures in xylanases from two distantly related strains of Prevotella ruminicola
-
Flint HJ, Whitehead TR, Martin JC, Gasparic A. 1997. Interrupted catalytic domain structures in xylanases from two distantly related strains of Prevotella ruminicola. Bba-Protein Struct. M 1337:161-5
-
(1997)
Bba-Protein Struct. M
, vol.1337
, pp. 161-165
-
-
Flint, H.J.1
Whitehead, T.R.2
Martin, J.C.3
Gasparic, A.4
-
39
-
-
0033995545
-
Horizontal gene transfer of glycosyl hydrolases of the rumen fungi
-
Garcia-Vallve S, Romeu A, Palau J. 2000. Horizontal gene transfer of glycosyl hydrolases of the rumen fungi. Mol. Biol. Evol. 17:352-61
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 352-361
-
-
Garcia-Vallve, S.1
Romeu, A.2
Palau, J.3
-
40
-
-
0029146225
-
A xylan hydrolase gene cluster in Prevotella ruminicola B14: Sequence relationships, synergistic interactions, and oxygen sensitivity of a novel enzyme with exoxylanase and β-(1,4)-xylosidase activities
-
Gasparic A, Martin J, Daniel AS, Flint HJ. 1995. A xylan hydrolase gene cluster in Prevotella ruminicola B14: sequence relationships, synergistic interactions, and oxygen sensitivity of a novel enzyme with exoxylanase and β-(1,4)-xylosidase activities. Appl. Environ. Microbiol. 61:2958-64
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 2958-2964
-
-
Gasparic, A.1
Martin, J.2
Daniel, A.S.3
Flint, H.J.4
-
41
-
-
84885472019
-
Advances in understanding the molecular basis of plant cell wall polysaccharide recognition by carbohydrate-binding modules
-
Gilbert HJ, Knox JP, Boraston AB. 2013. Advances in understanding the molecular basis of plant cell wall polysaccharide recognition by carbohydrate-binding modules. Curr. Opin. Struct. Biol. 23:669-77
-
(2013)
Curr. Opin. Struct. Biol.
, vol.23
, pp. 669-677
-
-
Gilbert, H.J.1
Knox, J.P.2
Boraston, A.B.3
-
42
-
-
33846551381
-
Biologys next revolution
-
Goldenfeld N, Woese C. 2007. Biologys next revolution. Nature 445:369
-
(2007)
Nature
, vol.445
, pp. 369
-
-
Goldenfeld, N.1
Woese, C.2
-
43
-
-
0030733350
-
Structural and sequence-based classification of glycoside hydrolases
-
Henrissat B, Davies G. 1997. Structural and sequence-based classification of glycoside hydrolases. Curr. Opin. Struct. Biol. 7:637-44
-
(1997)
Curr. Opin. Struct. Biol.
, vol.7
, pp. 637-644
-
-
Henrissat, B.1
Davies, G.2
-
44
-
-
3142576882
-
Ruminal microorganisms-their significance and nutritional value
-
Hespell RB. 1981. Ruminal microorganisms-their significance and nutritional value. Dev. Indust. Microbiol. 22:261-75
-
(1981)
Dev. Indust. Microbiol.
, vol.22
, pp. 261-275
-
-
Hespell, R.B.1
-
45
-
-
77952257725
-
Microbial enzyme systems for biomass conversion: Emerging paradigms
-
HimmelME, Xu Q, Luo Y, LamedR,Bayer EA. 2010. Microbial enzyme systems for biomass conversion: emerging paradigms. Biofuels 1:323-41
-
(2010)
Biofuels
, vol.1
, pp. 323-341
-
-
Himmel, M.E.1
Xu, Q.2
Luo, Y.3
Lamed, R.4
Bayer, E.A.5
-
46
-
-
0017253248
-
Human fecal flora: Variation in bacterial composition within individuals and a possible effect of emotional stress
-
Holdeman LV, Good IJ, Moore WEC. 1976. Human fecal flora: variation in bacterial composition within individuals and a possible effect of emotional stress. Appl. Environ. Microbiol. 31:359-75
-
(1976)
Appl. Environ. Microbiol.
, vol.31
, pp. 359-375
-
-
Holdeman, L.V.1
Good, I.J.2
Moore, W.E.C.3
-
48
-
-
33751113567
-
Conservation and divergence in cellulosome architecture between two strains of Ruminococcus flavefaciens
-
Jindou S, Borovok I, RinconMT, Flint HJ, Antonopoulos DA, et al. 2006. Conservation and divergence in cellulosome architecture between two strains of Ruminococcus flavefaciens. J. Bacteriol. 188:7971-76
-
(2006)
J. Bacteriol.
, vol.188
, pp. 7971-7976
-
-
Jindou, S.1
Borovok, I.2
Rincon, M.T.3
Flint, H.J.4
Antonopoulos, D.A.5
-
49
-
-
77953143732
-
The unique set of putative membrane-associated anti factors in Clostridium thermocellum suggests a novel extracellular carbohydrate-sensing mechanism involved in gene regulation
-
Kahel-Raifer H, Jindou S, Bahari L, Nataf Y, Shoham Y, et al. 2010. The unique set of putative membrane-associated anti factors in Clostridium thermocellum suggests a novel extracellular carbohydrate-sensing mechanism involved in gene regulation. FEMS Microbiol. Lett. 308:84-93
-
(2010)
FEMS Microbiol. Lett.
, vol.308
, pp. 84-93
-
-
Kahel-Raifer, H.1
Jindou, S.2
Bahari, L.3
Nataf, Y.4
Shoham, Y.5
-
50
-
-
33744476159
-
The functional repertoire of prokaryote cellulosomes includes the serpin superfamily of serine proteinase inhibitors
-
Kang SH, Barak Y, Lamed R, Bayer EA, Morrison M. 2006. The functional repertoire of prokaryote cellulosomes includes the serpin superfamily of serine proteinase inhibitors. Mol. Microbiol. 60:1344-54
-
(2006)
Mol. Microbiol.
, vol.60
, pp. 1344-1354
-
-
Kang, S.H.1
Barak, Y.2
Lamed, R.3
Bayer, E.A.4
Morrison, M.5
-
51
-
-
0001124343
-
The structure of plant cellwalls III: Amodel of the walls of suspension-cultured sycamore cells based on the interconnections of the macromolecular components
-
Keegstra K, TalmadgeKW,BauerWD,Albersheim P. 1973. The structure of plant cellwalls III: amodel of the walls of suspension-cultured sycamore cells based on the interconnections of the macromolecular components. Plant Physiol. 51:188-97
-
(1973)
Plant Physiol.
, vol.51
, pp. 188-197
-
-
Keegstra, K.1
Talmadge, K.W.2
Bauer, W.D.3
Albersheim, P.4
-
53
-
-
0027279670
-
Estimation of ruminal bacteriophage numbers by pulsed-field gel electrophoresis and laser densitometry
-
Klieve AV, Swain RA. 1993. Estimation of ruminal bacteriophage numbers by pulsed-field gel electrophoresis and laser densitometry. Appl. Environ. Microbiol. 59:2299-303
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 2299-2303
-
-
Klieve, A.V.1
Swain, R.A.2
-
55
-
-
46049115447
-
Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices
-
Koropatkin NM, Martens EC, Gordon JI, Smith TJ. 2008. Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices. Structure 16:1105-15
-
(2008)
Structure
, vol.16
, pp. 1105-1115
-
-
Koropatkin, N.M.1
Martens, E.C.2
Gordon, J.I.3
Smith, T.J.4
-
56
-
-
33846956795
-
Selective colonization of insoluble substrates by human faecal bacteria
-
Leitch ECM, Walker AW, Duncan SH, Holtrop G, Flint HJ. 2007. Selective colonization of insoluble substrates by human faecal bacteria. Environ. Microbiol. 9:667-79
-
(2007)
Environ. Microbiol.
, vol.9
, pp. 667-679
-
-
Leitch, E.C.M.1
Walker, A.W.2
Duncan, S.H.3
Holtrop, G.4
Flint, H.J.5
-
57
-
-
0003422388
-
-
New York: WH Freeman. 4th ed
-
Lodish H, Berk A, Zipursky SL, Matsudaira P, Baltimore D, Darnell J. 2000. Molecular Cell Biology. New York:WH Freeman. 4th ed.
-
(2000)
Molecular Cell Biology
-
-
Lodish, H.1
Berk, A.2
Zipursky, S.L.3
Matsudaira, P.4
Baltimore, D.5
Darnell, J.6
-
58
-
-
84855717953
-
Cultured representatives of two major phylogroups of human colonic Faecalibacterium prausnitzii can utilize pectin, uronic acids, and host-derived substrate for growth
-
Lopez-Siles M, Khan TM, Duncan SH, Harmsen HJM, Garcia-Gil LJ, et al. 2012. Cultured representatives of two major phylogroups of human colonic Faecalibacterium prausnitzii can utilize pectin, uronic acids, and host-derived substrate for growth. Appl. Environ. Microbiol. 78:420-28
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 420-428
-
-
Lopez-Siles, M.1
Khan, T.M.2
Duncan, S.H.3
Harmsen, H.J.M.4
Garcia-Gil, L.J.5
-
59
-
-
55249108031
-
Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont
-
Martens EC, Chiang HC, Gordon JI. 2008. Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont. Cell Host Microbe 4:447-57
-
(2008)
Cell Host Microbe
, vol.4
, pp. 447-457
-
-
Martens, E.C.1
Chiang, H.C.2
Gordon, J.I.3
-
60
-
-
69949094849
-
Complex glycan catabolism by the human gut microbiota: The Bacteroidetes Sus-like paradigm
-
Martens EC, Koropatkin NM, Smith TJ, Gordon JI. 2009. Complex glycan catabolism by the human gut microbiota: the Bacteroidetes Sus-like paradigm. J. Biol. Chem. 284:24673-77
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 24673-24677
-
-
Martens, E.C.1
Koropatkin, N.M.2
Smith, T.J.3
Gordon, J.I.4
-
61
-
-
84855173898
-
Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts
-
Martens EC, Lowe EC, Chiang H, Pudlo NA, Wu M, et al. 2011. Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts. PLoS Biol. 9:e1001221
-
(2011)
PLoS Biol.
, vol.9
, pp. e1001221
-
-
Martens, E.C.1
Lowe, E.C.2
Chiang, H.3
Pudlo, N.A.4
Wu, M.5
-
62
-
-
78649734540
-
Resistant starches Types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects
-
Martinez I, Kim J, Duffy PR, Schlegel VL, Walter J. 2010. Resistant starches Types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects. PLoS ONE 5:e15046
-
(2010)
PLoS ONE
, vol.5
, pp. e15046
-
-
Martinez, I.1
Kim, J.2
Duffy, P.R.3
Schlegel, V.L.4
Walter, J.5
-
63
-
-
84872969494
-
Gut microbiome composition is linked to whole grain-induced immunological improvements
-
Martinez I, Lattimer JM, Hubach KL, Case JA, Yang JY, et al. 2013. Gut microbiome composition is linked to whole grain-induced immunological improvements. ISME J. 7:269-80
-
(2013)
ISME J.
, vol.7
, pp. 269-280
-
-
Martinez, I.1
Lattimer, J.M.2
Hubach, K.L.3
Case, J.A.4
Yang, J.Y.5
-
64
-
-
84883154681
-
Effects of diet on resource utilization by a model human gut microbiota containing Bacteroides cellulosilyticus WH2, a symbiont with an extensive glycobiome
-
McNulty NP, Wu M, Erickson AR, Pan CL, Erickson BK, et al. 2013. Effects of diet on resource utilization by a model human gut microbiota containing Bacteroides cellulosilyticus WH2, a symbiont with an extensive glycobiome. PLoS Biol. 11:e1001637
-
(2013)
PLoS Biol.
, vol.11
, pp. e1001637
-
-
McNulty, N.P.1
Wu, M.2
Erickson, A.R.3
Pan, C.L.4
Erickson, B.K.5
-
65
-
-
69949130305
-
Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1
-
MillerMEB, Antonopoulos DA, Rincon MT, BandM, Bari A, et al. 2009. Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1. PLoS ONE 4:e6650
-
(2009)
PLoS ONE
, vol.4
, pp. e6650
-
-
Meb, M.1
Antonopoulos, D.A.2
Rincon, M.T.3
Band, M.4
Bari, A.5
-
66
-
-
77954461699
-
Dietary fibre degradation and fermentation by two xylanolytic bacteria Bacteroides xylanisolvens XB1AT and Roseburia intestinalis XB6B4 from the human intestine
-
Mirande C, Kadlecikova E, Matulova M, Capek P, Bernalier-Donadille A, et al. 2010. Dietary fibre degradation and fermentation by two xylanolytic bacteria Bacteroides xylanisolvens XB1AT and Roseburia intestinalis XB6B4 from the human intestine. J. Appl. Microbiol. 109:451-60
-
(2010)
J. Appl. Microbiol.
, vol.109
, pp. 451-460
-
-
Mirande, C.1
Kadlecikova, E.2
Matulova, M.3
Capek, P.4
Bernalier-Donadille, A.5
-
67
-
-
77955557236
-
Characterization of Xyn10A, a highly active xylanase from the human gut bacterium Bacteroides xylanisolvens XB1A
-
Mirande C, Mosoni P, Bera-Maillet C, Bernalier-Donadille A, Forano E. 2010. Characterization of Xyn10A, a highly active xylanase from the human gut bacterium Bacteroides xylanisolvens XB1A. Appl. Microbiol. Biol. 87:2097-105
-
(2010)
Appl. Microbiol. Biol.
, vol.87
, pp. 2097-2105
-
-
Mirande, C.1
Mosoni, P.2
Bera-Maillet, C.3
Bernalier-Donadille, A.4
Forano, E.5
-
68
-
-
0031437202
-
Degradation and utilization of xylans by the rumen anaerobe Prevotella bryantii (formerly P ruminicola subsp brevis) β14
-
Miyazaki K,Martin JC, Marinsek-Logar R, Flint HJ. 1997. Degradation and utilization of xylans by the rumen anaerobe Prevotella bryantii (formerly P. ruminicola subsp brevis) β14. Anaerobe 3:373-81
-
(1997)
Anaerobe
, vol.3
, pp. 373-381
-
-
Miyazaki, K.1
Martin, J.C.2
Marinsek-Logar, R.3
Flint, H.J.4
-
69
-
-
0037378562
-
Involvement of the multidomain regulatory protein XynR in positive control of xylanase gene expression in the ruminal anaerobe Prevotella bryantii B14
-
MiyazakiK,MiyamotoH,MercerDK, Hirase T, Martin JC, et al. 2003. Involvement of the multidomain regulatory protein XynR in positive control of xylanase gene expression in the ruminal anaerobe Prevotella bryantii B14. J. Bacteriol. 185:2219-26
-
(2003)
J. Bacteriol.
, vol.185
, pp. 2219-2226
-
-
Miyazaki, K.1
Miyamoto, H.2
Mercer, D.K.3
Hirase, T.4
Martin, J.C.5
-
70
-
-
43849099222
-
Pectin structure and biosynthesis
-
Mohnen D. 2008. Pectin structure and biosynthesis. Curr. Opin. Plant Biol. 11:266-77
-
(2008)
Curr. Opin. Plant Biol.
, vol.11
, pp. 266-277
-
-
Mohnen, D.1
-
71
-
-
54949084244
-
Characterization of ApuB, an extracellular type II amylopullulanase from Bifidobacterium breve UCC2003
-
MotherwayMO, Fitzgerald GF,Neirynck S,Ryan S, Steidler L, Van Sinderen D. 2008. Characterization of ApuB, an extracellular type II amylopullulanase from Bifidobacterium breve UCC2003. Appl. Environ. Microb. 74:6271-9
-
(2008)
Appl. Environ. Microb.
, vol.74
, pp. 6271-6279
-
-
Motherway, M.O.1
Fitzgerald, G.F.2
Neirynck, S.3
Ryan, S.4
Steidler, L.5
Van Sinderen, D.6
-
72
-
-
0034132054
-
Characterization of the cellulolytic complex (cellulosome) from Ruminococcus albus
-
Ohara H, Karita S, Kimura T, Sakka K, Ohmiya K. 2000. Characterization of the cellulolytic complex (cellulosome) from Ruminococcus albus. Biosci. Biotech. Biochem. 64:254-60
-
(2000)
Biosci. Biotech. Biochem.
, vol.64
, pp. 254-260
-
-
Ohara, H.1
Karita, S.2
Kimura, T.3
Sakka, K.4
Ohmiya, K.5
-
73
-
-
0002226639
-
The role of ciliate protozoa and fungi in the rumen digestion of plant cell walls
-
Orpin CG. 1983. The role of ciliate protozoa and fungi in the rumen digestion of plant cell walls. Anim. Feed Sci. Technol. 10:121-43
-
(1983)
Anim. Feed Sci. Technol.
, vol.10
, pp. 121-143
-
-
Orpin, C.G.1
-
74
-
-
0002203112
-
Comparison of foregut and hindgut fermentation in herbivores
-
ed. GG Montgomery Washington, DC: Smithson. Inst
-
Parra R. 1978. Comparison of foregut and hindgut fermentation in herbivores. In The Ecology of Arboreal Folivores, ed. GG Montgomery, pp. 205-29. Washington, DC: Smithson. Inst.
-
(1978)
The Ecology of Arboreal Folivores
, pp. 205-229
-
-
Parra, R.1
-
75
-
-
78149466996
-
Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: Insights into their environmental niche
-
Purushe J, Fouts DE, Morrison M,White BA, Mackie RI, et al. 2010. Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche. Microb. Ecol. 60:721-29
-
(2010)
Microb. Ecol.
, vol.60
, pp. 721-729
-
-
Purushe, J.1
Fouts, D.E.2
Morrison, M.3
White, B.A.4
Mackie, R.I.5
-
76
-
-
40449132569
-
Cel9D, an atypical 1,4-β-D-glucan glucohydrolase from Fibrobacter succinogenes: Characteristics, catalytic residues, and synergistic interactions with other cellulases
-
Qi M, Jun HS, Forsberg CW. 2008. Cel9D, an atypical 1,4-β-D-glucan glucohydrolase from Fibrobacter succinogenes: characteristics, catalytic residues, and synergistic interactions with other cellulases. J. Bacteriol. 190:1976-84
-
(2008)
J. Bacteriol.
, vol.190
, pp. 1976-1984
-
-
Qi, M.1
Jun, H.S.2
Forsberg, C.W.3
-
77
-
-
79957841562
-
Snapshot of the eukaryotic gene expression in muskoxen rumen - A metatranscriptomic approach
-
Qi M, Wang P, OToole N, Barboza PS, Ungerfeld E, et al. 2011. Snapshot of the eukaryotic gene expression in muskoxen rumen-a metatranscriptomic approach. PLoS One 6:e20521
-
(2011)
PLoS One
, vol.6
, pp. e20521
-
-
Qi, M.1
Wang, P.2
Otoole, N.3
Barboza, P.S.4
Ungerfeld, E.5
-
78
-
-
17644400112
-
The Ruminococcus albus pilA1-pilA2 locus: Expression and putative role of two adjacent pil genes in pilus formation and bacterial adhesion to cellulose
-
Rakotoarivonina H, Larson MA, Morrison M, Girardeau JP, Gaillard-Martinie B, et al. 2005. The Ruminococcus albus pilA1-pilA2 locus: expression and putative role of two adjacent pil genes in pilus formation and bacterial adhesion to cellulose. Microbiology 151:1291-99
-
(2005)
Microbiology
, vol.151
, pp. 1291-1299
-
-
Rakotoarivonina, H.1
Larson, M.A.2
Morrison, M.3
Girardeau, J.P.4
Gaillard-Martinie, B.5
-
79
-
-
33750939775
-
Cell-associated α-amylases of butyrateproducing Firmicute bacteria from the human colon
-
Ramsay AG, Scott KP, Martin JC, RinconMT, Flint HJ. 2006. Cell-associated α-amylases of butyrateproducing Firmicute bacteria from the human colon. Microbiology 152:3281-90
-
(2006)
Microbiology
, vol.152
, pp. 3281-3290
-
-
Ramsay, A.G.1
Scott, K.P.2
Martin, J.C.3
Rincon, M.T.4
Flint, H.J.5
-
80
-
-
0031015878
-
Characterization of four outer membrane proteins that play a role in utilization of starch by Bacteroides thetaiotaomicron
-
Reeves AR,Wang GR, Salyers AA. 1997. Characterization of four outer membrane proteins that play a role in utilization of starch by Bacteroides thetaiotaomicron. J. Bacteriol. 179:643-9
-
(1997)
J. Bacteriol.
, vol.179
, pp. 643-649
-
-
Reeves, A.R.1
Wang, G.R.2
Salyers, A.A.3
-
81
-
-
34347369555
-
A novel cell surface-anchored cellulose-binding protein encoded by the sca gene cluster of Ruminococcus flavefaciens
-
Rincon MT, Cepeljnik T, Martin JC, Barak Y, Lamed R, et al. 2007. A novel cell surface-anchored cellulose-binding protein encoded by the sca gene cluster of Ruminococcus flavefaciens. J. Bacteriol. 189:4774-83
-
(2007)
J. Bacteriol.
, vol.189
, pp. 4774-4783
-
-
Rincon, M.T.1
Cepeljnik, T.2
Martin, J.C.3
Barak, Y.4
Lamed, R.5
-
82
-
-
27744600973
-
Unconventional mode of attachment of the Ruminococcus flavefaciens cellulosome to the cell surface
-
Rincon MT,CepeljnikT,Martin JC, LamedR, Barak Y, et al. 2005. Unconventional mode of attachment of the Ruminococcus flavefaciens cellulosome to the cell surface. J. Bacteriol. 187:7569-78
-
(2005)
J. Bacteriol.
, vol.187
, pp. 7569-7578
-
-
Rincon, M.T.1
Cepeljnik, T.2
Martin, J.C.3
Lamed, R.4
Barak, Y.5
-
83
-
-
77957935787
-
Abundance and diversity of dockerincontaining proteins in the fiber-degrading rumen bacterium Ruminococcus flavefaciens FD-1
-
Rincon MT, Dassa B, Flint HJ, Travis AJ, Jindou S, et al. 2010. Abundance and diversity of dockerincontaining proteins in the fiber-degrading rumen bacterium, Ruminococcus flavefaciens FD-1. PLoS ONE 5:e12476
-
(2010)
PLoS ONE
, vol.5
, pp. e12476
-
-
Rincon, M.T.1
Dassa, B.2
Flint, H.J.3
Travis, A.J.4
Jindou, S.5
-
84
-
-
1942539976
-
ScaC, an adaptor protein carrying a novel cohesin that expands the dockerin-binding repertoire of the Ruminococcus flavefaciens 17 cellulosome
-
Rincon MT, Martin JC, Aurilia V, McCrae SI, Rucklidge GJ, et al. 2004. ScaC, an adaptor protein carrying a novel cohesin that expands the dockerin-binding repertoire of the Ruminococcus flavefaciens 17 cellulosome. J. Bacteriol. 186:2576-85
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2576-2585
-
-
Rincon, M.T.1
Martin, J.C.2
Aurilia, V.3
McCrae, S.I.4
Rucklidge, G.J.5
-
85
-
-
0035487187
-
EndB, a multidomain family 44 cellulase from Ruminococcus flavefaciens 17, binds to cellulose via a novel cellulose-binding module and to another R flavefaciens protein via a dockerin domain
-
Rincon MT, McCrae SI, Kirby J, Scott KP, Flint HJ. 2001. EndB, a multidomain family 44 cellulase from Ruminococcus flavefaciens 17, binds to cellulose via a novel cellulose-binding module and to another R. flavefaciens protein via a dockerin domain. Appl. Environ. Microbiol. 67:4426-31
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 4426-4431
-
-
Rincon, M.T.1
McCrae, S.I.2
Kirby, J.3
Scott, K.P.4
Flint, H.J.5
-
86
-
-
0142123359
-
The cellulolytic microflora of the human colon: Evidence of microcrystalline cellulose-degrading bacteria in methane-excreting subjects
-
Robert C, Bernalier-Donadille A. 2003. The cellulolytic microflora of the human colon: evidence of microcrystalline cellulose-degrading bacteria in methane-excreting subjects.FEMSMicrobiol. Ecol. 46:81-89
-
(2003)
FEMS Microbiol Ecol.
, vol.46
, pp. 81-89
-
-
Robert, C.1
Bernalier-Donadille, A.2
-
87
-
-
34547421701
-
Bacteroides cellulosilyticus sp nov, a cellulolytic bacterium from the human gut microbial community
-
Robert C, Chassard C, Lawson PA, Bernalier-Donadille A. 2007. Bacteroides cellulosilyticus sp. nov., a cellulolytic bacterium from the human gut microbial community. Int. J. Syst. Evol. Microbiol. 57:1516-20
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 1516-1520
-
-
Robert, C.1
Chassard, C.2
Lawson, P.A.3
Bernalier-Donadille, A.4
-
89
-
-
33747360729
-
Screening for and identification of starch-, amylopectin-, and pullulan-degrading activities in bifidobacterial strains
-
Ryan SM, Fitzgerald GF, van Sinderen D. 2006. Screening for and identification of starch-, amylopectin-, and pullulan-degrading activities in bifidobacterial strains. Appl. Environ. Microbiol. 72:5289-96
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5289-5296
-
-
Ryan, S.M.1
Fitzgerald, G.F.2
Van Sinderen, D.3
-
91
-
-
0034840478
-
The cellulosome and cellulose degradation by anaerobic bacteria
-
Schwarz WH. 2001. The cellulosome and cellulose degradation by anaerobic bacteria. Appl. Microbiol. Biotechnol. 56:634-49
-
(2001)
Appl. Microbiol. Biotechnol.
, vol.56
, pp. 634-649
-
-
Schwarz, W.H.1
-
92
-
-
79952765513
-
Substrate-driven gene expression in Roseburia inulinivorans: Importance of inducible enzymes in the utilization of inulin and starch
-
Scott KP, Martin JC, Chassard C, Clerget M, Potrykus J, et al. 2011. Substrate-driven gene expression in Roseburia inulinivorans: importance of inducible enzymes in the utilization of inulin and starch. Proc. Natl. Acad. Sci. USA 108:4672-79
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 4672-4679
-
-
Scott, K.P.1
Martin, J.C.2
Chassard, C.3
Clerget, M.4
Potrykus, J.5
-
93
-
-
84891485214
-
Prebiotic stimulation of human colonic butyrateproducing bacteria and bifidobacteria, in vitro
-
Scott KP, Martin JC, Duncan SH, Flint HJ. 2013. Prebiotic stimulation of human colonic butyrateproducing bacteria and bifidobacteria, in vitro. FEMS Microbiol. Ecol. 87:30-40
-
(2013)
FEMS Microbiol. Ecol.
, vol.87
, pp. 30-40
-
-
Scott, K.P.1
Martin, J.C.2
Duncan, S.H.3
Flint, H.J.4
-
94
-
-
0345148490
-
Physiological characterization of SusG, an outer membrane protein essential for starch utilization by Bacteroides thetaiotaomicron
-
Shipman JA, Cho KH, Siegel HA, Salyers AA. 1999. Physiological characterization of SusG, an outer membrane protein essential for starch utilization by Bacteroides thetaiotaomicron. J. Bacteriol. 181:7206-11
-
(1999)
J. Bacteriol.
, vol.181
, pp. 7206-7211
-
-
Shipman, J.A.1
Cho, K.H.2
Siegel, H.A.3
Salyers, A.A.4
-
95
-
-
0019433939
-
Neutral detergent fiber, hemicellulose and cellulose digestibility in human subjects
-
Slavin JL, Brauer PM, Marlett JA. 1981. Neutral detergent fiber, hemicellulose and cellulose digestibility in human subjects. J. Nutr. 111:287-97
-
(1981)
J. Nutr.
, vol.111
, pp. 287-297
-
-
Slavin, J.L.1
Brauer, P.M.2
Marlett, J.A.3
-
96
-
-
33745043692
-
A hybrid two-component system protein of a prominent human gut symbiont couples glycan sensing in vivo to carbohydrate metabolism
-
Sonnenburg ED, Sonnenburg JL, Manchester JK, Hansen EE, Chiang HC, Gordon JI. 2006. A hybrid two-component system protein of a prominent human gut symbiont couples glycan sensing in vivo to carbohydrate metabolism. Proc. Natl. Acad. Sci. USA 103:8834-39
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 8834-8839
-
-
Sonnenburg, E.D.1
Sonnenburg, J.L.2
Manchester, J.K.3
Hansen, E.E.4
Chiang, H.C.5
Gordon, J.I.6
-
97
-
-
15544376418
-
Glycan foraging in vivo by an intestine-adapted bacterial symbiont
-
Sonnenburg JL, Xu J, Leip DD, Chen CH, Westover BP, et al. 2005. Glycan foraging in vivo by an intestine-adapted bacterial symbiont. Science 307:1955-59
-
(2005)
Science
, vol.307
, pp. 1955-1959
-
-
Sonnenburg, J.L.1
Xu, J.2
Leip, D.D.3
Chen, C.H.4
Westover, B.P.5
-
98
-
-
80053595108
-
Complete genome of the cellulolytic ruminal bacterium Ruminococcus albus 7
-
Suen G, Stevenson DM, Bruce DC, Chertkov O, Copeland A, et al. 2011. Complete genome of the cellulolytic ruminal bacterium Ruminococcus albus 7. J. Bacteriol. 193:5574-75
-
(2011)
J. Bacteriol.
, vol.193
, pp. 5574-5575
-
-
Suen, G.1
Stevenson, D.M.2
Bruce, D.C.3
Chertkov, O.4
Copeland, A.5
-
99
-
-
79955446915
-
The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist
-
Suen G, Weimer PJ, StevensonDM, Aylward FO, Boyum J, et al. 2011. The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist. PLoS ONE 6:e18814
-
(2011)
PLoS ONE
, vol.6
, pp. e18814
-
-
Suen, G.1
Weimer, P.J.2
Stevenson, D.M.3
Aylward, F.O.4
Boyum, J.5
-
100
-
-
0025198865
-
Enumeration and presumptive identification of some functional groups of bacteria in the rumen of dairy cows fed grass silage-based diets
-
Van Gylswyk NO. 1990. Enumeration and presumptive identification of some functional groups of bacteria in the rumen of dairy cows fed grass silage-based diets. FEMS Microbiol. Lett. 73:243-53
-
(1990)
FEMS Microbiol. Lett.
, vol.73
, pp. 243-253
-
-
Van Gylswyk, N.O.1
-
102
-
-
0022814636
-
The role of ciliate protozoa in nutrition of the ruminant
-
Veira DM. 1986. The role of ciliate protozoa in nutrition of the ruminant. J. Anim. Sci. 63:1547-60
-
(1986)
J. Anim. Sci.
, vol.63
, pp. 1547-1560
-
-
Veira, D.M.1
-
103
-
-
84878631904
-
Expression of cellulosome components and type IV pili within the extracellular proteome of Ruminococcus flavefaciens 007
-
Vodovnik M, Duncan SH, Reid MD, Cantlay L, Turner K, et al. 2013. Expression of cellulosome components and type IV pili within the extracellular proteome of Ruminococcus flavefaciens 007. PLoS ONE 8:e65333
-
(2013)
PLoS ONE
, vol.8
, pp. e65333
-
-
Vodovnik, M.1
Duncan, S.H.2
Reid, M.D.3
Cantlay, L.4
Turner, K.5
-
104
-
-
49749121708
-
The species composition of the human intestinal microbiota differs between particle-associated and liquid phase communities
-
Walker AW,Duncan SH,HarmsenHJ, HoltropG,WellingGW, FlintHJ. 2008. The species composition of the human intestinal microbiota differs between particle-associated and liquid phase communities. Environ. Microbiol. 10:3275-83
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 3275-3283
-
-
Walker, A.W.1
Duncan, S.H.2
Harmsen, H.J.3
Holtrop, G.4
Welling, G.W.5
Flint, H.J.6
-
105
-
-
78751580602
-
Dominant and diet-responsive groups of bacteria within the human colonic microbiota
-
Walker AW, Ince J, Duncan SH, Webster LM, Holtrop G, et al. 2011. Dominant and diet-responsive groups of bacteria within the human colonic microbiota. ISME J. 5:220-30
-
(2011)
ISME J.
, vol.5
, pp. 220-230
-
-
Walker, A.W.1
Ince, J.2
Duncan, S.H.3
Webster, L.M.4
Holtrop, G.5
-
106
-
-
0026669748
-
Genetic analysis of a locus on the Bacteroides ovatus chromosome which contains xylan utilization genes
-
Weaver J, Whitehead TR, Cotta MA, Valentine PC, Salyers AA. 1992. Genetic analysis of a locus on the Bacteroides ovatus chromosome which contains xylan utilization genes. Appl. Environ. Microbiol. 58:2764-70
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 2764-2770
-
-
Weaver, J.1
Whitehead, T.R.2
Cotta, M.A.3
Valentine, P.C.4
Salyers, A.A.5
-
107
-
-
84906943565
-
Complete genome of a new Firmicutes species belonging to the dominant human colonic microbiota (Ruminococcus bicirculans) reveals two chromosomes and a selective capacity to utilize plant glucans
-
In press
-
Wegmann U, Louis P, Goesmann A, Henrissat B, Duncan SH, Flint HJ. 2013. Complete genome of a new Firmicutes species belonging to the dominant human colonic microbiota (Ruminococcus bicirculans) reveals two chromosomes and a selective capacity to utilize plant glucans. Environ. Microbiol. In press. doi: 10.1111/1462-2920.12217
-
(2013)
Environ. Microbiol.
-
-
Wegmann, U.1
Louis, P.2
Goesmann, A.3
Henrissat, B.4
Duncan, S.H.5
Flint, H.J.6
-
108
-
-
0022684738
-
Rumen holotrich ciliate protozoa
-
Williams AG. 1986. Rumen holotrich ciliate protozoa. Microbiol. Rev. 50:25-49
-
(1986)
Microbiol. Rev.
, vol.50
, pp. 25-49
-
-
Williams, A.G.1
-
110
-
-
63849263034
-
How the microbial world saved evolution from the scylla of molecular biology and the charybdis of the modern synthesis
-
Woese CR, Goldenfeld N. 2009. How the microbial world saved evolution from the scylla of molecular biology and the charybdis of the modern synthesis. Microbiol. Mol. Biol. Rev. 73:14-21
-
(2009)
Microbiol. Mol. Biol. Rev.
, vol.73
, pp. 14-21
-
-
Woese, C.R.1
Goldenfeld, N.2
-
111
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YY, et al. 2011. Linking long-term dietary patterns with gut microbial enterotypes. Science 334:105-8
-
(2011)
Science
, vol.334
, pp. 105-108
-
-
Wu, G.D.1
Chen, J.2
Hoffmann, C.3
Bittinger, K.4
Chen, Y.Y.5
-
112
-
-
85012846263
-
Multifunctional enzyme systems for plant cell wall degradation
-
ed. M Moo-Young, M Butler, C Webb, A Moreira, F Bai Amsterdam: Elsevier
-
Xu Q, Luo Y, Ding S-Y, Lamed R, Bayer EA, Himmel ME. 2011. Multifunctional enzyme systems for plant cell wall degradation. In Comprehensive Biotechnology, ed. M Moo-Young, M Butler, C Webb, A Moreira, F Bai, pp. 15-25. Amsterdam: Elsevier
-
(2011)
Comprehensive Biotechnology
, pp. 15-25
-
-
Xu, Q.1
Luo, Y.2
Ding, S.-Y.3
Lamed, R.4
Bayer, E.A.5
Himmel, M.E.6
-
113
-
-
2442419093
-
A novel family of carbohydratebinding modules identified with Ruminococcus albus proteins
-
Xu Q, MorrisonM, Nelson KE, Bayer EA, Atamna N, Lamed R. 2004. A novel family of carbohydratebinding modules identified with Ruminococcus albus proteins. FEBS Lett. 566:11-16
-
(2004)
FEBS Lett.
, vol.566
, pp. 11-16
-
-
Xu, Q.1
Morrison, M.2
Nelson, K.E.3
Bayer, E.A.4
Atamna, N.5
Lamed, R.6
-
114
-
-
73649087249
-
Biochemical and domain analyses of FSUAxe6B, a modular acetyl xylan esterase, identify a unique carbohydrate binding module in Fibrobacter succinogenes S85
-
Yoshida S,Mackie RI, Cann IK. 2010. Biochemical and domain analyses of FSUAxe6B, a modular acetyl xylan esterase, identify a unique carbohydrate binding module in Fibrobacter succinogenes S85. J. Bacteriol. 192:483-93
-
(2010)
J. Bacteriol.
, vol.192
, pp. 483-493
-
-
Yoshida, S.1
Mackie, R.I.2
Cann, I.K.3
-
116
-
-
84863990011
-
Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon
-
Ze X, Duncan SH, Louis P, Flint HJ. 2012. Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon. ISME J. 6:1535-43
-
(2012)
ISME J.
, vol.6
, pp. 1535-1543
-
-
Ze, X.1
Duncan, S.H.2
Louis, P.3
Flint, H.J.4
-
117
-
-
84877356167
-
Some are more equal than others: The role of "keystone" species in the degradation of recalcitrant substrates
-
Ze X, Le Mougen F, Duncan SH, Louis P, Flint HJ. 2013. Some are more equal than others: the role of "keystone" species in the degradation of recalcitrant substrates. Gut Microbes 4:236-40
-
(2013)
Gut Microbes
, vol.4
, pp. 236-240
-
-
Ze, X.1
Le Mougen, F.2
Duncan, S.H.3
Louis, P.4
Flint, H.J.5
|