Satellite tobacco mosaic virus refined to 1.4Å resolution

Acta Crystallographica Section D: Biological Crystallography

Volumn 70, Issue 9, 2014, Pages 2316-2330

  Larson, Steven B ^a   Day, John S ^a   Mcpherson, Alexander ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

icosahedral symmetry; ion pores; nucleic acid; virus structure

Indexed keywords

CHEMISTRY; MOLECULAR MODEL; PLANT LEAF; TOBACCO; TOBACCO MOSAIC VIRUS; VIROLOGY; WEIGHTLESSNESS; X RAY CRYSTALLOGRAPHY;

CRYSTALLOGRAPHY, X-RAY; MODELS, MOLECULAR; PLANT LEAVES; TOBACCO; TOBACCO MOSAIC VIRUS; WEIGHTLESSNESS;

EID: 84907009896     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S1399004714013789     Document Type: Article

References (33)

1. Ban, N., Larson, S. B. & McPherson, A. (1995). Virology, 214, 571-583.
2. Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N. & Bourne, P. E. (2000). Nucleic Acids Res. 28, 235-242.
3. Brünger, A. T. (1991). Annu. Rev. Phys. Chem. 42, 197-223.
4. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
5. Brünger, A. T., Kuriyan, J. & Karplus, M. (1987). Science, 235, 458-460.
6. Caspar, D. L. & Klug, A. (1962). Cold Spring Harb. Symp. Quant. Biol. 27, 1-24.
7. Day, J., Kuznetsov, Y. G., Larson, S. B., Greenwood, A. & McPherson, A. (2001). Biophys. J. 80, 2364-2371.
8. Day, J. & McPherson, A. (1992). Protein Sci. 1, 1254-1268.
9. DeLano, W. L. (2002). PyMOL. http://www.pymol.org.
10. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
11. Fraser, J. S., van den Bedem, H., Samelson, A. J., Lang, P. T., Holton, J. M., Echols, N. & Alber, T. (2011). Proc. Natl Acad. Sci. USA, 108, 16247-16252.
12. Koszelak, S., Dodds, J. A. & McPherson, A. (1989). J. Mol. Biol. 209, 323-325.
13. Lane, S. W., Dennis, C. A., Lane, C. L., Trinh, C. H., Rizkallah, P. J., Stockley, P. G. & Phillips, S. E. V. (2011). J. Mol. Biol. 413, 41-50.
14. Larson, S. B., Day, J., Greenwood, A. &McPherson, A. (1998). J. Mol. Biol. 277, 37-59.
15. Larson, S. B., Koszelak, S., Day, J., Greenwood, A., Dodds, J. A. & McPherson, A. (1993a). J. Mol. Biol. 231, 375-391.
16. Larson, S. B., Koszelak, S., Day, J., Greenwood, A., Dodds, J. A. & McPherson, A. (1993b). Nature (London), 361, 179-182.
17. Larson, S. B., Lucas, R.W. & McPherson, A. (2005). J. Mol. Biol. 346, 815-831.
18. Larson, S. B. & McPherson, A. (2001). Curr. Opin. Struct. Biol. 11, 59-65.
19. Makino, D. L., Larson, S. B. & McPherson, A. (2013). J. Struct. Biol. 181, 37-52.
20. McPherson, A. (1996). Crystallogr. Rev. 6, 157-308.
21. McPherson, A. (1999). Crystallization of Biological Macromolecules. Cold Spring Harbor Laboratory Press.
22. Mirkov, T. E., Mathews, D. M., Du Plessis, D. H. & Dodds, J. A. (1989). Virology, 170, 139-146.
23. Murshudov, G. N., Skubák, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F. & Vagin, A. A. (2011). Acta Cryst. D67, 355-367.
24. Pflugrath, J. W. (1999). Acta Cryst. D55, 1718-1725.
25. Schomaker, V. & Trueblood, K. N. (1968). Acta Cryst. B24, 63-76.
26. Seeman, N. C., Rosenberg, J. M. & Rich, A. (1976). Proc. Natl Acad. Sci. USA, 73, 804-808.
27. Sheldrick, G. M. (1976). SHELX-76. Program for Crystal Structure Determination. University of Cambridge.
28. Sheldrick, G. M. & Schneider, T. R. (1997). Methods Enzymol. 277, 319-343.
29. Ten Eyck, L. F. (1977). Acta Cryst. A33, 486-492.
30. Valverde, R. A. & Dodds, J. A. (1986). J. Gen. Virol. 67, 1875-1884.
31. Valverde, R. A. & Dodds, J. A. (1987). J. Gen. Virol. 68, 965-972.
32. Valverde, R. A., Heick, J. A. & Dodds, J. A. (1991). Phytopathology, 81, 99-104.
33. Xuong, N. H., Nielsen, C., Hamlin, R. & Anderson, D. (1985). J. Appl. Cryst. 18, 342-350.