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Volumn 47, Issue 9, 2014, Pages 811-817

Expression analysis of miRNA and target mRNAs in esophageal cancer

Author keywords

Esophageal adenocarcinoma; Esophageal squamous cell carcinoma; Gene ontology; MiRNA expression network; Pathway

Indexed keywords

MESSENGER RNA; MICRORNA; MICRORNA 202; MICRORNA 203; MICRORNA 205; MICRORNA 21; MICRORNA 223; MICRORNA 375; UNCLASSIFIED DRUG;

EID: 84906490456     PISSN: 0100879X     EISSN: 1414431X     Source Type: Journal    
DOI: 10.1590/1414-431X20143906     Document Type: Article
Times cited : (24)

References (24)
  • 1
    • 84873197641 scopus 로고    scopus 로고
    • Oesophageal carcinoma
    • doi: 10.1016/S0140-6736(12)60643-6
    • Pennathur A, Gibson MK, Jobe BA, Luketich J.D. Oesophageal carcinoma. Lancet 2013; 381: 400-412, doi: 10.1016/S0140-6736(12)60643-6.
    • (2013) Lancet , vol.381 , pp. 400-412
    • Pennathur, A.1    Gibson, M.K.2    Jobe, B.A.3    Luketich, J.D.4
  • 2
    • 33645294070 scopus 로고    scopus 로고
    • Oncomirs-microRNAs with a role in cancer
    • doi: 10.1038/nrc1840
    • Esquela-Kerscher A, Slack F.J. Oncomirs-microRNAs with a role in cancer. Nat Rev Cancer 2006; 6: 259-269, doi: 10.1038/nrc1840.
    • (2006) Nat Rev Cancer , vol.6 , pp. 259-269
    • Esquela-Kerscher, A.1    Slack, F.J.2
  • 3
    • 67650664984 scopus 로고    scopus 로고
    • Expression profiling of micro-RNAs in human esophageal squamous cell carcinoma using RTPCR
    • doi: 10.1007/s00795-009-0443-1
    • Ogawa R, Ishiguro H, Kuwabara Y, Kimura M, Mitsui A, Katada T, et al. Expression profiling of micro-RNAs in human esophageal squamous cell carcinoma using RTPCR. Med Mol Morphol 2009; 42: 102-109, doi: 10.1007/s00795-009-0443-1.
    • (2009) Med Mol Morphol , vol.42 , pp. 102-109
    • Ogawa, R.1    Ishiguro, H.2    Kuwabara, Y.3    Kimura, M.4    Mitsui, A.5    Katada, T.6
  • 4
    • 25144498379 scopus 로고    scopus 로고
    • A human protein-protein interaction network: A resource for annotating the proteome
    • doi: 10.1016/j.cell.2005.08.029
    • Stelzl U, Worm U, Lalowski M, Haenig C, Brembeck FH, Goehler H, et al. A human protein-protein interaction network: a resource for annotating the proteome. Cell 2005; 122: 957-968, doi: 10.1016/j.cell.2005.08.029.
    • (2005) Cell , vol.122 , pp. 957-968
    • Stelzl, U.1    Worm, U.2    Lalowski, M.3    Haenig, C.4    Brembeck, F.H.5    Goehler, H.6
  • 5
    • 0142121516 scopus 로고    scopus 로고
    • Exploration, normalization, and summaries of high density oligonucleotide array probe level data
    • doi: 10.1093/biostatistics/4.2.249
    • Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, et al. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 2003; 4: 249-264, doi: 10.1093/biostatistics/4.2.249.
    • (2003) Biostatistics , vol.4 , pp. 249-264
    • Irizarry, R.A.1    Hobbs, B.2    Collin, F.3    Beazer-Barclay, Y.D.4    Antonellis, K.J.5    Scherf, U.6
  • 6
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J Royal Stat Soc Series B (Methodological) 1995; 57: 289-300.
    • (1995) J Royal Stat Soc Series B (Methodological) , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 7
    • 18744369640 scopus 로고    scopus 로고
    • Use of within-array replicate spots for assessing differential expression in microarray experiments
    • doi: 10.1093/bioinformatics/bti270
    • Smyth GK, Michaud J, Scott H.S. Use of within-array replicate spots for assessing differential expression in microarray experiments. Bioinformatics 2005; 21: 2067-2075, doi: 10.1093/bioinformatics/bti270.
    • (2005) Bioinformatics , vol.21 , pp. 2067-2075
    • Smyth, G.K.1    Michaud, J.2    Scott, H.S.3
  • 8
    • 77957813589 scopus 로고    scopus 로고
    • DCGL: An R package for identifying differentially coexpressed genes and links from gene expression microarray data
    • doi: 10.1093/bioinformatics/btq471
    • Liu BH, Yu H, Tu K, Li C, Li YX, Li Y.Y. DCGL: an R package for identifying differentially coexpressed genes and links from gene expression microarray data. Bioinformatics 2010; 26: 2637-2638, doi: 10.1093/bioinformatics/btq471.
    • (2010) Bioinformatics , vol.26 , pp. 2637-2638
    • Liu, B.H.1    Yu, H.2    Tu, K.3    Li, C.4    Li, Y.X.5    Li, Y.Y.6
  • 9
    • 38849145861 scopus 로고    scopus 로고
    • Prediction of both conserved and nonconserved microRNA targets in animals
    • doi: 10.1093/bioinformatics/btm595
    • Wang X, El Naqa I. Prediction of both conserved and nonconserved microRNA targets in animals. Bioinformatics 2008; 24: 325-332, doi: 10.1093/bioinformatics/btm595.
    • (2008) Bioinformatics , vol.24 , pp. 325-332
    • Wang, X.1    El Naqa, I.2
  • 10
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto encyclopedia of genes and genomes
    • doi: 10.1093/nar/28.1.27
    • Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res 2000; 28: 27-30, doi: 10.1093/nar/28.1.27.
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 11
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
    • doi: 10.1038/75556
    • Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 2000; 25: 25-29, doi: 10.1038/75556.
    • (2000) Nat Genet , vol.25 , pp. 25-29
    • Ashburner, M.1    Ball, C.A.2    Blake, J.A.3    Botstein, D.4    Butler, H.5    Cherry, J.M.6
  • 12
    • 84878407662 scopus 로고    scopus 로고
    • Deciphering the unique microRNA signature in human esophageal adenocarcinoma
    • doi: 10.1371/journal.pone.0064463
    • Saad R, Chen Z, Zhu S, Jia P, Zhao Z, Washington MK, et al. Deciphering the unique microRNA signature in human esophageal adenocarcinoma. PLoS One 2013; 8: e64463, doi: 10.1371/journal.pone.0064463.
    • (2013) PLoS One , vol.8
    • Saad, R.1    Chen, Z.2    Zhu, S.3    Jia, P.4    Zhao, Z.5    Washington, M.K.6
  • 13
    • 84877308966 scopus 로고    scopus 로고
    • MicroRNA expression signatures during malignant progression from Barrett's esophagus to esophageal adenocarcinoma
    • doi: 10.1158/1940-6207.CAPR-12-0276
    • Wu X, Ajani JA, Gu J, Chang DW, Tan W, Hildebrandt MA, et al. MicroRNA expression signatures during malignant progression from Barrett's esophagus to esophageal adenocarcinoma. Cancer Prev Res 2013; 6: 196-205, doi: 10.1158/1940-6207.CAPR-12-0276.
    • (2013) Cancer Prev Res , vol.6 , pp. 196-205
    • Wu, X.1    Ajani, J.A.2    Gu, J.3    Chang, D.W.4    Tan, W.5    Hildebrandt, M.A.6
  • 14
    • 23844555119 scopus 로고    scopus 로고
    • MicroRNA gene expression deregulation in human breast cancer
    • doi: 10.1158/0008-5472.CAN-05-1783
    • Iorio MV, Ferracin M, Liu CG, Veronese A, Spizzo R, Sabbioni S, et al. MicroRNA gene expression deregulation in human breast cancer. Cancer Res 2005; 65: 7065-7070, doi: 10.1158/0008-5472.CAN-05-1783.
    • (2005) Cancer Res , vol.65 , pp. 7065-7070
    • Iorio, M.V.1    Ferracin, M.2    Liu, C.G.3    Veronese, A.4    Spizzo, R.5    Sabbioni, S.6
  • 15
    • 77949262341 scopus 로고    scopus 로고
    • Increased expression of miR-421 in human gastric carcinoma and its clinical association
    • doi: 10.1007/s00535-009-0135-6
    • Jiang Z, Guo J, Xiao B, Miao Y, Huang R, Li D, et al. Increased expression of miR-421 in human gastric carcinoma and its clinical association. J Gastroenterol 2010; 45: 17-23, doi: 10.1007/s00535-009-0135-6.
    • (2010) J Gastroenterol , vol.45 , pp. 17-23
    • Jiang, Z.1    Guo, J.2    Xiao, B.3    Miao, Y.4    Huang, R.5    Li, D.6
  • 16
    • 69249123785 scopus 로고    scopus 로고
    • MicroRNA-21 induces cell proliferation and invasion in esophageal squamous cell carcinoma
    • Mori Y, Ishiguro H, Kuwabara Y, Kimura M, Mitsui A, Ogawa R, et al. MicroRNA-21 induces cell proliferation and invasion in esophageal squamous cell carcinoma. Mol Med Rep 2009; 2: 235-239.
    • (2009) Mol Med Rep , vol.2 , pp. 235-239
    • Mori, Y.1    Ishiguro, H.2    Kuwabara, Y.3    Kimura, M.4    Mitsui, A.5    Ogawa, R.6
  • 17
    • 84883818845 scopus 로고    scopus 로고
    • Expression, tissue distribution and function of miR-21 in esophageal squamous cell carcinoma
    • doi: 10.1371/journal.pone.0073009
    • Nouraee N, Van Roosbroeck K, Vasei M, Semnani S, Samaei NM, Naghshvar F, et al. Expression, tissue distribution and function of miR-21 in esophageal squamous cell carcinoma. PLoS One 2013; 8: e73009, doi: 10.1371/journal.pone.0073009.
    • (2013) PLoS One , vol.8
    • Nouraee, N.1    van Roosbroeck, K.2    Vasei, M.3    Semnani, S.4    Samaei, N.M.5    Naghshvar, F.6
  • 18
    • 84855346886 scopus 로고    scopus 로고
    • Overexpression of microRNA-223 regulates the ubiquitin ligase FBXW7 in oesophageal squamous cell carcinoma
    • doi: 10.1038/bjc.2011.509
    • Kurashige J, Watanabe M, Iwatsuki M, Kinoshita K, Saito S, Hiyoshi Y, et al. Overexpression of microRNA-223 regulates the ubiquitin ligase FBXW7 in oesophageal squamous cell carcinoma. Br J Cancer 2012; 106: 182-188, doi: 10.1038/bjc.2011.509.
    • (2012) Br J Cancer , vol.106 , pp. 182-188
    • Kurashige, J.1    Watanabe, M.2    Iwatsuki, M.3    Kinoshita, K.4    Saito, S.5    Hiyoshi, Y.6
  • 19
    • 78649887520 scopus 로고    scopus 로고
    • Expression profile of microRNAs in serum: A fingerprint for esophageal squamous cell carcinoma
    • doi: 10.1373/clinchem.2010.147553
    • Zhang C, Wang C, Chen X, Yang C, Li K, Wang J, et al. Expression profile of microRNAs in serum: a fingerprint for esophageal squamous cell carcinoma. Clin Chem 2010; 56: 1871-1879, doi: 10.1373/clinchem.2010.147553.
    • (2010) Clin Chem , vol.56 , pp. 1871-1879
    • Zhang, C.1    Wang, C.2    Chen, X.3    Yang, C.4    Li, K.5    Wang, J.6
  • 20
    • 84864987437 scopus 로고    scopus 로고
    • Identification of novel molecular targets regulated by tumor suppressive miR-375 induced by histone acetylation in esophageal squamous cell carcinoma
    • Isozaki Y, Hoshino I, Nohata N, Kinoshita T, Akutsu Y, Hanari N, et al. Identification of novel molecular targets regulated by tumor suppressive miR-375 induced by histone acetylation in esophageal squamous cell carcinoma. Int J Oncol 2012; 41: 985-994.
    • (2012) Int J Oncol , vol.41 , pp. 985-994
    • Isozaki, Y.1    Hoshino, I.2    Nohata, N.3    Kinoshita, T.4    Akutsu, Y.5    Hanari, N.6
  • 21
    • 84861437376 scopus 로고    scopus 로고
    • Prognostic impact of circulating miR-21 and miR-375 in plasma of patients with esophageal squamous cell carcinoma
    • doi: 10.1517/14712598.2012.681373
    • Komatsu S, Ichikawa D, Takeshita H, Konishi H, Nagata H, Hirajima S, et al. Prognostic impact of circulating miR-21 and miR-375 in plasma of patients with esophageal squamous cell carcinoma. Expert Opin Biol Ther 2012; 12 (Suppl 1): S53-S59, doi: 10.1517/14712598.2012.681373.
    • (2012) Expert Opin Biol Ther , vol.12 , Issue.SUPPL. 1
    • Komatsu, S.1    Ichikawa, D.2    Takeshita, H.3    Konishi, H.4    Nagata, H.5    Hirajima, S.6
  • 23
    • 84875985462 scopus 로고    scopus 로고
    • Loss of TGF-beta adaptor beta2SP activates notch signaling and SOX9 expression in esophageal adenocarcinoma
    • doi: 10.1158/0008-5472.CAN-12-1962
    • Song S, Maru DM, Ajani JA, Chan CH, Honjo S, Lin HK, et al. Loss of TGF-beta adaptor beta2SP activates notch signaling and SOX9 expression in esophageal adenocarcinoma. Cancer Res 2013; 73: 2159-2169, doi: 10.1158/0008-5472.CAN-12-1962.
    • (2013) Cancer Res , vol.73 , pp. 2159-2169
    • Song, S.1    Maru, D.M.2    Ajani, J.A.3    Chan, C.H.4    Honjo, S.5    Lin, H.K.6
  • 24
    • 84860733964 scopus 로고    scopus 로고
    • JAK/STAT signal pathway activation promotes progression and survival of human oesophageal squamous cell carcinoma
    • doi: 10.1007/s12094-012-0774-6
    • You Z, Xu D, Ji J, Guo W, Zhu W, He J. JAK/STAT signal pathway activation promotes progression and survival of human oesophageal squamous cell carcinoma. Clin Transl Oncol 2012; 14: 143-149, doi: 10.1007/s12094-012-0774-6.
    • (2012) Clin Transl Oncol , vol.14 , pp. 143-149
    • You, Z.1    Xu, D.2    Ji, J.3    Guo, W.4    Zhu, W.5    He, J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.