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Volumn 106, Issue 3, 2014, Pages 527-533

Lacinutrix jangbogonensis sp. nov., a psychrophilic bacterium isolated from Antarctic marine sediment and emended description of the genus Lacinutrix

Author keywords

Lacinutrix jangbogonensis sp. nov.; Polyphasic taxonomy

Indexed keywords

AMINOLIPID; AMINOPHOSPHOLIPID; FATTY ACID; GENOMIC DNA; NUCLEOTIDE; PHOSPHATIDYLETHANOLAMINE; PHOSPHOLIPID; RNA 16S; UNCLASSIFIED DRUG;

EID: 84905563334     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-014-0221-5     Document Type: Article
Times cited : (24)

References (24)
  • 1
    • 77952891913 scopus 로고    scopus 로고
    • Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison
    • Auch AF, von Jan M, Klenk HP, Göker M (2010) Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison. Stand Genomic Sci 2:117-134
    • (2010) Stand Genomic Sci , vol.2 , pp. 117-134
    • Auch, A.F.1    Von Jan, M.2    Klenk, H.P.3    Göker, M.4
  • 3
    • 22544462274 scopus 로고    scopus 로고
    • Novel members of the family Flavobacteriaceae from Antarctic maritime habitats including Subsaximicrobium wynnwilliamsii gen. nov., sp. nov., Subsaximicrobium saxinquilinus sp. nov., Subsaxibacter broadyi gen. nov., sp. nov., Lacinutrix copepodicola gen. nov., sp. nov., and novel species of the genera Bizionia, Gelidibacter and Gillisia
    • DOI 10.1099/ijs.0.63527-0
    • Bowman JP, Nichols DS (2005) Novel members of the family Flavobacteriaceae from Antarctic maritime habitats including Subsaximicrobium wynnwilliamsii gen. nov., sp. nov., Subsaximicrobium saxinquilinus sp. nov., Subsaxibacter broadyi gen. nov., sp. nov., Lacinutrix copepodicola gen. nov., sp. nov., and novel species of the genera Bizionia, Gelidibacter and Gillisia. Int J Syst Evol Microbiol 55:1471-1486 (Pubitemid 41015591)
    • (2005) International Journal of Systematic and Evolutionary Microbiology , vol.55 , Issue.4 , pp. 1471-1486
    • Bowman, J.P.1    Nichols, D.S.2
  • 4
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun J, Lee J-H, Jung Y, Kim M, Kim S, Kim BK, Lim Y-W (2007) EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57:259-2261
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 259-2261
    • Chun, J.1    Lee, J.-H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.-W.7
  • 5
    • 0019490792 scopus 로고
    • Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implications
    • Collins MD, Jones D (1981) Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication. Microbiol Rev 45:316-354 (Pubitemid 11032202)
    • (1981) Microbiological Reviews , vol.45 , Issue.2 , pp. 316-354
    • Collins, M.D.1    Jones, D.2
  • 7
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch WM (1971) Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20:406-416
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 10
    • 0242578620 scopus 로고    scopus 로고
    • A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
    • DOI 10.1080/10635150390235520
    • Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696-704 (Pubitemid 37365050)
    • (2003) Systematic Biology , vol.52 , Issue.5 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 12
    • 84864393402 scopus 로고    scopus 로고
    • Polar and alpine microbial collection (PAMC): A culture collection dedicated to polar and alpine microorganisms
    • Lee Y, Kim G, Jung Y-J, Choe C-D, Yim J, Lee H, Hong S (2012) Polar and alpine microbial collection (PAMC): a culture collection dedicated to polar and alpine microorganisms. Polar Biol 35:1433-1438
    • (2012) Polar Biol , vol.35 , pp. 1433-1438
    • Lee, Y.1    Kim, G.2    Jung, Y.-J.3    Choe, C.-D.4    Yim, J.5    Lee, H.6    Hong, S.7
  • 13
    • 0021182575 scopus 로고
    • An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids
    • Minnikin DE, O'Donnell AG, Goodfellow M, Alderson G, Athalye M, Schaal A, Parlett JH (1984) An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2:233-241 (Pubitemid 14058168)
    • (1984) Journal of Microbiological Methods , vol.2 , Issue.5 , pp. 233-241
    • Minnikin, D.E.1    O'Donnell, A.G.2    Goodfellow, M.3
  • 14
    • 58949086252 scopus 로고    scopus 로고
    • Lacinutrix algicola sp. nov. and Lacinutrix mariniflava sp. nov., two novel marine alga-associated bacteria and emended description of the genus Lacinutrix
    • Nedashkovskaya OI, Kwon KK, Yang S-H, Lee H-S, Chung KH, Kim S-J (2008) Lacinutrix algicola sp. nov. and Lacinutrix mariniflava sp. nov., two novel marine alga-associated bacteria and emended description of the genus Lacinutrix. Int J Syst Evol Microbiol 58:2694-2698
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 2694-2698
    • Nedashkovskaya, O.I.1    Kwon, K.K.2    Yang, S.-H.3    Lee, H.-S.4    Chung, K.H.5    Kim, S.-J.6
  • 15
    • 73149098333 scopus 로고    scopus 로고
    • Shifting the genomic gold standard for the prokaryotic species definition
    • Richter M, Rosselló-Móra R (2009) Shifting the genomic gold standard for the prokaryotic species definition. Proc Natl Acad Sci USA 106:19126-19131
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 19126-19131
    • Richter, M.1    Rosselló-Móra, R.2
  • 16
    • 0035174578 scopus 로고    scopus 로고
    • The species concept for prokaryotes
    • DOI 10.1016/S0168-6445(00)00040-1, PII S0168644500000401
    • Rosselló-Mora R, Amann R (2001) The species concept for prokaryotes. FEMS Microbiol Rev 25:39-67 (Pubitemid 32057196)
    • (2001) FEMS Microbiology Reviews , vol.25 , Issue.1 , pp. 39-67
    • Rossello-Mora, R.1    Amann, R.2
  • 17
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 18
    • 0141810217 scopus 로고
    • Identification of bacteria by gas chromatography of cellular fatty acids
    • Sasser M (1990) Identification of bacteria by gas chromatography of cellular fatty acids. USFCC News Lett 20:16
    • (1990) USFCC News Lett , vol.20 , pp. 16
    • Sasser, M.1
  • 19
    • 0000612080 scopus 로고
    • General characterization
    • Gebhardt P, Murray RGE, Wood WA, Krieg NR (eds) American Society for Microbiology, Washington, DC
    • Smibert RM, Krieg NR (1994) General characterization. In: Gebhardt P, Murray RGE, Wood WA, Krieg NR (eds) Methods for general and molecular bacteriology. American Society for Microbiology, Washington, DC, pp 607-654
    • (1994) Methods for General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 20
    • 84874026870 scopus 로고    scopus 로고
    • Lacinutrix himadriensis sp. nov., a psychrophilic bacterium isolated from a marine sediment, and emended description of the genus Lacinutrix
    • Srinivas TNR, Prasad S, Manasa P, Sailaja B, Begum Z, Shivaji S (2013) Lacinutrix himadriensis sp. nov., a psychrophilic bacterium isolated from a marine sediment, and emended description of the genus Lacinutrix. Int J Syst Evol Microbiol 63:729-734
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 729-734
    • Srinivas, T.N.R.1    Prasad, S.2    Manasa, P.3    Sailaja, B.4    Begum, Z.5    Shivaji, S.6
  • 22
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reversed-phase high-performance liquid chromatography
    • DOI 10.1016/0378-1097(84)90059-4
    • Tamaoka J, Komagata K (1984) Determination of DNA base composition by reversed-phase high performance liquid chromatography. FEMS Microbiol Lett 25:125-128 (Pubitemid 15217312)
    • (1984) FEMS Microbiology Letters , vol.25 , Issue.1 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 23
    • 84860735367 scopus 로고    scopus 로고
    • Flavivirga jejuensis gen. nov., sp. nov., and Flavivirga amylovorans sp. nov., new members of the family Flavobacteriaceae isolated from seawater, and emended descriptions of the genera Psychroserpens and Lacinutrix
    • Yi H, Cho J-C, Chun J (2012) Flavivirga jejuensis gen. nov., sp. nov., and Flavivirga amylovorans sp. nov., new members of the family Flavobacteriaceae isolated from seawater, and emended descriptions of the genera Psychroserpens and Lacinutrix. Int J Syst Evol Microbiol 62:1061-1068
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 1061-1068
    • Yi, H.1    Cho, J.-C.2    Chun, J.3
  • 24
    • 84891861059 scopus 로고    scopus 로고
    • Diversity of both the cultivable protease-producing bacteria and bacterial extracellular proteases in the coastal sediments of King George Island, Antarctica
    • Zhou M-Y, Wang G-L, Li D, Zhao D-L, Qin Q-L, Chen X-L, Chen B, Zhou B-C, Zhang X-Y, Zhang Y-Z (2013) Diversity of both the cultivable protease-producing bacteria and bacterial extracellular proteases in the coastal sediments of King George Island, Antarctica. PLoS ONE 8:e79668
    • (2013) PLoS ONE , vol.8
    • Zhou, M.-Y.1    Wang, G.-L.2    Li, D.3    Zhao, D.-L.4    Qin, Q.-L.5    Chen, X.-L.6    Chen, B.7    Zhou, B.-C.8    Zhang, X.-Y.9    Zhang, Y.-Z.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.