Comparison of the web tools ARG-ANNOT and ResFinder for detection of resistance genes in Bacteria

Antimicrobial Agents and Chemotherapy

Volumn 58, Issue 8, 2014, Pages 4986-

  Zankari, Ea ^a  

^a TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL GENOME; BIOLOGY; COMPUTER PROGRAM; GENETICS; PROCEDURES;

COMPUTATIONAL BIOLOGY; GENOME, BACTERIAL; SOFTWARE;

EID: 84905372708     PISSN: 00664804     EISSN: 10986596     Source Type: Journal    
DOI: 10.1128/AAC.02620-14     Document Type: Letter

References (3)

1. Gupta SK, Padmanabhan BR, Diene SM, Lopez-Rojas R, Kempf M, Landraun L, Rolain JM. 2014. ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes. Antimicrob. Agents Chemother. 58:212-220. http://dx.doi.org/10.1128/AAC.01310-13.
2. Zankari E, Hasman H, Cosentino S, Vestergaard M, Rasmussen S, Lund O, Aarestrup FM, Larsen MV. 2012. Identification of acquired antimicrobial resistance genes. J. Antimicrob. Chemother. 67:2640-2644. http://dx.doi.org/10. 1093/jac/dks261.
3. Zankari E, Hasman H, Kaas RS, Seyfarth AM, Agerso Y, Lund O, Larsen MV, Aarestrup FM. 2013. Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing. J. Antimicrob. Chemother. 68:771-777. http://dx.doi.org/10.1093/jac/ dks496.