-
1
-
-
0032612239
-
Identifying and quantitating FAD and FMN in simple and in Iron-Sulfur-containing flavoproteins
-
eds S. K. Chapman and G. A. Reid (New Jersey: Humana Press)
-
Aliverti, A., Curti, B., and Vanoni, M. (1999). "Identifying and quantitating FAD and FMN in simple and in Iron-Sulfur-containing flavoproteins," in Flavoprotein Protocols, eds S. K. Chapman and G. A. Reid (New Jersey: Humana Press), 9-23.
-
(1999)
Flavoprotein Protocols
, pp. 9-23
-
-
Aliverti, A.1
Curti, B.2
Vanoni, M.3
-
2
-
-
0032578852
-
Overproduction of the Bradyrhizobium japonicum c-type cytochrome subunits of the cbb3 oxidase in Escherichia coli
-
doi: 10.1006/bbrc.1998.9549
-
Arslan, E., Schulz, H., Zufferey, R., Künzler, P., and Thöny-Meyer, L. (1998). Overproduction of the Bradyrhizobium japonicum c-type cytochrome subunits of the cbb3 oxidase in Escherichia coli. Biochem. Biophys. Res. Commun. 251, 744-747. doi: 10.1006/bbrc.1998.9549
-
(1998)
Biochem. Biophys. Res. Commun.
, vol.251
, pp. 744-747
-
-
Arslan, E.1
Schulz, H.2
Zufferey, R.3
Künzler, P.4
Thöny-Meyer, L.5
-
3
-
-
70350383656
-
Electrochemical measurement of electron transfer kinetics by Shewanella oneidensis MR-1
-
doi: 10.1074/jbc.M109.043455
-
Baron, D., LaBelle, E., Coursolle, D., Gralnick, J. A., and Bond, D. R. (2009). Electrochemical measurement of electron transfer kinetics by Shewanella oneidensis MR-1. J. Biol. Chem. 284, 28865-28873. doi: 10.1074/jbc.M109.043455
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 28865-28873
-
-
Baron, D.1
LaBelle, E.2
Coursolle, D.3
Gralnick, J.A.4
Bond, D.R.5
-
4
-
-
33845667977
-
Both sulfate-reducing bacteria and Enterobacteriaceae take part in marine biocorrosion of carbon steel
-
doi: 10.1111/j.1365-2672.2006.03053.x
-
Bermont-Bouis, D., Janvier, M., Grimont, P. A. D., Dupont, I., and Vallaeys, T. (2007). Both sulfate-reducing bacteria and Enterobacteriaceae take part in marine biocorrosion of carbon steel. J. Appl. Microbiol. 102, 161-168. doi: 10.1111/j.1365-2672.2006.03053.x
-
(2007)
J. Appl. Microbiol.
, vol.102
, pp. 161-168
-
-
Bermont-Bouis, D.1
Janvier, M.2
Grimont, P.A.D.3
Dupont, I.4
Vallaeys, T.5
-
5
-
-
77953285756
-
The effect of detergents and lipids on the properties of the outer-membrane protein OmcA from Shewanella oneidensis
-
doi: 10.1007/s00775-010-0643-0
-
Bodemer, G. J., and Antholine, W. E. (2010). The effect of detergents and lipids on the properties of the outer-membrane protein OmcA from Shewanella oneidensis. J. Biol. Inorg. Chem. 15, 749-758. doi: 10.1007/s00775-010-0643-0
-
(2010)
J. Biol. Inorg. Chem.
, vol.15
, pp. 749-758
-
-
Bodemer, G.J.1
Antholine, W.E.2
-
6
-
-
35949000517
-
Current production and metal oxide reduction by Shewanella oneidensis MR-1 Wild Type and Mutants
-
doi: 10.1128/AEM.01087-07
-
Bretschger, O., Obraztsova, A., Sturm, C. A., Chang, I. S., Gorby, Y. A., Reed, S. B., et al. (2007). Current production and metal oxide reduction by Shewanella oneidensis MR-1 Wild Type and Mutants. Appl. Environ. Microbiol. 73, 7003-7012. doi: 10.1128/AEM.01087-07
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 7003-7012
-
-
Bretschger, O.1
Obraztsova, A.2
Sturm, C.A.3
Chang, I.S.4
Gorby, Y.A.5
Reed, S.B.6
-
7
-
-
77951130441
-
Involvement and specificity of Shewanella oneidensis outer membrane cytochromes in the reduction of soluble and solid-phase terminal electron acceptors
-
doi: 10.1111/j.1574-6968.2010.01949.x
-
Bücking, C., Popp, F., Kerzenmacher, S., and Gescher, J. (2010). Involvement and specificity of Shewanella oneidensis outer membrane cytochromes in the reduction of soluble and solid-phase terminal electron acceptors. FEMS Microbiol. Lett. 306, 144-151. doi: 10.1111/j.1574-6968.2010.01949.x
-
(2010)
FEMS Microbiol. Lett.
, vol.306
, pp. 144-151
-
-
Bücking, C.1
Popp, F.2
Kerzenmacher, S.3
Gescher, J.4
-
8
-
-
79959370190
-
Structure of a bacterial cell surface decaheme electron conduit
-
doi: 10.1073/pnas.1017200108/-/DC
-
Clarke, T. A., Edwards, M. J., Gates, A. J., Hall, A., White, G. F., Bradley, J., et al. (2011). Structure of a bacterial cell surface decaheme electron conduit. Proc. Natl. Acad. Sci. U.S.A. 108, 9384-9389. doi: 10.1073/pnas.1017200108/-/DC
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 9384-9389
-
-
Clarke, T.A.1
Edwards, M.J.2
Gates, A.J.3
Hall, A.4
White, G.F.5
Bradley, J.6
-
9
-
-
73649141295
-
The Mtr respiratory pathway is essential for reducing flavins and electrodes in Shewanella oneidensis
-
doi: 10.1128/JB.00925-09
-
Coursolle, D., Baron, D. B., Bond, D. R., and Gralnick, J. A. (2010). The Mtr respiratory pathway is essential for reducing flavins and electrodes in Shewanella oneidensis. J. Bacteriol. 192, 467-474. doi: 10.1128/JB.00925-09
-
(2010)
J. Bacteriol.
, vol.192
, pp. 467-474
-
-
Coursolle, D.1
Baron, D.B.2
Bond, D.R.3
Gralnick, J.A.4
-
10
-
-
77955382673
-
Modularity of the Mtr respiratory pathway of Shewanella oneidensis strain MR-1
-
doi: 10.1111/j.1365-2958.2010.07266.x
-
Coursolle, D., and Gralnick, J. A. (2010). Modularity of the Mtr respiratory pathway of Shewanella oneidensis strain MR-1. Mol. Microbiol. 77, 995-1008. doi: 10.1111/j.1365-2958.2010.07266.x
-
(2010)
Mol. Microbiol.
, vol.77
, pp. 995-1008
-
-
Coursolle, D.1
Gralnick, J.A.2
-
11
-
-
84870165628
-
Reconstruction of extracellular respiratory pathways for iron (III) reduction in Shewanella oneidensis strain MR-1
-
doi: 10.3389/fmicb.2012.00056
-
Coursolle, D., and Gralnick, J. A. (2012). Reconstruction of extracellular respiratory pathways for iron (III) reduction in Shewanella oneidensis strain MR-1. Gene 3, 1-11. doi: 10.3389/fmicb.2012.00056
-
(2012)
Gene
, vol.3
, pp. 1-11
-
-
Coursolle, D.1
Gralnick, J.A.2
-
12
-
-
84896689258
-
Evidence for interaction between the triheme cytochrome PpcA from Geobacter sulfurreducens and anthrahydroquinone-2,6-disulfonate, an analog of the redox active components of humic substances
-
doi: 10.1016/j.bbabio.2014.02.004
-
Dantas, J. M., Morgado, L., Catarino, T., Kokhan, O., Raj Pokkuluri, P., and Salgueiro, C. A. (2014). Evidence for interaction between the triheme cytochrome PpcA from Geobacter sulfurreducens and anthrahydroquinone-2,6-disulfonate, an analog of the redox active components of humic substances. Biochim. Biophys. Acta 1837, 750-760. doi: 10.1016/j.bbabio.2014.02.004
-
(2014)
Biochim. Biophys. Acta
, vol.1837
, pp. 750-760
-
-
Dantas, J.M.1
Morgado, L.2
Catarino, T.3
Kokhan, O.4
Raj Pokkuluri, P.5
Salgueiro, C.A.6
-
13
-
-
0003836971
-
Data for Biochemical Research
-
3rd Edn. New York, NY: Oxford University Press. doi: 10.1016/0307-4412(87)90110-5.
-
Dawson, R. (1987). Data for Biochemical Research, 3rd Edn. New York, NY: Oxford University Press. doi: 10.1016/0307-4412(87)90110-5
-
(1987)
-
-
Dawson, R.1
-
14
-
-
19544378555
-
An NMR-based docking model for the physiological transient complex between cytochrome f and cytochrome c6
-
doi: 10.1016/j.febslet.2005.04.031
-
Díaz-Moreno, I., Díaz-Quintana, A., Ubbink, M., and De la Rosa, M. A. (2005). An NMR-based docking model for the physiological transient complex between cytochrome f and cytochrome c6. FEBS Lett. 579, 2891-2896. doi: 10.1016/j.febslet.2005.04.031
-
(2005)
FEBS Lett.
, vol.579
, pp. 2891-2896
-
-
Díaz-Moreno, I.1
Díaz-Quintana, A.2
Ubbink, M.3
De la Rosa, M.A.4
-
15
-
-
0015207696
-
The acceptor specificity of flavins and flavoproteins
-
doi: 10.1016/0005-2728(71)90092-2
-
Dixon, M. (1971). The acceptor specificity of flavins and flavoproteins. I. Techniques for anaerobic spectrophotometry. Biochim. Biophys. Acta 226, 241-258. doi: 10.1016/0005-2728(71)90092-2
-
(1971)
I. Techniques for anaerobic spectrophotometry. Biochim. Biophys. Acta
, vol.226
, pp. 241-258
-
-
Dixon, M.1
-
16
-
-
0036198636
-
Microbial iron respiration can protect steel from corrosion
-
doi: 10.1128/AEM.68.3.1440-1445.2002
-
Dubiel, M., Hsu, C. H., Chien, C. C., Mansfeld, F., and Newman, D. K. (2002). Microbial iron respiration can protect steel from corrosion. Appl. Environ. Microbiol. 68, 1440-1445. doi: 10.1128/AEM.68.3.1440-1445.2002
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 1440-1445
-
-
Dubiel, M.1
Hsu, C.H.2
Chien, C.C.3
Mansfeld, F.4
Newman, D.K.5
-
17
-
-
84870218813
-
Analysis of structural MtrC models based on homology with the crystal structure of MtrF
-
doi: 10.1042/BST20120132
-
Edwards, M. J., Fredrickson, J. K., Zachara, J., Richardson, D. J., and Clarke, T. A. (2012a). Analysis of structural MtrC models based on homology with the crystal structure of MtrF. Biochem. Soc. Trans. 40, 1181-1185. doi: 10.1042/BST20120132
-
(2012)
Biochem. Soc. Trans.
, vol.40
, pp. 1181-1185
-
-
Edwards, M.J.1
Fredrickson, J.K.2
Zachara, J.3
Richardson, D.J.4
Clarke, T.A.5
-
18
-
-
84863521885
-
The crystal structure of the extracellular 11-heme cytochrome UndA reveals a conserved 10-heme motif and defined binding site for soluble iron chelates
-
doi: 10.1016/j.str.2012.04.016
-
Edwards, M. J., Hall, A., Shi, L., Fredrickson, J. K., Zachara, J. M., Butt, J. N., et al. (2012b). The crystal structure of the extracellular 11-heme cytochrome UndA reveals a conserved 10-heme motif and defined binding site for soluble iron chelates. Structure 20, 1275-1284. doi: 10.1016/j.str.2012.04.016
-
(2012)
Structure
, vol.20
, pp. 1275-1284
-
-
Edwards, M.J.1
Hall, A.2
Shi, L.3
Fredrickson, J.K.4
Zachara, J.M.5
Butt, J.N.6
-
19
-
-
84870912011
-
Mind the gap: cytochrome interactions reveal electron pathways across the periplasm of Shewanella oneidensis MR-1
-
doi: 10.1042/BJ20121467
-
Fonseca, B. M., Paquete, C. M., Neto, S. E., Pacheco, I., Soares, C. M., and Louro, R. O. (2013). Mind the gap: cytochrome interactions reveal electron pathways across the periplasm of Shewanella oneidensis MR-1. Biochem. J. 108, 101-108. doi: 10.1042/BJ20121467
-
(2013)
Biochem. J.
, vol.108
, pp. 101-108
-
-
Fonseca, B.M.1
Paquete, C.M.2
Neto, S.E.3
Pacheco, I.4
Soares, C.M.5
Louro, R.O.6
-
20
-
-
47549087897
-
Towards environmental systems biology of Shewanella
-
doi: 10.1038/nrmicro1947
-
Fredrickson, J. K., Romine, M. F., Beliaev, A. S., Auchtung, J. M., Driscoll, M. E., Gardner, T. S., et al. (2008). Towards environmental systems biology of Shewanella. Nat. Rev. Microbiol. 6, 592-603. doi: 10.1038/nrmicro1947
-
(2008)
Nat. Rev. Microbiol.
, vol.6
, pp. 592-603
-
-
Fredrickson, J.K.1
Romine, M.F.2
Beliaev, A.S.3
Auchtung, J.M.4
Driscoll, M.E.5
Gardner, T.S.6
-
21
-
-
44349123893
-
Electron transfer at the microbe-mineral interface: a grand challenge in biogeochemistry
-
doi: 10.1111/j.1472-4669.2008.00146.x
-
Fredrickson, J. K., and Zachara, J. M. (2008). Electron transfer at the microbe-mineral interface: a grand challenge in biogeochemistry. Geobiology 6, 245-253. doi: 10.1111/j.1472-4669.2008.00146.x
-
(2008)
Geobiology
, vol.6
, pp. 245-253
-
-
Fredrickson, J.K.1
Zachara, J.M.2
-
22
-
-
77954163117
-
Impacts of Shewanella oneidensis c-type cytochromes on aerobic and anaerobic respiration
-
doi: 10.1111/j.1751-7915.2010.00181.x
-
Gao, H., Barua, S., Liang, Y., Wu, L., Dong, Y., Reed, S., et al. (2010). Impacts of Shewanella oneidensis c-type cytochromes on aerobic and anaerobic respiration. Microb. Biotechnol. 3, 455-466. doi: 10.1111/j.1751-7915.2010.00181.x
-
(2010)
Microb. Biotechnol.
, vol.3
, pp. 455-466
-
-
Gao, H.1
Barua, S.2
Liang, Y.3
Wu, L.4
Dong, Y.5
Reed, S.6
-
23
-
-
49149147973
-
Iterative partial equalization of orbital electronegativity-a rapid access to atomic charges
-
doi: 10.1016/0040-4020(80)80168-2
-
Gasteiger, J., and Marsili, M. (1980). Iterative partial equalization of orbital electronegativity-a rapid access to atomic charges. Tetrahedron 36, 3219-3228. doi: 10.1016/0040-4020(80)80168-2
-
(1980)
Tetrahedron
, vol.36
, pp. 3219-3228
-
-
Gasteiger, J.1
Marsili, M.2
-
24
-
-
33645224039
-
Extracellular respiration of dimethyl sulfoxide by Shewanella oneidensis strain MR-1
-
doi: 10.1073/pnas.0505959103
-
Gralnick, J. A., Vali, H., Lies, D. P., and Newman, D. K. (2006). Extracellular respiration of dimethyl sulfoxide by Shewanella oneidensis strain MR-1. Proc. Natl. Acad. Sci. U.S.A. 103, 4669-4674. doi: 10.1073/pnas.0505959103
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 4669-4674
-
-
Gralnick, J.A.1
Vali, H.2
Lies, D.P.3
Newman, D.K.4
-
25
-
-
0032463725
-
Bioenergetics of sulphate-reducing bacteria in relation to their environmental impact
-
doi: 10.1023/A:1008362304234
-
Hamilton, W. A. (1998). Bioenergetics of sulphate-reducing bacteria in relation to their environmental impact. Biodegradation 9, 201-212. doi: 10.1023/A:1008362304234
-
(1998)
Biodegradation
, vol.9
, pp. 201-212
-
-
Hamilton, W.A.1
-
26
-
-
34548393635
-
Characterization of Shewanella oneidensis MtrC: a cell-surface decaheme cytochrome involved in respiratory electron transport to extracellular electron acceptors
-
doi: 10.1007/s00775-007-0278-y
-
Hartshorne, R. S., Jepson, B. N., Clarke, T. A., Field, S. J., Fredrickson, J. K., Zachara, J., et al. (2007). Characterization of Shewanella oneidensis MtrC: a cell-surface decaheme cytochrome involved in respiratory electron transport to extracellular electron acceptors. J. Biol. Inorg. Chem. 12, 1083-1094. doi: 10.1007/s00775-007-0278-y
-
(2007)
J. Biol. Inorg. Chem.
, vol.12
, pp. 1083-1094
-
-
Hartshorne, R.S.1
Jepson, B.N.2
Clarke, T.A.3
Field, S.J.4
Fredrickson, J.K.5
Zachara, J.6
-
27
-
-
2342488714
-
Phenazines and other redox-active antibiotics promote microbial mineral reduction
-
doi: 10.1128/AEM.70.2.921-928.2004
-
Hernandez, M. E., Kappler, A., and Newman, D. K. (2004). Phenazines and other redox-active antibiotics promote microbial mineral reduction. Appl. Environ. Microbiol. 70, 921-928. doi: 10.1128/AEM.70.2.921-928.2004
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 921-928
-
-
Hernandez, M.E.1
Kappler, A.2
Newman, D.K.3
-
28
-
-
33947716119
-
A semiempirical free energy force field with charge-based desolvation
-
doi: 10.1002/jcc.20634
-
Huey, R., Morris, G. M., Olson, A. J., and Goodsell, D. S. (2007). A semiempirical free energy force field with charge-based desolvation. J. Comput. Chem. 28, 1145-1152. doi: 10.1002/jcc.20634
-
(2007)
J. Comput. Chem.
, vol.28
, pp. 1145-1152
-
-
Huey, R.1
Morris, G.M.2
Olson, A.J.3
Goodsell, D.S.4
-
29
-
-
78049289028
-
Probing electron transfer mechanisms in Shewanella oneidensis MR-1 using a nanoelectrode platform and single-cell imaging
-
doi: 10.1073/pnas.1011699107
-
Jiang, X., Hu, J., Fitzgerald, L. A., Biffinger, J. C., Xie, P., Ringeisen, B. R., et al. (2010). Probing electron transfer mechanisms in Shewanella oneidensis MR-1 using a nanoelectrode platform and single-cell imaging. Proc. Natl. Acad. Sci. U.S.A. 107, 16806-16810. doi: 10.1073/pnas.1011699107
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 16806-16810
-
-
Jiang, X.1
Hu, J.2
Fitzgerald, L.A.3
Biffinger, J.C.4
Xie, P.5
Ringeisen, B.R.6
-
30
-
-
77953562742
-
Characterization of the decaheme c-type cytochrome omca in solution and on hematite surfaces by small angle X-Ray scattering and neutron reflectometry
-
doi: 10.1016/j.bpj.2010.03.049
-
Johs, A., Shi, L., Droubay, T. C., Ankner, J. F., and Liang, L. (2010). Characterization of the decaheme c-type cytochrome omca in solution and on hematite surfaces by small angle X-Ray scattering and neutron reflectometry. Biophys. J. 98, 3035-3043. doi: 10.1016/j.bpj.2010.03.049
-
(2010)
Biophys. J.
, vol.98
, pp. 3035-3043
-
-
Johs, A.1
Shi, L.2
Droubay, T.C.3
Ankner, J.F.4
Liang, L.5
-
31
-
-
84874582197
-
Flavin electron shuttles dominate extracellular electron transfer by Shewanella oneidensis
-
e00553-12, doi: 10.1128/mBio.00553-12.
-
Kotloski, N. J., and Gralnick, J. A. (2013). Flavin electron shuttles dominate extracellular electron transfer by Shewanella oneidensis. mBio 4:e00553-12. doi: 10.1128/mBio.00553-12
-
(2013)
mBio
, vol.4
-
-
Kotloski, N.J.1
Gralnick, J.A.2
-
32
-
-
23744478281
-
Shewanella oneidensis MR-1 uses overlapping pathways for iron reduction at a distance and by direct contact under conditions relevant for biofilms
-
doi: 10.1128/AEM.71.8.4414
-
Lies, D. P., Hernandez, M. E., Kappler, A., Mielke, R. E., Gralnick, J. A., and Newman, D. K. (2005). Shewanella oneidensis MR-1 uses overlapping pathways for iron reduction at a distance and by direct contact under conditions relevant for biofilms. Society 71, 4414-4426. doi: 10.1128/AEM.71.8.4414
-
(2005)
Society
, vol.71
, pp. 4414-4426
-
-
Lies, D.P.1
Hernandez, M.E.2
Kappler, A.3
Mielke, R.E.4
Gralnick, J.A.5
Newman, D.K.6
-
33
-
-
78449295718
-
Redox-responsive switching in bacterial respiratory pathways involving extracellular electron transfer
-
doi: 10.1002/cssc.201000213
-
Liu, H., Matsuda, S., Kato, S., Hashimoto, K., and Nakanishi, S. (2010). Redox-responsive switching in bacterial respiratory pathways involving extracellular electron transfer. ChemSusChem 3, 1253-1256. doi: 10.1002/cssc.201000213
-
(2010)
ChemSusChem
, vol.3
, pp. 1253-1256
-
-
Liu, H.1
Matsuda, S.2
Kato, S.3
Hashimoto, K.4
Nakanishi, S.5
-
34
-
-
64749084426
-
Exoelectrogenic bacteria that power microbial fuel cells
-
doi: 10.1038/nrmicro2113
-
Logan, B. E. (2009). Exoelectrogenic bacteria that power microbial fuel cells. Nat. Rev. Microbiol. 7, 375-381. doi: 10.1038/nrmicro2113
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 375-381
-
-
Logan, B.E.1
-
35
-
-
0029790133
-
Humic substances as electron acceptors for microbial respiration
-
doi: 10.1038/382445a0
-
Lovley, D., Coates, J. D., Blunt-Harris, E., Phillips, E., and Woodward, J. (1996). Humic substances as electron acceptors for microbial respiration. Nature 382, 445-448. doi: 10.1038/382445a0
-
(1996)
Nature
, vol.382
, pp. 445-448
-
-
Lovley, D.1
Coates, J.D.2
Blunt-Harris, E.3
Phillips, E.4
Woodward, J.5
-
36
-
-
33744906766
-
Microbial fuel cells: novel microbial physiologies and engineering approaches
-
doi: 10.1016/j.copbio.2006.04.006
-
Lovley, D. R. (2006). Microbial fuel cells: novel microbial physiologies and engineering approaches. Curr. Opin. Biotechnol. 17, 327-332. doi: 10.1016/j.copbio.2006.04.006
-
(2006)
Curr. Opin. Biotechnol.
, vol.17
, pp. 327-332
-
-
Lovley, D.R.1
-
37
-
-
84870016648
-
Electromicrobiology
-
doi: 10.1146/annurev-micro-092611-150104
-
Lovley, D. R. (2012). Electromicrobiology. Annu. Rev. Microbiol. 66, 391-409. doi: 10.1146/annurev-micro-092611-150104
-
(2012)
Annu. Rev. Microbiol.
, vol.66
, pp. 391-409
-
-
Lovley, D.R.1
-
38
-
-
43749121443
-
In vitro evolution of a peptide with a hematite binding motif that may constitute a natural metal-oxide binding archetype
-
doi: 10.1021/es702688c
-
Lower, B. H., Lins, R. D., Oestreicher, Z., Straatsma, T. P., Hochella, M. F., Shi, L., et al. (2008). In vitro evolution of a peptide with a hematite binding motif that may constitute a natural metal-oxide binding archetype. Environ. Sci. Technol. 42, 3821-3827. doi: 10.1021/es702688c
-
(2008)
Environ. Sci. Technol.
, vol.42
, pp. 3821-3827
-
-
Lower, B.H.1
Lins, R.D.2
Oestreicher, Z.3
Straatsma, T.P.4
Hochella, M.F.5
Shi, L.6
-
39
-
-
65549089956
-
Antibody recognition force microscopy shows that outer membrane cytochromes OmcA and MtrC are expressed on the exterior surface of Shewanella oneidensis MR-1
-
doi: 10.1128/AEM.02108-08
-
Lower, B. H., Yongsunthon, R., Shi, L., Wildling, L., Gruber, H. J., Wigginton, N. S., et al. (2009). Antibody recognition force microscopy shows that outer membrane cytochromes OmcA and MtrC are expressed on the exterior surface of Shewanella oneidensis MR-1. Appl. Environ. Microbiol. 75, 2931-2935. doi: 10.1128/AEM.02108-08
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 2931-2935
-
-
Lower, B.H.1
Yongsunthon, R.2
Shi, L.3
Wildling, L.4
Gruber, H.J.5
Wigginton, N.S.6
-
40
-
-
41649085415
-
Shewanella secretes flavins that mediate extracellular electron transfer
-
doi: 10.1073/pnas.0710525105
-
Marsili, E., Baron, D. B., Shikhare, I. D., Coursolle, D., Gralnick, J. A., and Bond, D. R. (2008). Shewanella secretes flavins that mediate extracellular electron transfer. Proc. Natl. Acad. Sci. U.S.A. 105, 6-11. doi: 10.1073/pnas.0710525105
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 6-11
-
-
Marsili, E.1
Baron, D.B.2
Shikhare, I.D.3
Coursolle, D.4
Gralnick, J.A.5
Bond, D.R.6
-
41
-
-
49749184695
-
The microestimation of succinate and the extinction coefficient of cytochrome c
-
doi: 10.1016/0006-3002(59)90259-8
-
Massey, V. (1959). The microestimation of succinate and the extinction coefficient of cytochrome c. Biochim. Biophys. Acta 34, 255-256. doi: 10.1016/0006-3002(59)90259-8
-
(1959)
Biochim. Biophys. Acta
, vol.34
, pp. 255-256
-
-
Massey, V.1
-
42
-
-
1842631445
-
Identification of 42 possible cytochrome C genes in the Shewanella oneidensis genome and characterization of six soluble cytochromes
-
doi: 10.1089/153623104773547499
-
Meyer, T. E., Tsapin, A. I., Vandenberghe, I., de Smet, L., Frishman, D., Nealson, K. H., et al. (2004). Identification of 42 possible cytochrome C genes in the Shewanella oneidensis genome and characterization of six soluble cytochromes. OMICS 8, 57-77. doi: 10.1089/153623104773547499
-
(2004)
OMICS
, vol.8
, pp. 57-77
-
-
Meyer, T.E.1
Tsapin, A.I.2
Vandenberghe, I.3
de Smet, L.4
Frishman, D.5
Nealson, K.H.6
-
43
-
-
11644261806
-
Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
-
doi: 10.1002/(SICI)1096-987X(19981115)19:14<1639::AID-JCC10>3.0.CO;2-B
-
Morris, G. M., Goodsell, D. S., Halliday, R. S., Huey, R., Hart, W. E., Belew, R. K., et al. (1998). Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. J. Comput. Chem. 19, 1639-1662. doi: 10.1002/(SICI)1096-987X(19981115)19:14<1639::AID-JCC10>3.0.CO;2-B
-
(1998)
J. Comput. Chem.
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
-
44
-
-
70349932423
-
AutoDock4 and AutoDockTools4: automated docking with selective receptor flexibility
-
doi: 10.1002/jcc.21256
-
Morris, G. M., Huey, R., Lindstrom, W., Sanner, M. F., Belew, R. K., Goodsell, D. S., et al. (2009). AutoDock4 and AutoDockTools4: automated docking with selective receptor flexibility. J. Comput. Chem. 30, 2785-2791. doi: 10.1002/jcc.21256
-
(2009)
J. Comput. Chem.
, vol.30
, pp. 2785-2791
-
-
Morris, G.M.1
Huey, R.2
Lindstrom, W.3
Sanner, M.F.4
Belew, R.K.5
Goodsell, D.S.6
-
45
-
-
0024219883
-
Bacterial manganese reduction and growth with manganese oxide as the sole electron acceptor
-
doi: 10.1126/science.240.4857.1319
-
Myers, C. R., and Nealson, K. H. (1988). Bacterial manganese reduction and growth with manganese oxide as the sole electron acceptor. Science 240, 1319-1321. doi: 10.1126/science.240.4857.1319
-
(1988)
Science
, vol.240
, pp. 1319-1321
-
-
Myers, C.R.1
Nealson, K.H.2
-
46
-
-
0035166832
-
Role for outer membrane cytochromes OmcA and OmcB of Shewanella putrefaciens MR-1 in reduction of manganese dioxide
-
doi: 10.1128/AEM.67.1.260-269.2001
-
Myers, J. M., and Myers, C. R. (2001). Role for outer membrane cytochromes OmcA and OmcB of Shewanella putrefaciens MR-1 in reduction of manganese dioxide. Appl. Environ. Microbiol. 67, 260-269. doi: 10.1128/AEM.67.1.260-269.2001
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 260-269
-
-
Myers, J.M.1
Myers, C.R.2
-
47
-
-
0034604081
-
A role for excreted quinones in extracellular electron transfer
-
doi: 10.1038/35011098
-
Newman, D. K., and Kolter, R. (2000). A role for excreted quinones in extracellular electron transfer. Nature 405, 94-97. doi: 10.1038/35011098
-
(2000)
Nature
, vol.405
, pp. 94-97
-
-
Newman, D.K.1
Kolter, R.2
-
48
-
-
84877334667
-
Rate enhancement of bacterial extracellular electron transport involves bound flavin semiquinones
-
doi: 10.1073/pnas.1220823110
-
Okamoto, A., Hashimoto, K., Nealson, K. H., and Nakamura, R. (2013). Rate enhancement of bacterial extracellular electron transport involves bound flavin semiquinones. Proc. Natl. Acad. Sci. U.S.A. 110, 7856-7861. doi: 10.1073/pnas.1220823110
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, pp. 7856-7861
-
-
Okamoto, A.1
Hashimoto, K.2
Nealson, K.H.3
Nakamura, R.4
-
49
-
-
84899911320
-
Corrosion problems during oil and gas production and its mitigation
-
doi: 10.1186/2228-5547-4-35
-
Popoola, L., Grema, A., Latinwo, G., Gutti, B., and Balogun, A. (2013). Corrosion problems during oil and gas production and its mitigation. Int. J. Ind. Chem. 4, 35. doi: 10.1186/2228-5547-4-35
-
(2013)
Int. J. Ind. Chem.
, vol.4
, pp. 35
-
-
Popoola, L.1
Grema, A.2
Latinwo, G.3
Gutti, B.4
Balogun, A.5
-
50
-
-
0019878541
-
The thermodynamic properties of some commonly used oxidation-reduction mediators, inhibitors and dyes, as determined by polarography
-
doi: 10.1016/0005-2728(81)90014-1
-
Prince, R. C., Linkletter, S. J. G., and Dutton, P. L. (1981). The thermodynamic properties of some commonly used oxidation-reduction mediators, inhibitors and dyes, as determined by polarography. Biochim. Biochem. Acta 635, 132-148. doi: 10.1016/0005-2728(81)90014-1
-
(1981)
Biochim. Biochem. Acta
, vol.635
, pp. 132-148
-
-
Prince, R.C.1
Linkletter, S.J.G.2
Dutton, P.L.3
-
51
-
-
84861499469
-
Exploring the biochemistry at the extracellular redox frontier of bacterial mineral Fe(III) respiration
-
doi: 10.1042/BST20120018
-
Richardson, D. J., Edwards, M. J., White, G. F., Baiden, N., Hartshorne, R. S., Fredrickson, J. K., et al. (2012). Exploring the biochemistry at the extracellular redox frontier of bacterial mineral Fe(III) respiration. Biochem. Soc. Trans. 40, 493-500. doi: 10.1042/BST20120018
-
(2012)
Biochem. Soc. Trans.
, vol.40
, pp. 493-500
-
-
Richardson, D.J.1
Edwards, M.J.2
White, G.F.3
Baiden, N.4
Hartshorne, R.S.5
Fredrickson, J.K.6
-
52
-
-
44249087419
-
Identification of mobile elements and pseudogenes in the Shewanella oneidensis MR-1 genome
-
doi: 10.1128/AEM.02720-07
-
Romine, M. F., Carlson, T. S., Norbeck, A. D., McCue, L. A., and Lipton, M. S. (2008). Identification of mobile elements and pseudogenes in the Shewanella oneidensis MR-1 genome. Appl. Environ. Microbiol. 74, 3257-3265. doi: 10.1128/AEM.02720-07
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 3257-3265
-
-
Romine, M.F.1
Carlson, T.S.2
Norbeck, A.D.3
McCue, L.A.4
Lipton, M.S.5
-
53
-
-
68549125315
-
Kinetic characterization of OmcA and MtrC, terminal reductases involved in respiratory electron transfer for dissimilatory iron reduction in Shewanella oneidensis MR-1
-
doi: 10.1128/AEM.00544-09
-
Ross, D. E., Brantley, S. L., and Tien, M. (2009). Kinetic characterization of OmcA and MtrC, terminal reductases involved in respiratory electron transfer for dissimilatory iron reduction in Shewanella oneidensis MR-1. Appl. Environ. Microbiol. 75, 5218-5226. doi: 10.1128/AEM.00544-09
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 5218-5226
-
-
Ross, D.E.1
Brantley, S.L.2
Tien, M.3
-
54
-
-
34648827433
-
Characterization of protein-protein interactions involved in iron reduction by Shewanella oneidensis MR-1
-
doi: 10.1128/AEM.00146-07
-
Ross, D. E., Ruebush, S. S., Brantley, S. L., Hartshorne, R. S., Clarke, T. A., Richardson, D. J., et al. (2007). Characterization of protein-protein interactions involved in iron reduction by Shewanella oneidensis MR-1. Appl. Environ. Microbiol. 73, 5797-5808. doi: 10.1128/AEM.00146-07
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 5797-5808
-
-
Ross, D.E.1
Ruebush, S.S.2
Brantley, S.L.3
Hartshorne, R.S.4
Clarke, T.A.5
Richardson, D.J.6
-
55
-
-
43049111017
-
Impact of nitrate on the structure and function of bacterial biofilm communities in pipelines used for injection of seawater into oil fields
-
doi: 10.1128/AEM.02027-07
-
Schwermer, C. U., Lavik, G., Abed, R. M. M., Dunsmore, B., Ferdelman, T. G., Stoodley, P., et al. (2008). Impact of nitrate on the structure and function of bacterial biofilm communities in pipelines used for injection of seawater into oil fields. Appl. Environ. Microbiol. 74, 2841-2851. doi: 10.1128/AEM.02027-07
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 2841-2851
-
-
Schwermer, C.U.1
Lavik, G.2
Abed, R.M.M.3
Dunsmore, B.4
Ferdelman, T.G.5
Stoodley, P.6
-
56
-
-
13444252338
-
Overexpression of multi-heme C-type cytochromes
-
doi: 10.2144/05382PT01
-
Shi, L., Lin, J.-T., Markillie, L. M., Squier, T. C., and Hooker, B. S. (2005). Overexpression of multi-heme C-type cytochromes. Biotechniques 38, 297-299. doi: 10.2144/05382PT01
-
(2005)
Biotechniques
, vol.38
, pp. 297-299
-
-
Shi, L.1
Lin, J.-T.2
Markillie, L.M.3
Squier, T.C.4
Hooker, B.S.5
-
57
-
-
84868569888
-
Redox reactions of reduced flavin mononucleotide (FMN), riboflavin (RBF), and anthraquinone-2,6-disulfonate (AQDS) with ferrihydrite and lepidocrocite
-
doi: 10.1021/es301544b
-
Shi, Z., Zachara, J. M., Shi, L., Wang, Z., Moore, D. A., Kennedy, D. W., et al. (2012). Redox reactions of reduced flavin mononucleotide (FMN), riboflavin (RBF), and anthraquinone-2,6-disulfonate (AQDS) with ferrihydrite and lepidocrocite. Environ. Sci. Technol. 46, 11644-11652. doi: 10.1021/es301544b
-
(2012)
Environ. Sci. Technol.
, vol.46
, pp. 11644-11652
-
-
Shi, Z.1
Zachara, J.M.2
Shi, L.3
Wang, Z.4
Moore, D.A.5
Kennedy, D.W.6
-
58
-
-
38949214833
-
Secretion of flavins by Shewanella species and their role in extracellular electron transfer
-
doi: 10.1128/AEM.01387-07
-
Von Canstein, H., Ogawa, J., Shimizu, S., and Lloyd, J. R. (2008). Secretion of flavins by Shewanella species and their role in extracellular electron transfer. Appl. Environ. Microbiol. 74, 615-623. doi: 10.1128/AEM.01387-07
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 615-623
-
-
Von Canstein, H.1
Ogawa, J.2
Shimizu, S.3
Lloyd, J.R.4
-
59
-
-
79957984323
-
Production-related petroleum microbiology: progress and prospects
-
doi: 10.1016/j.copbio.2010.12.005
-
Voordouw, G. (2011). Production-related petroleum microbiology: progress and prospects. Curr. Opin. Biotechnol. 22, 401-405. doi: 10.1016/j.copbio.2010.12.005
-
(2011)
Curr. Opin. Biotechnol.
, vol.22
, pp. 401-405
-
-
Voordouw, G.1
-
60
-
-
0000171230
-
A new method for preparing flavin-adenine dinucleotide
-
Whitby, L. (1953). A new method for preparing flavin-adenine dinucleotide. Biochem. J. 54, 437-442.
-
(1953)
Biochem. J.
, vol.54
, pp. 437-442
-
-
Whitby, L.1
-
61
-
-
0038470801
-
Transient protein interactions studied by NMR spectroscopy: the case of
-
doi: 10.1021/bi0342968
-
Worrall, J. A. R., Reinle, W., Bernhardt, R., and Ubbink, M. (2003). Transient protein interactions studied by NMR spectroscopy: the case of. Biochemistry 450, 7068-7076. doi: 10.1021/bi0342968
-
(2003)
Biochemistry
, vol.450
, pp. 7068-7076
-
-
Worrall, J.A.R.1
Reinle, W.2
Bernhardt, R.3
Ubbink, M.4
-
62
-
-
63049119068
-
Identification of protein-protein interactions and topologies in living cells with chemical cross-linking and mass spectrometry
-
doi: 10.1074/mcp.M800232-MCP200
-
Zhang, H., Tang, X., Munske, G. R., Tolic, N., Anderson, G. A., and Bruce, J. E. (2009). Identification of protein-protein interactions and topologies in living cells with chemical cross-linking and mass spectrometry. Mol. Cell. Proteomics 8, 409-420. doi: 10.1074/mcp.M800232-MCP200
-
(2009)
Mol. Cell. Proteomics
, vol.8
, pp. 409-420
-
-
Zhang, H.1
Tang, X.2
Munske, G.R.3
Tolic, N.4
Anderson, G.A.5
Bruce, J.E.6
|