-
1
-
-
7044222207
-
Dissimilatory Fe(III) and Mn(IV) reduction
-
DOI 10.1016/S0065-2911(04)49005-5, PII S0065291104490055
-
Lovley, D.R., Holmes, D.E. and Nevin, K.P. (2004) Dissimilatory Fe(III) and Mn(IV) reduction. Adv. Microb. Physiol. 49, 219-286 (Pubitemid 39424008)
-
(2004)
Advances in Microbial Physiology
, vol.49
, pp. 219-286
-
-
Lovley, D.R.1
Holmes, D.E.2
Nevin, K.P.3
-
2
-
-
10944259840
-
The genetics of geochemistry
-
DOI 10.1146/annurev.genet.38.072902.091138
-
Croal, L.R., Gralnick, J.A., Malasarn, D. and Newman, D.K. (2004) The genetics of geochemistry. Annu. Rev. Genet. 38, 175-202 (Pubitemid 40013727)
-
(2004)
Annual Review of Genetics
, vol.38
, pp. 175-202
-
-
Croal, L.R.1
Gralnick, J.A.2
Malasarn, D.3
Newman, D.K.4
-
3
-
-
84863520275
-
Molecular underpinnings of Fe(III) oxide reduction by Shewanella oneidensis MR-1
-
Shi, L., Rosso, K.M., Clarke, T.A., Richardson, D.J., Zachara, J. and Fredrickson, J. (2012) Molecular underpinnings of Fe(III) oxide reduction by Shewanella oneidensis MR-1. Front. Microbiol. Chem. 3, 10
-
(2012)
Front. Microbiol. Chem.
, vol.3
, pp. 10
-
-
Shi, L.1
Rosso, K.M.2
Clarke, T.A.3
Richardson, D.J.4
Zachara, J.5
Fredrickson, J.6
-
4
-
-
73349134931
-
Characterization of an electron conduit between bacteria and the extracellular environment
-
Hartshorne, R., Reardon, C., Ross, D., Nuester, J., Clarke, T., Gates, A., Mills, P., Fredrickson, J., Zachara, J., Shi, L. et al. (2009) Characterization of an electron conduit between bacteria and the extracellular environment. Proc. Natl. Acad. Sci. U.S.A. 106, 22169-22174
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 22169-22174
-
-
Hartshorne, R.1
Reardon, C.2
Ross, D.3
Nuester, J.4
Clarke, T.5
Gates, A.6
Mills, P.7
Fredrickson, J.8
Zachara, J.9
Shi, L.10
-
5
-
-
47549087897
-
Towards environmental systems biology of Shewanella
-
Fredrickson, J.K., Romine, M.F., Beliaev, A.S., Auchtung, J.M., Driscoll, M.E., Gardner, T.S., Nealson, K.H., Osterman, A.L., Pinchuk, G., Reed, J.L. et al. (2008) Towards environmental systems biology of Shewanella. Nat. Rev. Microbiol. 6, 592-603
-
(2008)
Nat. Rev. Microbiol.
, vol.6
, pp. 592-603
-
-
Fredrickson, J.K.1
Romine, M.F.2
Beliaev, A.S.3
Auchtung, J.M.4
Driscoll, M.E.5
Gardner, T.S.6
Nealson, K.H.7
Osterman, A.L.8
Pinchuk, G.9
Reed, J.L.10
-
6
-
-
33745449038
-
Isolation of a high-affinity functional protein complex between OmcA and MtrC: Two outer membrane decaheme c-type cytochromes of Shewanella oneidensis MR-1
-
DOI 10.1128/JB.01966-05
-
Shi, L., Chen, B.W., Wang, Z.M., Elias, D.A., Mayer, M.U., Gorby, Y.A., Ni, S., Lower, B.H., Kennedy, D.W., Wunschel, D.S. et al. (2006) Isolation of a high-affinity functional protein complex between OmcA and MtrC: two outer membrane decaheme c-type cytochromes of Shewanella oneidensis MR-1. J. Bacteriol. 188, 4705-4714 (Pubitemid 43956069)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.13
, pp. 4705-4714
-
-
Shi, L.1
Chen, B.2
Wang, Z.3
Elias, D.A.4
Mayer, M.U.5
Gorby, Y.A.6
Ni, S.7
Lower, B.H.8
Kennedy, D.W.9
Wunschel, D.S.10
Mottaz, H.M.11
Marshall, M.J.12
Hill, E.A.13
Beliaev, A.S.14
Zachara, J.M.15
Fredrickson, J.K.16
Squier, T.C.17
-
7
-
-
77955382673
-
Modularity of the Mtr respiratory pathway of Shewanella oneidensis strain MR-1
-
Coursolle, D. and Gralnick, J.A. (2010) Modularity of the Mtr respiratory pathway of Shewanella oneidensis strain MR-1. Mol. Microbiol. 77, 995-1008
-
(2010)
Mol. Microbiol.
, vol.77
, pp. 995-1008
-
-
Coursolle, D.1
Gralnick, J.A.2
-
8
-
-
79961093488
-
Identification and characterization of UndA(HRCR-6), an outer membrane endecaheme c-type cytochrome of Shewanella sp strain HRCR-6
-
Shi, L., Belchik, S.M., Wang, Z.M., Kennedy, D.W., Dohnalkova, A.C., Marshall, M.J., Zachara, J.M. and Fredrickson, J.K. (2011) Identification and characterization of UndA(HRCR-6), an outer membrane endecaheme c-type cytochrome of Shewanella sp strain HRCR-6. Appl. Environ. Microbiol. 77, 5521-5523
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 5521-5523
-
-
Shi, L.1
Belchik, S.M.2
Wang, Z.M.3
Kennedy, D.W.4
Dohnalkova, A.C.5
Marshall, M.J.6
Zachara, J.M.7
Fredrickson, J.K.8
-
9
-
-
84863521885
-
The crystal structure of the extracellular 11-heme cytochrome UndA reveals a conserved 10-heme motif and defined binding site for soluble iron chelates
-
Edwards, M.J., Hall, A., Shi, L., Fredrickson, J.K., Zachara, J.M., Butt, J.N., Richardson, D.J. and Clarke, T.A. (2012) The crystal structure of the extracellular 11-heme cytochrome UndA reveals a conserved 10-heme motif and defined binding site for soluble iron chelates. Structure 20, 1275-1284
-
(2012)
Structure
, vol.20
, pp. 1275-1284
-
-
Edwards, M.J.1
Hall, A.2
Shi, L.3
Fredrickson, J.K.4
Zachara, J.M.5
Butt, J.N.6
Richardson, D.J.7
Clarke, T.A.8
-
10
-
-
79959370190
-
Structure of a bacterial cell surface decaheme electron conduit
-
Clarke, T.A., Edwards, M.J., Gates, A.J., Hall, A., White, G.F., Bradley, J., Reardon, C.L., Shi, L., Beliaev, A.S., Marshall, M.J. et al. (2011) Structure of a bacterial cell surface decaheme electron conduit. Proc. Natl. Acad. Sci. U.S.A. 108, 9384-9389
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 9384-9389
-
-
Clarke, T.A.1
Edwards, M.J.2
Gates, A.J.3
Hall, A.4
White, G.F.5
Bradley, J.6
Reardon, C.L.7
Shi, L.8
Beliaev, A.S.9
Marshall, M.J.10
-
11
-
-
36448991500
-
ClustalW and ClustalX version 2
-
Larkin, M.A., Blackshields, G., Brown, N.P., Chenna, R., McGettigan, P.A., McWilliam, H., Valentin, F., Wallace, I.M., Wilm, A., Lopez, R. et al. (2007) ClustalW and ClustalX version 2. Bioinformatics 23, 2947-2948
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
-
12
-
-
65449188232
-
Jalview Version 2: A multiple sequence alignment editor and analysis workbench
-
Waterhouse, A.M., Procter, J.B., Martin, D.M. A., Clamp, M. and Barton, G.J. (2009) Jalview Version 2: a multiple sequence alignment editor and analysis workbench. Bioinformatics 25, 1189-1191
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.A.3
Clamp, M.4
Barton, G.J.5
-
13
-
-
43749107283
-
Comparative protein structure modeling using MODELLER
-
doi:10.1002/0471250953.bi0506s15
-
Eswar, N., Marti-Renom, M.A., Webb, B., Madhusudhan, M.S., Eramian, D., Shen, M., Pieper, U. and Sali, A. (2006) Comparative protein structure modeling using MODELLER. Curr. Protoc. Bioinf., doi:10.1002/0471250953.bi0506s15
-
(2006)
Curr. Protoc. Bioinf.
-
-
Eswar, N.1
Marti-Renom, M.A.2
Webb, B.3
Madhusudhan, M.S.4
Eramian, D.5
Shen, M.6
Pieper, U.7
Sali, A.8
-
14
-
-
34548393635
-
Characterization of Shewanella oneidensis MtrC: A cell-surface decaheme cytochrome involved in respiratory electron transport to extracellular electron acceptors
-
DOI 10.1007/s00775-007-0278-y
-
Hartshorne, R.S., Jepson, B.N., Clarke, T.A., Field, S.J., Fredrickson, J., Zachara, J., Shi, L., Butt, J.N. and Richardson, D.J. (2007) Characterization of Shewanella oneidensis MtrC: a cell-surface decaheme cytochrome involved in respiratory electron transport to extracellular electron acceptors. J. Biol. Inorg. Chem. 12, 1083-1094 (Pubitemid 47353552)
-
(2007)
Journal of Biological Inorganic Chemistry
, vol.12
, Issue.7
, pp. 1083-1094
-
-
Hartshorne, R.S.1
Jepson, B.N.2
Clarke, T.A.3
Field, S.J.4
Fredrickson, J.5
Zachara, J.6
Shi, L.7
Butt, J.N.8
Richardson, D.J.9
-
15
-
-
79953765276
-
Presenting your structures: The CCP4mg molecular-graphics software
-
McNicholas, S., Potterton, E., Wilson, K.S. and Noble, M.E. (2011) Presenting your structures: the CCP4mg molecular-graphics software. Acta Crystallogr. Sect. D Biol. Crystallogr. 15, 386-394
-
(2011)
Acta Crystallogr. Sect. D Biol. Crystallogr.
, vol.15
, pp. 386-394
-
-
McNicholas, S.1
Potterton, E.2
Wilson, K.S.3
Noble, M.E.4
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