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Volumn 1, Issue , 2014, Pages 25-30

Evolutionary insights into DNA methylation in insects

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EID: 84904697680     PISSN: 22145745     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cois.2014.04.001     Document Type: Review
Times cited : (53)

References (52)
  • 1
    • 76749134306 scopus 로고    scopus 로고
    • Phenotypic plasticity and diversity in insects
    • A.P. Moczek Phenotypic plasticity and diversity in insects Philos Trans R Soc B 365 2010 593 603
    • (2010) Philos Trans R Soc B , vol.365 , pp. 593-603
    • Moczek, A.P.1
  • 3
    • 78049402859 scopus 로고    scopus 로고
    • Molecular signals of epigenetic states
    • R. Bonasio, S. Tu, and D. Reinberg Molecular signals of epigenetic states Science 330 2010 612 616
    • (2010) Science , vol.330 , pp. 612-616
    • Bonasio, R.1    Tu, S.2    Reinberg, D.3
  • 4
    • 84863986133 scopus 로고    scopus 로고
    • Functions of DNA methylation: Islands, start sites, gene bodies and beyond
    • P.A. Jones Functions of DNA methylation: islands, start sites, gene bodies and beyond Nat Rev Genet 13 2012 484 492
    • (2012) Nat Rev Genet , vol.13 , pp. 484-492
    • Jones, P.A.1
  • 5
    • 43749098985 scopus 로고    scopus 로고
    • DNA methylation landscapes: Provocative insights from epigenomics
    • M.M. Suzuki, and A. Bird DNA methylation landscapes: provocative insights from epigenomics Nat Rev Genet 9 2008 465 476
    • (2008) Nat Rev Genet , vol.9 , pp. 465-476
    • Suzuki, M.M.1    Bird, A.2
  • 6
    • 0026511141 scopus 로고
    • 5-Methylcytosine content in Gryllotalpa fossor (Orthoptera)
    • S. Soma, and S.R.V. Rao 5-Methylcytosine content in Gryllotalpa fossor (Orthoptera) Genome 35 1992 163 166
    • (1992) Genome , vol.35 , pp. 163-166
    • Soma, S.1    Rao, S.R.V.2
  • 7
    • 80052964166 scopus 로고    scopus 로고
    • DNA methylation in insects: On the brink of the epigenomic era
    • K.M. Glastad, B.G. Hunt, S.V. Yi, and M.A.D. Goodisman DNA methylation in insects: on the brink of the epigenomic era Insect Mol Biol 20 2011 553 565
    • (2011) Insect Mol Biol , vol.20 , pp. 553-565
    • Glastad, K.M.1    Hunt, B.G.2    Yi, S.V.3    Goodisman, M.A.D.4
  • 8
    • 41349085806 scopus 로고    scopus 로고
    • Nutritional control of reproductive status in honeybees via DNA methylation
    • R. Kucharski, J. Maleszka, S. Foret, and R. Maleszka Nutritional control of reproductive status in honeybees via DNA methylation Science 319 2008 1827 1830
    • (2008) Science , vol.319 , pp. 1827-1830
    • Kucharski, R.1    Maleszka, J.2    Foret, S.3    Maleszka, R.4
  • 9
    • 79953061203 scopus 로고    scopus 로고
    • Insects as innovative models for functional studies of DNA methylation
    • F. Lyko, and R. Maleszka Insects as innovative models for functional studies of DNA methylation Trends Genet 27 2011 127 131
    • (2011) Trends Genet , vol.27 , pp. 127-131
    • Lyko, F.1    Maleszka, R.2
  • 10
    • 84901453126 scopus 로고    scopus 로고
    • The role of chromatin and epigenetics in the polyphenisms of ant castes
    • 10.1093/bfgp/elt056
    • R. Bonasio The role of chromatin and epigenetics in the polyphenisms of ant castes Brief Funct Genom 2014 10.1093/bfgp/elt056
    • (2014) Brief Funct Genom
    • Bonasio, R.1
  • 12
    • 84874650026 scopus 로고    scopus 로고
    • Evidence of a conserved functional role for DNA methylation in termites
    • K.M. Glastad, B.G. Hunt, and M.A.D. Goodisman Evidence of a conserved functional role for DNA methylation in termites Insect Mol Biol 22 2013 143 154
    • (2013) Insect Mol Biol , vol.22 , pp. 143-154
    • Glastad, K.M.1    Hunt, B.G.2    Goodisman, M.A.D.3
  • 13
    • 70349635324 scopus 로고    scopus 로고
    • The genome of the stick insect Medauroidea extradentata is strongly methylated within genes and repetitive DNA
    • V. Krauss, C. Eisenhardt, and T. Unger The genome of the stick insect Medauroidea extradentata is strongly methylated within genes and repetitive DNA PLoS One 4 2009 e7223
    • (2009) PLoS One , vol.4 , pp. 7223
    • Krauss, V.1    Eisenhardt, C.2    Unger, T.3
  • 14
    • 84864659030 scopus 로고    scopus 로고
    • The evolution of invertebrate gene body methylation
    • S. Sarda, J. Zeng, B.G. Hunt, and S.V. Yi The evolution of invertebrate gene body methylation Mol Biol Evol 29 2012 1907 1916
    • (2012) Mol Biol Evol , vol.29 , pp. 1907-1916
    • Sarda, S.1    Zeng, J.2    Hunt, B.G.3    Yi, S.V.4
  • 15
    • 78649955848 scopus 로고    scopus 로고
    • The honey bee epigenomes: Differential methylation of brain DNA in queens and workers
    • F. Lyko, S. Foret, R. Kucharski, S. Wolf, C. Falckenhayn, and R. Maleszka The honey bee epigenomes: differential methylation of brain DNA in queens and workers PLoS Biol 8 2010 e1000506
    • (2010) PLoS Biol , vol.8 , pp. 1000506
    • Lyko, F.1    Foret, S.2    Kucharski, R.3    Wolf, S.4    Falckenhayn, C.5    Maleszka, R.6
  • 17
    • 84876520219 scopus 로고    scopus 로고
    • Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects
    • B.G. Hunt, K.M. Glastad, S.V. Yi, and M.A.D. Goodisman Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects Genome Biol Evol 5 2013 591 598
    • (2013) Genome Biol Evol , vol.5 , pp. 591-598
    • Hunt, B.G.1    Glastad, K.M.2    Yi, S.V.3    Goodisman, M.A.D.4
  • 19
    • 67650488920 scopus 로고    scopus 로고
    • DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera
    • N. Elango, B.G. Hunt, M.A.D. Goodisman, and S.V. Yi DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera Proc Natl Acad Sci USA 106 2009 11206 11211
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 11206-11211
    • Elango, N.1    Hunt, B.G.2    Goodisman, M.A.D.3    Yi, S.V.4
  • 20
    • 77958479693 scopus 로고    scopus 로고
    • Functional conservation of DNA methylation in the pea aphid and the honeybee
    • B.G. Hunt, J.A. Brisson, S.V. Yi, and M.A.D. Goodisman Functional conservation of DNA methylation in the pea aphid and the honeybee Genome Biol Evol 2 2010 719 728
    • (2010) Genome Biol Evol , vol.2 , pp. 719-728
    • Hunt, B.G.1    Brisson, J.A.2    Yi, S.V.3    Goodisman, M.A.D.4
  • 23
    • 84866145900 scopus 로고    scopus 로고
    • Genome-wide association between DNA methylation and alternative splicing in an invertebrate
    • K. Flores, F. Wolschin, A. Allen, J. Corneveaux, M. Huentelman, and G. Amdam Genome-wide association between DNA methylation and alternative splicing in an invertebrate BMC Genom 13 2012 480
    • (2012) BMC Genom , vol.13 , pp. 480
    • Flores, K.1    Wolschin, F.2    Allen, A.3    Corneveaux, J.4    Huentelman, M.5    Amdam, G.6
  • 24
    • 80555125018 scopus 로고    scopus 로고
    • Comparative methylomics reveals gene-body H3K36me3 in Drosophila predicts DNA methylation and CpG landscapes in other invertebrates
    • L. Nanty, G. Carbajosa, G.A. Heap, F. Ratnieks, D.A. van Heel, T.A. Down, and V.K. Rakyan Comparative methylomics reveals gene-body H3K36me3 in Drosophila predicts DNA methylation and CpG landscapes in other invertebrates Genome Res 21 2011 1841 1850
    • (2011) Genome Res , vol.21 , pp. 1841-1850
    • Nanty, L.1    Carbajosa, G.2    Heap, G.A.3    Ratnieks, F.4    Van Heel, D.A.5    Down, T.A.6    Rakyan, V.K.7
  • 25
    • 68049107038 scopus 로고    scopus 로고
    • Transgenerational epigenetic inheritance: Prevalence, mechanisms, and implications for the study of heredity and evolution
    • E. Jablonka, and G. Raz Transgenerational epigenetic inheritance: prevalence, mechanisms, and implications for the study of heredity and evolution Q Rev Biol 84 2009 131 176
    • (2009) Q Rev Biol , vol.84 , pp. 131-176
    • Jablonka, E.1    Raz, G.2
  • 26
    • 15744401773 scopus 로고    scopus 로고
    • Eukaryotic cytosine methyltransferases
    • M.G. Goll, and T.H. Bestor Eukaryotic cytosine methyltransferases Annu Rev Biochem 74 2005 481 514
    • (2005) Annu Rev Biochem , vol.74 , pp. 481-514
    • Goll, M.G.1    Bestor, T.H.2
  • 28
    • 84876126685 scopus 로고    scopus 로고
    • Characterization of genome methylation patterns in the desert locust Schistocerca gregaria
    • C. Falckenhayn, B. Boerjan, G. Raddatz, M. Frohme, L. Schoofs, and F. Lyko Characterization of genome methylation patterns in the desert locust Schistocerca gregaria J Exp Biol 216 2013 1423 1429
    • (2013) J Exp Biol , vol.216 , pp. 1423-1429
    • Falckenhayn, C.1    Boerjan, B.2    Raddatz, G.3    Frohme, M.4    Schoofs, L.5    Lyko, F.6
  • 29
    • 0020476276 scopus 로고
    • The absence of detectable methylated bases in Drosophila melanogaster DNA
    • S. Urieli-Shoval, Y. Gruenbaum, J. Sedat, and A. Razin The absence of detectable methylated bases in Drosophila melanogaster DNA FEBS Lett 146 1982 148 152
    • (1982) FEBS Lett , vol.146 , pp. 148-152
    • Urieli-Shoval, S.1    Gruenbaum, Y.2    Sedat, J.3    Razin, A.4
  • 30
    • 0018418293 scopus 로고
    • Absence of cytosine methylation at C-C-G-G and G-C-G-C sites in the rDNA coding regions and intervening sequences of Drosophila and the rDNA of other higher insects
    • P.M.M. Rae, and R.E. Steele Absence of cytosine methylation at C-C-G-G and G-C-G-C sites in the rDNA coding regions and intervening sequences of Drosophila and the rDNA of other higher insects Nucl Acids Res 6 1979 2987 2995
    • (1979) Nucl Acids Res , vol.6 , pp. 2987-2995
    • Rae, P.M.M.1    Steele, R.E.2
  • 31
    • 41949090434 scopus 로고    scopus 로고
    • The genome of the model beetle and pest Tribolium castaneum
    • Tribolium Genome Sequencing Consortium
    • Tribolium Genome Sequencing Consortium The genome of the model beetle and pest Tribolium castaneum Nature 452 2008 949 955
    • (2008) Nature , vol.452 , pp. 949-955
  • 35
    • 84866081028 scopus 로고    scopus 로고
    • Divergent whole-genome methylation maps of human and chimpanzee brains reveal epigenetic basis of human regulatory evolution
    • J. Zeng, G. Konopka, G. Hunt Brendan, M. Preuss Todd, D. Geschwind, and V. Yi Soojin Divergent whole-genome methylation maps of human and chimpanzee brains reveal epigenetic basis of human regulatory evolution Am J Hum Genet 91 2012 455 465
    • (2012) Am J Hum Genet , vol.91 , pp. 455-465
    • Zeng, J.1    Konopka, G.2    Hunt Brendan, G.3    Preuss Todd, M.4    Geschwind, D.5    Yi Soojin, V.6
  • 37
    • 77952355762 scopus 로고    scopus 로고
    • Genome-wide evolutionary analysis of eukaryotic DNA methylation
    • A. Zemach, I.E. McDaniel, P. Silva, and D. Zilberman Genome-wide evolutionary analysis of eukaryotic DNA methylation Science 328 2010 916 919
    • (2010) Science , vol.328 , pp. 916-919
    • Zemach, A.1    McDaniel, I.E.2    Silva, P.3    Zilberman, D.4
  • 38
    • 84870552401 scopus 로고    scopus 로고
    • Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules
    • T.K. Kelly, Y. Liu, F.D. Lay, G. Liang, B.P. Berman, and P.A. Jones Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules Genome Res 22 2012 2497 2506
    • (2012) Genome Res , vol.22 , pp. 2497-2506
    • Kelly, T.K.1    Liu, Y.2    Lay, F.D.3    Liang, G.4    Berman, B.P.5    Jones, P.A.6
  • 40
    • 84877108379 scopus 로고    scopus 로고
    • DNA-methylation effect on co-transcriptional splicing is dependent on GC-architecture of the exon-intron structure
    • S. Gelfman, N. Cohen, A. Yearim, and G. Ast DNA-methylation effect on co-transcriptional splicing is dependent on GC-architecture of the exon-intron structure Genome Res 23 2013 789 799
    • (2013) Genome Res , vol.23 , pp. 789-799
    • Gelfman, S.1    Cohen, N.2    Yearim, A.3    Ast, G.4
  • 41
    • 84887214395 scopus 로고    scopus 로고
    • Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition
    • A.K. Maunakea, I. Chepelev, K. Cui, and K. Zhao Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition Cell Res 23 2013 1256 1269
    • (2013) Cell Res , vol.23 , pp. 1256-1269
    • Maunakea, A.K.1    Chepelev, I.2    Cui, K.3    Zhao, K.4
  • 42
    • 79961081499 scopus 로고    scopus 로고
    • DNA methylation regulates phenotype-dependent transcriptional activity in Candida albicans
    • P.K. Mishra, M. Baum, and J. Carbon DNA methylation regulates phenotype-dependent transcriptional activity in Candida albicans Proc Natl Acad Sci USA 108 2011 11965 11970
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 11965-11970
    • Mishra, P.K.1    Baum, M.2    Carbon, J.3
  • 45
    • 33845880624 scopus 로고    scopus 로고
    • Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
    • D. Zilberman, M. Gehring, R.K. Tran, T. Ballinger, and S. Henikoff Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription Nat Genet 39 2007 61 69
    • (2007) Nat Genet , vol.39 , pp. 61-69
    • Zilberman, D.1    Gehring, M.2    Tran, R.K.3    Ballinger, T.4    Henikoff, S.5
  • 47
    • 84880871509 scopus 로고    scopus 로고
    • The function of intragenic DNA methylation: Insights from insect epigenomes
    • B.G. Hunt, K.M. Glastad, S.V. Yi, and M.A.D. Goodisman The function of intragenic DNA methylation: insights from insect epigenomes Integr Comp Biol 53 2013 319 328
    • (2013) Integr Comp Biol , vol.53 , pp. 319-328
    • Hunt, B.G.1    Glastad, K.M.2    Yi, S.V.3    Goodisman, M.A.D.4
  • 48
    • 84881530204 scopus 로고    scopus 로고
    • DNA methylation, H2A.Z, and the regulation of constitutive expression
    • D. Coleman-Derr, and D. Zilberman DNA methylation, H2A.Z, and the regulation of constitutive expression Cold Spring Harb Symp Quant Biol 77 2012 147 154
    • (2012) Cold Spring Harb Symp Quant Biol , vol.77 , pp. 147-154
    • Coleman-Derr, D.1    Zilberman, D.2
  • 49
    • 55549141877 scopus 로고    scopus 로고
    • Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
    • D. Zilberman, D. Coleman-Derr, T. Ballinger, and S. Henikoff Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks Nature 456 2008 125 129
    • (2008) Nature , vol.456 , pp. 125-129
    • Zilberman, D.1    Coleman-Derr, D.2    Ballinger, T.3    Henikoff, S.4
  • 51
    • 84868122260 scopus 로고    scopus 로고
    • Deposition of histone variant H2A.Z within gene bodies regulates responsive genes
    • D. Coleman-Derr, and D. Zilberman Deposition of histone variant H2A.Z within gene bodies regulates responsive genes PLoS Genet 8 2012 e1002988
    • (2012) PLoS Genet , vol.8 , pp. 1002988
    • Coleman-Derr, D.1    Zilberman, D.2


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