Heat shock factor HSFB2a involved in gametophyte development of Arabidopsis thaliana and its expression is controlled by a heat-inducible long non-coding antisense RNA

Plant Molecular Biology

Volumn 85, Issue 6, 2014, Pages 541-550

  Wunderlich, Markus ^a   Groß Hardt, Rita ^a   Schöffl, Friedrich ^a  

^a UNIVERSITY OF TÜBINGEN   (Germany)

Author keywords

Antisense RNA; Arabidopsis thaliana; Gametophyte development; Heat shock factor; HSFB2a

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; SUBGROUP B;

ARABIDOPSIS PROTEIN; HSFB2A PROTEIN, ARABIDOPSIS; LONG UNTRANSLATED RNA; PLANT RNA; TRANSCRIPTION FACTOR;

ARABIDOPSIS; ARTICLE; FERTILITY; FLOWER; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; HEAT SHOCK RESPONSE; METABOLISM; PHYSIOLOGY; SEEDLING;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; FERTILITY; GENE EXPRESSION REGULATION, PLANT; GERM CELLS, PLANT; HEAT-SHOCK RESPONSE; RNA, LONG NONCODING; RNA, PLANT; SEEDLING; TRANSCRIPTION FACTORS;

EID: 84904556580     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-014-0202-0     Document Type: Article

References (44)

1. Bechtold N, Ellis J, Pelletier G (1993) In-planta agrobacterium-mediated gene-transfer by infiltration of adult Arabidopsis thaliana plants. Comptes Rendus De L Academie Des Sciences Serie Iii-Sciences De La Vie-Life Sciences 316: 1194-1199.
2. Begum T, Reuter R, Schöffl F (2012) Overexpression of AtHsfB4 induces specific effects on root development of Arabidopsis. Mech Dev 130: 54-60.
3. Beisel C, Buness A, Roustan-Espinosa IM, Koch B, Schmitt S, Haas SA, Hild M, Katsuyama T, Paro R (2007) Comparing active and repressed expression states of genes controlled by the Polycomb/Trithorax group proteins. Proc Natl Acad Sci 104: 16615-16620.
4. Busch W, Wunderlich M, Schöffl F (2005) Identification of novel heat shock factor-dependent genes and biochemical pathways in Arabidopsis thaliana. Plant J 41: 1-14.
5. Chauhan H, Khurana N, Agarwal P, Khurana P (2011) Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress. Mol Genet Genomics 286: 171-187.
6. Chen P-Y, Wang C-K, Soong S-C, To K-Y (2003) Complete sequence of the binary vector pBI121 and its application in cloning T-DNA insertion from transgenic plants. Mol Breed 11: 287-293.
7. Czarnecka-Verner E, Pan S, Salem T, Gurley W (2004) Plant class B HSFs inhibit transcription and exhibit affinity for TFIIB and TBP. Plant Mol Biol 56: 57-75.
8. Döring P, Treuter E, Kistner C, Lyck R, Chen A, Nover L (2000) The role of AHA motifs in the activator function of tomato heat stress transcription factors HsfA1 and HsfA2. Plant Cell Online 12: 265-278.
9. Drews GN, Yadegari R (2002) Development and function of the angiosperm female gametophyte. Annu Rev Genet 36: 99-124.
10. Drews GN, Lee D, Christensen CA (1998) Genetic analysis of female gametophyte development and function. Plant Cell Online 10: 5-17.
11. Gagliardi D, Breton C, Chaboud A, Vergne P, Dumas C (1995) Expression of heat shock factor and heat shock protein 70 genes during maize pollen development. Plant Mol Biol 29: 841-856.
12. Guo J, Wu J, Ji Q, Wang C, Luo L, Yuan Y, Wang Y, Wang J (2008) Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis. J Genet Genomics 35: 105-118.
13. Helliwell CA, Robertson M, Finnegan EJ, Buzas DM, Dennis ES (2011) Vernalization-repression of Arabidopsis FLC requires promoter sequences but not antisense transcripts. PLoS One 6: e21513.
14. Ikeda M, Ohme-Takagi M (2009) A novel group of transcriptional repressors in Arabidopsis. Plant Cell Physiol 50: 970-975.
15. Ikeda M, Mitsuda N, Ohme-Takagi M (2011) Arabidopsis HsfB1 and HsfB2b act as repressors of the expression of heat-inducible Hsfs but positively regulate the acquired thermotolerance. Plant Physiol 157: 1243-1254.
16. Jiang L, Yuan L, Xia M, Makaroff CA (2010) Proper levels of the Arabidopsis cohesion establishment factor CTF7 are essential for embryo and megagametophyte, but not endosperm, development. Plant Physiol 154: 820-832.
17. Kägi C, Baumann N, Nielsen N, Stierhof Y-D, Groß-Hardt, R (2010) The gametic central cell of Arabidopsis determines the lifespan of adjacent accessory cells. Proc Natl Acad Sci USA 107: 22350-22355.
18. Kotak S, Vierling E, Bäumlein H, von Koskull-Döring P (2007) A novel transcriptional cascade regulating expression of heat stress proteins during seed development of Arabidopsis. Plant Cell Online 19: 182-195.
19. Kumar M, Busch W, Birke H, Kemmerling B, Nürnberger T, Schöffl F (2009) Heat shock factors HsfB1 and HsfB2b are involved in the regulation of Pdf1. 2 expression and pathogen resistance in arabidopsis. Mol Plant 2: 152-165.
20. Li N, Yuan L, Liu N, Shi D, Li X, Tang Z, Liu J, Sundaresan V, Yang W-C (2009) SLOW WALKER2, a NOC1/MAK21 homologue, is essential for coordinated cell cycle progression during female gametophyte development in Arabidopsis. Plant Physiol 151: 1486-1497.
21. Lin Y-X, Jiang H-Y, Chu Z-X, Tang X-L, Zhu S-W, Cheng B-J (2011) Genome-wide identification, classification and analysis of heat shock transcription factor family in maize. BMC Genomics 12: 76.
22. Liu Y-G, Mitsukawa N, Vazquez-Tello A, Whittier RF (1995) Generation of a high-quality P1 library of Arabidopsis suitable for chromosome walking. Plant J 7: 351-358.
23. Liu J, Zhang Y, Qin G, Tsuge T, Sakaguchi N, Luo G, Sun K, Shi D, Aki S, Zheng N, Aoyama T, Oka A, Yang W, Umeda M, Xie Q, Gu H, Qu L-J (2008) Targeted degradation of the cyclin-dependent kinase inhibitor ICK4/KRP6 by RING-type E3 ligases is essential for mitotic cell cycle progression during Arabidopsis gametogenesis. Plant Cell Online 20: 1538-1554.
24. Liu M, Shi D-Q, Yuan L, Liu J, Yang W-C (2010) SLOW WALKER3, encoding a putative DEAD-box RNA helicase, is essential for female gametogenesis in Arabidopsis. J Integr Plant Biol 52: 817-828.
25. Liu H-C, Liao H-T, Charng Y-Y (2011) The role of class A1 heat shock factors (HSFA1s) in response to heat and other stresses in Arabidopsis. Plant Cell Environ 34: 738-751.
26. Moore JM, Vielle Calzada J-P, Gagliano W, Grossniklaus U (1997) Genetic characterization of hadad, a mutant disrupting female gametogenesis in Arabidopsis thaliana. Cold Spring Harb Symp Quant Biol 62: 35-47.
27. Nover L, Bharti K, Döring P, Mishra SK, Ganguli A, Scharf K-D (2001) Arabidopsis and the heat stress transcription factor world: how many heat stress transcription factors do we need? Cell Stress Chaperones 6: 177-189.
28. Page DR, Grossniklaus U (2002) The art and design of genetic screens: Arabidopsis thaliana. Nat Rev Genet 3: 124-136.
29. Pernas M, Ryan E, Dolan L (2010) SCHIZORIZA controls tissue system complexity in plants. Curr Biol 20: 818-823.
30. Roszak P, Köhler C (2011) Polycomb group proteins are required to couple seed coat initiation to fertilization. Proc Natl Acad Sci 108: 20826-20831.
31. Scharf K-D, Berberich T, Ebersberger I, Nover L (2012) The plant heat stress transcription factor (Hsf) family: structure, function and evolution. Biochim Biophys Acta 1819: 104-119.
32. Schöffl F, Prändl R, Reindl A (1998) Regulation of the heat-shock response. Plant Physiol 117: 1135-1141.
33. Schuettengruber B, Chourrout D, Vervoort M, Leblanc B, Cavalli G (2007) Genome regulation by polycomb and trithorax proteins. Cell 128: 735-745.
34. Shi D-Q, Liu J, Xiang Y-H, Ye D, Sundaresan V, Yang W-C (2005) SLOW WALKER1, essential for gametogenesis in Arabidopsis, encodes a WD40 protein involved in 18S ribosomal RNA biogenesis. Plant Cell Online 17: 2340-2354.
35. Shilatifard A (2008) Molecular implementation and physiological roles for histone H3 lysine 4 (H3K4) methylation. Curr Opin Cell Biol 20: 341-348.
36. Smyth DR, Bowman JL, Meyerowitz EM (1990) Early flower development in Arabidopsis. Plant Cell Online 2: 755-767.
37. Swiezewski S, Liu F, Magusin A, Dean C (2009) Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target. Nature 462: 799-802.
38. ten Hove CA, Willemsen V, de Vries WJ, van Dijken A, Scheres B, Heidstra R (2010) SCHIZORIZA encodes a nuclear factor regulating asymmetry of stem cell divisions in the Arabidopsis root. Curr Biol 20: 452-457.
39. Wang KevinC, Chang HowardY (2011) Molecular mechanisms of long noncoding RNAs. Mol Cell 43: 904-914.
40. Wollmann H, Mica E, Todesco M, Long JA, Weigel D (2010) On reconciling the interactions between APETALA2, miR172 and AGAMOUS with the ABC model of flower development. Development 137: 3633-3642.
41. Xiang C, Han P, Lutziger I, Wang K, Oliver D (1999) A mini binary vector series for plant transformation. Plant Mol Biol 40: 711-717.
42. Yadegari R, Paiva G, Laux T, Koltunow AM, Apuya N, Zimmerman JL, Fischer RL, Harada JJ, Goldberg RB (1994) Cell differentiation and morphogenesis are uncoupled in Arabidopsis raspberry embryos. Plant Cell Online 6: 1713-1729.
43. Yoshida T, Ohama N, Nakajima J, Kidokoro S, Mizoi J, Nakashima K, Maruyama K, Kim J-M, Seki M, Todaka D, Osakabe Y, Sakuma Y, Schöffl F, Shinozaki K, Yamaguchi-Shinozaki K (2011) Arabidopsis HsfA1 transcription factors function as the main positive regulators in heat shock-responsive gene expression. Mol Genet Genomics 286: 321-332.
44. Zhu X, Thalor SK, Takahashi Y, Berberich T, Kusano T (2012) An inhibitory effect of the sequence-conserved upstream open-reading frame on the translation of the main open-reading frame of HsfB1 transcripts in Arabidopsis. Plant Cell Environ 35: 2014-2030.