Protein structural class prediction via k-separated bigrams using position specific scoring matrix

Journal of Advanced Computational Intelligence and Intelligent Informatics

Volumn 18, Issue 4, 2014, Pages 474-479

  Saini, Harsh ^a   Raicar, Gaurav ^a   Sharma, Alok ^a,b   Lal, Sunil ^a   Dehzangi, Abdollah ^b   Ananthanarayanan, Rajeshkannan ^a   Lyons, James ^b   Biswas, Neela ^c   Paliwal, Kuldip K ^b  

^a UNIVERSITY OF THE SOUTH PACIFIC   (Fiji)

^b GRIFFITH UNIVERSITY   (Australia)

^c ROYAL BRISBANE AND WOMEN'S HOSPITAL   (Australia)

Author keywords

Bigram; K separated bigram; PSSM; SCOP; Structural class prediction; SVM; Transition probabilities

Indexed keywords

FEATURE EXTRACTION; FORECASTING; SEPARATION;

BIGRAM; PSSM; SCOP; STRUCTURAL CLASS; TRANSITION PROBABILITIES;

PROTEINS;

EID: 84904546240     PISSN: 13430130     EISSN: 18838014     Source Type: Journal    
DOI: 10.20965/jaciii.2014.p0474     Document Type: Article

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