Identification of genes involved in carbon metabolism from Eleusine coracana (L.) for understanding their light-mediated entrainment and regulation

Plant Cell Reports

Volumn 33, Issue 8, 2014, Pages 1403-1411

  Kanwal, Pooja ^a   Gupta, Supriya ^a   Arora, Sandeep ^a   Kumar, Anil ^a  

^a G B PANT UNIVERSITY OF AGRICULTURE AND TECHNOLOGY   (India)

Author keywords

Carbon metabolism; Dof1; Eleusine coracana; Light regulated gene expression; Nitrogen use efficiency

Indexed keywords

ELEUSINE CORACANA;

CARBON; NITROGEN; PLANT RNA; PRIMER DNA; VEGETABLE PROTEIN;

CIRCADIAN RHYTHM; CROP; DARKNESS; ELEUSINE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; GENOTYPE; LIGHT; METABOLISM; MOLECULAR GENETICS; PHOTOSYNTHESIS; PHYLOGENY; PHYSIOLOGY; PLANT SEED; RADIATION RESPONSE; SEEDLING;

CARBON; CIRCADIAN RHYTHM; CROPS, AGRICULTURAL; DARKNESS; DNA PRIMERS; ELEUSINE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GENOTYPE; LIGHT; METABOLIC NETWORKS AND PATHWAYS; MOLECULAR SEQUENCE ANNOTATION; NITROGEN; PHOTOSYNTHESIS; PHYLOGENY; PLANT PROTEINS; RNA, PLANT; SEEDLING; SEEDS;

EID: 84904541481     PISSN: 07217714     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00299-014-1625-4     Document Type: Article

References (25)

1. 2 enrichment (FACE)? A meta-analytic review of the responses of photosynthesis, canopy. New Phytol 165: 351-371.
2. Baena-Gonzalez E, Sheen J (2008) Convergent energy and stress signaling. Trends Plant Sci 13: 474-482.
3. Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K (2005) Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J 42: 567-585.
4. Contento AL, Kim S-J, Bassham DC (2004) Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation. Plant Physiol 135: 2330-2347.
5. Fu H, Subramanian RR, Masters SC (2000) 14-3-3 Proteins: structure, function, and regulation. Annu Rev Pharmacol Toxicol 40: 617-647.
6. Gupta N, Gupta AK, Kumar A (2011) Spatial distribution pattern analysis of Dof1 transcription factor in different tissues of three Eleusine coracana genotypes differing in their grain protein, yield and photosynthetic efficiency. Mol Biol Rep 39: 2089-2095.
7. Gupta AK, Gaur VS, Gupta S, Kumar A (2013) Nitrate signals determine the sensing of nitrogen through differential expression of genes involved in nitrogen uptake and assimilation in finger millet. Funct Integr Genomics 13: 179-190.
8. Hayes KR, Beatty M, Meng X, Simmons CR, Habben JE, Danilevskaya ON (2010) Maize global transcriptomics reveals spervasive leaf diurnal rhythms but rhythms in developing ears are largely limited to the core oscillator. PLoS One 5(9): 12887.
9. Hotta CT, Gardner MJ, Hubbard KE, Baek SJ, Dalchau N, Suhita D (2007) Modulation of environmental responses of plants by circadian clocks. Plant Cell Environ 30: 333-349.
10. Kumar R, Taware R, Gaur VS, Guru SK, Kumar A (2009) Influence of nitrogen on the expression of TaDof1 transcription factor in wheat and its relationship with photo synthetic and ammonium assimilating efficiency. Mol Biol Rep 36: 2209-2220.
11. Kumar A, Kanwal P, Gupta AK, Singh BR, Gaur VS (2013) A full-length Dof1 transcription factor of finger millet and its response to a circadian cycle. Plant Mol Biol Rep 32: 419-427. doi: 10. 1007/s11105-013-0653-5.
12. McClung CR (2001) Circadian rhythms in plants. Annu Rev Plant Physiol Plant Mol Biol 52: 139-162.
13. Millar AJ (2004) Input signals to the plant circadian clock. J Exp Bot 55: 277-283.
14. Miyao M (2003) Molecular evolution and genetic engineering of C4 photosynthetic enzymes. J Exp Bot 381: 179-189.
15. Schultz TF, Kiyosue T, Yanovsky M, Wada M, Kay SA (2001) A role for LKP2 in the circadian clock of Arabidopsis. Plant Cell 13: 2659-2670.
16. 4 gene expression. Ann Rev Pl Physiol Pl Mol Biol 50: 187-217.
17. Sinclair TR, Purcell LC, Sneller CH (2004) Crop transformation and the challenge to increase yield potential. Trends in Plant Sci 9: 70-75.
18. Stayton M, Brosio P, Dunsmuir P (1989) Photosynthetic genes of petunia (Mitchell) are differentially expressed during the diurnal cycle. Plant Physiol 89: 776-782.
19. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
20. 3 upland rice and its photosynthesis characteristics analysis. African J Biotechnol 7: 783-787.
21. Yanagisawa S, Sheen J (1998) Involvement of maize Dof zinc finger proteins in tissue-specific and light-regulated gene expression. Plant Cell 10: 75-89.
22. Yanagisawa S, Akiyama A, Kisaka H, Uchimiya H, Miwa T (2004) Metabolic engineering with Dof1 transcription factor in plants: improved nitrogen assimilation and growth under low-nitrogen conditions. PNAS USA 101: 7833-7838.
23. Yang X, Lee WH, Sobott F, Papagrigoriou E, Robinson CV, Grossmann JG, Sundstrom M, Doyle DA, Elkins JM (2006) Structural basis for protein-protein interactions in the 14-3-3 protein family PNAS USA. Proc Natl Acad Sci USA 103: 17237-17242.
24. Yang J, Yang MF, Wang D, Chen F, Shen SH (2010) Jcdof1, a Dof transcription factor gene is associated with the light mediated circadian clock in Jatropha curcas. Physiol Plant 139: 324-334.
25. Yang J, Yang MF, Zhan WP, Chen F, Shen SH (2011) A putative flowering-time-related Dof transcription factor gene, JcDof3, is controlled by the circadian clock in Jatropha curcas. Plant Sci 181: 667-674.