A putative flowering-time-related Dof transcription factor gene, JcDof3, is controlled by the circadian clock in Jatropha curcas

Plant Science

Volumn 181, Issue 6, 2011, Pages 667-674

  Yang, Jing ^a,b   Yang, Ming Feng ^a   Zhang, Wen Peng ^a   Chen, Fan ^c   Shen, Shi Hua ^a  

^a INSTITUTE OF BOTANY   (China)

^b NORTH UNIVERSITY OF CHINA   (China)

^c INSTITUTE OF GENETICS AND DEVELOPMENTAL BIOLOGY   (China)

Author keywords

Circadian clock; Dof; Flowering; Jatropha curcas; Transcription factor

Indexed keywords

BIOFUEL; PLANT DNA; TRANSCRIPTION FACTOR;

AMINO ACID SEQUENCE; ARTICLE; CIRCADIAN RHYTHM; DNA SEQUENCE; FLOWER; GENETICS; JATROPHA; METABOLISM; MOLECULAR GENETICS; PHOTOPERIODICITY; PHYSIOLOGY; TRANSCRIPTION INITIATION; TWO HYBRID SYSTEM;

AMINO ACID SEQUENCE; BIOFUELS; CIRCADIAN CLOCKS; DNA, PLANT; FLOWERS; JATROPHA; MOLECULAR SEQUENCE DATA; PHOTOPERIOD; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION FACTORS; TRANSCRIPTIONAL ACTIVATION; TWO-HYBRID SYSTEM TECHNIQUES;

JATROPHA CURCAS;

EID: 80053223375     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2011.05.003     Document Type: Article

References (37)

1. Yeang H.Y. Circadian and solar clocks interact in seasonal flowering. Bioessays 2009, 31:1211-1218.
2. Suarez-Lopez P., Wheatley K., Robson F., Onouchi H., Valverde F., Coupland G. CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. Nature 2001, 410:1116-1120.
3. Yanovsky M.J., Kay S.A. Molecular basis of seasonal time measurement in Arabidopsis. Nature 2002, 419:308-312.
4. Mizoguchi T., Wright L., Fujiwara S., Cremer F., Lee K., Onouchi H., Mouradov A., Fowler S., Kamada H., Putterill J., Coupland G. Distinct roles of GIGANTEA in promoting flowering and regulating circadian rhythms in Arabidopsis. Plant Cell 2005, 17:2255-2270.
5. Sawa M., Nusinow D.A., Kay S.A., Imaizumi T. FKF1 and GIGANTEA complex formation is required for day-length measurement in Arabidopsis. Science 2007, 318:261-265.
6. Imaizumi T., Schultz T.F., Harmon F.G., Ho L.A., Kay S.A. FKF1 F-box protein mediates cyclic degradation of a repressor of CONSTANS in Arabidopsis. Science 2005, 309:293-297.
7. Fornara F., Panigrahi K.C.S., Gissot L., Sauerbrunn N., Ruhl M., Jarillo J.A., Coupland G. Arabidopsis DOF transcription factors act redundantly to reduce CONSTANS expression and are essential for a photoperiodic flowering response. Dev. Cell 2009, 17:75-86.
8. Hayama R., Yokoi S., Tamaki S., Yano M., Shimamoto K. Adaptation of photoperiodic control pathways produces short-day flowering in rice. Nature 2003, 422:719-722.
9. Gagne J.M., Downes B.P., Shiu S.H., Durski A.M., Vierstra R.D. The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A. 2002, 99:11519-11524.
10. Cardozo T., Pagano M. The SCF ubiquitin ligase: insights into a molecular machine. Nat. Rev. Mol. Cell Biol. 2004, 5:739-751.
11. Iwamoto M., Higo K., Takano M. Circadian clock- and phytochrome-regulated Dof-like gene, Rdd1, is associated with grain size in rice. Plant Cell Environ. 2009, 32:592-603.
12. Yang J, Yang M.F., Wang D., Chen F., Shen S.H. JcDof1, a Dof transcription factor gene, is associated with the light-mediated circadian clock in Jatropha curcas. Physiol. Plant. 2010, 139:324-334.
13. Lijavetzky D., Carbonero P., Vicente-Carbajosa J. Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families. BMC Evol. Biol. 2003, 3:1-11.
14. Yanagisawa S. A novel DNA-binding domain that may form a single zinc finger motif. Nucleic Acids Res. 1995, 23:3403-3410.
15. Yanagisawa S. The Dof family of plant transcription factors. Trends Plant Sci. 2002, 7:555-560.
16. Yanagisawa S., Sheen J. Involvement of maize Dof zinc finger proteins in tissue-specific and light-regulated gene expression. Plant Cell 1998, 10:75-89.
17. Yanagisawa S., Izui K. Molecular cloning of two DNA-binding proteins of maize that are structurally different but interact with the same sequence motif. J. Biol. Chem. 1993, 268:16028-16036.
18. Ward J.M., Cufr C.A., Denzel M.A., Neff M.M. The Dof transcription factor OBP3 modulates phytochrome and cryptochrome signaling in Arabidopsis. Plant Cell 2005, 17:475-485.
19. Li D., Yang C., Li X., Gan Q., Zhao X., Zhu L. Functional characterization of rice OsDof12. Planta 2009, 229:1159-1169.
20. Diaz I., Vicente-Carbajosa J., Abraham Z., Martinez M., Isabel-La Moneda I., Carbonero P. The GAMYB protein from barley interacts with the DOF transcription factor BPBF and activates endosperm-specific genes during seed development. Plant J. 2002, 29:453-464.
21. Wang H.W., Zhang B., Hao Y.J., Huang J., Tian A.G., Liao Y., Zhang J.S., Chen S.Y. The soybean Dof-type transcription factor genes, GmDof4 and GmDof11, enhance lipid content in the seeds of transgenic Arabidopsis plants. Plant J. 2007, 52:716-729.
22. Papi M., Sabatini S., Altamura M.M., Hennig L., Schafer E., Costantino P., Vittorioso P. Inactivation of the phloem-specific Dof zinc finger gene DAG1 affects response to light and integrity of the testa of Arabidopsis seeds. Plant Physiol. 2002, 128:411-417.
23. Park D.H., Lim P.O., Kim J.S., Cho D.S., Hong S.H., Nam H.G. The Arabidopsis COG1 gene encodes a Dof domain transcription factor and negatively regulates phytochrome signaling. Plant J. 2003, 34:161-171.
24. Diaz I., Martinez M., Isabel-LaMoneda I., Rubio-Somoza I., Carbonero P. The DOF protein, SAD, interacts with GAMYB in plant nuclei and activates transcription of endosperm-specific genesduring barley seed development. Plant J 2005, 42:652-662.
25. Moreno-Risueno M.A., Diaz I., Carrillo L., Fuentes R., Carbonero P. The HvDOF19 transcription factor mediates the abscisic acid-dependent repression of hydrolase genes in germinating barley aleurone. Plant J. 2007, 51:352-365.
26. Heller J. Physic Nut Jatropha curcas L. 1996, International Plant Genetic Resources Institute, p. 66, ISBN 92-9043-278-0.
27. Winkler E., Foidl N., Gubitz G.M., Staubmann R., Steiner W. Enzyme-supported oil extraction from Jatropha curcas seeds. Appl. Biochem. Biotechnol. 1997, 63-65:449-456.
28. Berchmans H.J., Hirata S. Biodiesel production from crude Jatropha curcas L. seed oil with a high content of free fatty acids. Bioresour. Technol. 2008, 99:1716-1721.
29. Openshaw K. A review of Jatropha curcas: an oil plant of unfulfilled promise. Biomass Bioenerg. 2000, 19:1-15.
30. Tang M., Sun J., Liu Y., Chen F., Shen S. Isolation and functional characterization of the JcERF gene, a putative AP2/EREBP domain-containing transcription factor, in the woody oil plant Jatropha curcas. Plant Mol. Biol. 2007, 63:419-428.
31. Moreno-Risueno M.A., Martinez M., Vicente-Carbajosa J., Carbonero P. The family of DOF transcription factors: from green unicellular algae to vascular plants. Mol. Genet. Genomics 2007, 277:379-390.
32. Imaizumi T. Arabidopsis circadian clock and photoperiodism: time to think about location. Curr. Opin. Plant Biol. 2010, 13:83-89.
33. Nelson D.C., Lasswell J., Rogg L.E., Cohen M.A., Bartel B. FKF1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis. Cell 2000, 101:331-340.
34. Somers D.E., Schultz T.F., Milnamow M., Kay S.A. ZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis. Cell 2000, 101:319-329.
35. Schultz T.F., Kiyosue T., Yanovsky M., Wada M., Kay S.A. A role for LKP2 in the circadian clock of Arabidopsis. Plant Cell 2001, 13:2659-2670.
36. Yasuhara M., Mitsui S., Hirano H., Takanabe R., Tokioka Y., Ihara N., Komatsu A., Seki M., Shinozaki K., Kiyosue T. Identification of ASK and clock-associated proteins as molecular partners of LKP2 (LOV kelch protein 2) in Arabidopsis. J. Exp. Bot. 2004, 55:2015-2027.
37. Mas P., Kim W.Y., Somers D.E., Kay S.A. Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana. Nature 2003, 426:567-570.