메뉴 건너뛰기




Volumn 35, Issue 9, 2014, Pages 4663-4677

Neonatal atlas construction using sparse representation

Author keywords

Brain atlases; Brain development; MRI template; Neonatal brain; Spatial normalization; Super resolution

Indexed keywords

ALGORITHM; ANATOMY AND HISTOLOGY; BOOK; BRAIN; EVALUATION STUDY; FEMALE; HUMAN; IMAGE PROCESSING; INFANT; MALE; NEWBORN; NUCLEAR MAGNETIC RESONANCE IMAGING; PROCEDURES; TIME;

EID: 84904513477     PISSN: 10659471     EISSN: 10970193     Source Type: Journal    
DOI: 10.1002/hbm.22502     Document Type: Article
Times cited : (36)

References (61)
  • 1
    • 34548832230 scopus 로고    scopus 로고
    • A fast diffeomorphic image registration algorithm
    • Ashburner J (2007): A fast diffeomorphic image registration algorithm. Neuroimage 38:95-113.
    • (2007) Neuroimage , vol.38 , pp. 95-113
    • Ashburner, J.1
  • 2
    • 60149092507 scopus 로고    scopus 로고
    • Computing average shaped tissue probability templates
    • Ashburner J, Friston KJ (2009): Computing average shaped tissue probability templates. Neuroimage 45:333-341.
    • (2009) Neuroimage , vol.45 , pp. 333-341
    • Ashburner, J.1    Friston, K.J.2
  • 6
    • 0003724754 scopus 로고
    • Vergleichende Lokalisationslehre der Grosshirnrinde in ihren Prinzipien dargestellt auf Grund des Zellenbaues
    • Brodmann K (1909): Vergleichende Lokalisationslehre der Grosshirnrinde in ihren Prinzipien dargestellt auf Grund des Zellenbaues. Germany: Barth Leipzig.
    • (1909) Germany: Barth Leipzig
    • Brodmann, K.1
  • 8
    • 78649673803 scopus 로고    scopus 로고
    • Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation
    • Coupé P, Manjón JV, Fonov V, Pruessner J, Robles M, Collins DL (2011): Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation. Neuroimage 54:940-954.
    • (2011) Neuroimage , vol.54 , pp. 940-954
    • Coupé, P.1    Manjón, J.V.2    Fonov, V.3    Pruessner, J.4    Robles, M.5    Collins, D.L.6
  • 14
    • 0036425968 scopus 로고    scopus 로고
    • Improved optimization for the robust and accurate linear registration and motion correction of brain images
    • Jenkinson M, Bannister P, Brady M, Smith S (2002): Improved optimization for the robust and accurate linear registration and motion correction of brain images. Neuroimage 17:825-841.
    • (2002) Neuroimage , vol.17 , pp. 825-841
    • Jenkinson, M.1    Bannister, P.2    Brady, M.3    Smith, S.4
  • 15
    • 7044260966 scopus 로고    scopus 로고
    • Unbiased diffeomorphic atlas construction for computational anatomy
    • Joshi S, Davis B, Jomier M, Gerig G (2004): Unbiased diffeomorphic atlas construction for computational anatomy. Neuroimage 23:151-160.
    • (2004) Neuroimage , vol.23 , pp. 151-160
    • Joshi, S.1    Davis, B.2    Jomier, M.3    Gerig, G.4
  • 18
    • 41449115925 scopus 로고    scopus 로고
    • Automatic segmentation of the prostate in 3D MR images by atlas matching using localized mutual information
    • Klein S, van der Heide UA, Lips IM, van Vulpen M, Staring M, Pluim JP (2008): Automatic segmentation of the prostate in 3D MR images by atlas matching using localized mutual information. Med Phys 35:1407-1417.
    • (2008) Med Phys , vol.35 , pp. 1407-1417
    • Klein, S.1    van der Heide, U.A.2    Lips, I.M.3    van Vulpen, M.4    Staring, M.5    Pluim, J.P.6
  • 21
    • 84866941397 scopus 로고    scopus 로고
    • Establishing a normative atlas of the human lung: computing the average transformation and atlas construction
    • Li B, Christensen GE, Hoffman EA, McLennan G, Reinhardt JM (2012): Establishing a normative atlas of the human lung: computing the average transformation and atlas construction. Acad Radiol 19:1368-1381.
    • (2012) Acad Radiol , vol.19 , pp. 1368-1381
    • Li, B.1    Christensen, G.E.2    Hoffman, E.A.3    McLennan, G.4    Reinhardt, J.M.5
  • 22
    • 80053145416 scopus 로고    scopus 로고
    • Multi-task feature learning via efficient l2,1-norm minimization. In Proceedings of the Twenty-Fifth Conference on Uncertainty in Artificial Intelligence - AUAI Press.
    • Liu J, Ji S, Ye J (2009): Multi-task feature learning via efficient l2, 1-norm minimization. In Proceedings of the Twenty-Fifth Conference on Uncertainty in Artificial Intelligence, pp. 339-348. AUAI Press.
    • (2009) , pp. 339-348
    • Liu, J.1    Ji, S.2    Ye, J.3
  • 23
    • 0029043654 scopus 로고
    • A probabilistic atlas of the human brain: theory and rationale for its development. The International Consortium for Brain Mapping (ICBM)
    • Mazziotta JC, Toga AW, Evans A, Fox P, Lancaster J (1995): A probabilistic atlas of the human brain: theory and rationale for its development. The International Consortium for Brain Mapping (ICBM). Neuroimage 2:89-101.
    • (1995) Neuroimage , vol.2 , pp. 89-101
    • Mazziotta, J.C.1    Toga, A.W.2    Evans, A.3    Fox, P.4    Lancaster, J.5
  • 24
    • 0036856374 scopus 로고    scopus 로고
    • Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data
    • McShane LM, Radmacher MD, Freidlin B, Yu R, Li M-C, Simon R (2002): Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data. Bioinformatics 18:1462-1469.
    • (2002) Bioinformatics , vol.18 , pp. 1462-1469
    • McShane, L.M.1    Radmacher, M.D.2    Freidlin, B.3    Yu, R.4    Li, M.-C.5    Simon, R.6
  • 25
    • 22144493784 scopus 로고    scopus 로고
    • Increasing the power of functional maps of the medial temporal lobe by using large deformation diffeomorphic metric mapping
    • Miller MI, Beg MF, Ceritoglu C, Stark C (2005): Increasing the power of functional maps of the medial temporal lobe by using large deformation diffeomorphic metric mapping. Proc Natl Acad Sci USA 102:9685-9690.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 9685-9690
    • Miller, M.I.1    Beg, M.F.2    Ceritoglu, C.3    Stark, C.4
  • 27
    • 84861414424 scopus 로고    scopus 로고
    • Within-subject template estimation for unbiased longitudinal image analysis
    • Reuter M, Schmansky NJ, Rosas HD, Fischl B (2012): Within-subject template estimation for unbiased longitudinal image analysis. Neuroimage 61:1402-1418.
    • (2012) Neuroimage , vol.61 , pp. 1402-1418
    • Reuter, M.1    Schmansky, N.J.2    Rosas, H.D.3    Fischl, B.4
  • 30
    • 0036880516 scopus 로고    scopus 로고
    • HAMMER: Hierarchical attribute matching mechanism for elastic registration
    • Shen D, Davatzikos C (2002): HAMMER: Hierarchical attribute matching mechanism for elastic registration. IEEE Trans Med Imaging 21:1421-1439.
    • (2002) IEEE Trans Med Imaging , vol.21 , pp. 1421-1439
    • Shen, D.1    Davatzikos, C.2
  • 31
    • 84872518384 scopus 로고    scopus 로고
    • Atlas construction via dictionary learning and group sparsity. In Medical Image Computing and Computer-Assisted Intervention-MICCAI -, Springer, Berlin Heidelberg.
    • Shi F, Wang L, Wu G, Zhang Y, Liu M, Gilmore JH, Lin W, Shen D (2012): Atlas construction via dictionary learning and group sparsity. In Medical Image Computing and Computer-Assisted Intervention-MICCAI, pp. 247-255, Springer, Berlin Heidelberg.
    • (2012) , pp. 247-255
    • Shi, F.1    Wang, L.2    Wu, G.3    Zhang, Y.4    Liu, M.5    Gilmore, J.H.6    Lin, W.7    Shen, D.8
  • 33
    • 84863506007 scopus 로고    scopus 로고
    • LABEL: Pediatric brain extraction using learning-based meta-algorithm
    • Shi F, Wang L, Dai Y, Gilmore JH, Lin W, Shen D (2012): LABEL: Pediatric brain extraction using learning-based meta-algorithm. Neuroimage 62:1975-1986.
    • (2012) Neuroimage , vol.62 , pp. 1975-1986
    • Shi, F.1    Wang, L.2    Dai, Y.3    Gilmore, J.H.4    Lin, W.5    Shen, D.6
  • 35
    • 0031987382 scopus 로고    scopus 로고
    • A nonparametric method for automatic correction of intensity nonuniformity in MRI data
    • Sled JG, Zijdenbos AP, Evans AC (1998): A nonparametric method for automatic correction of intensity nonuniformity in MRI data. IEEE Trans Med Imaging 17:87-97.
    • (1998) IEEE Trans Med Imaging , vol.17 , pp. 87-97
    • Sled, J.G.1    Zijdenbos, A.P.2    Evans, A.C.3
  • 36
    • 20344381603 scopus 로고    scopus 로고
    • An uncertainty-driven hybrid of intensity-based and feature-based registration with application to retinal and lung CT images. In Medical Image Computing and Computer-Assisted Intervention-MICCAI 2004 - Springer Berlin Heidelberg.
    • Stewart C, Lee Y-L, Tsai C-L (2004): An uncertainty-driven hybrid of intensity-based and feature-based registration with application to retinal and lung CT images. In Medical Image Computing and Computer-Assisted Intervention-MICCAI 2004, pp. 870-877. Springer Berlin Heidelberg.
    • (2004) , pp. 870-877
    • Stewart, C.1    Lee, Y.-L.2    Tsai, C.-L.3
  • 38
    • 85194972808 scopus 로고    scopus 로고
    • Regression shrinkage and selection via the lasso
    • Tibshirani R (1996): Regression shrinkage and selection via the lasso. J R Statist Soc 58:267-288.
    • (1996) J R Statist Soc , vol.58 , pp. 267-288
    • Tibshirani, R.1
  • 39
  • 40
    • 63849264858 scopus 로고    scopus 로고
    • Diffeomorphic demons: Efficient non-parametric image registration
    • Vercauteren T, Pennec X, Perchant A, Ayache N (2009): Diffeomorphic demons: Efficient non-parametric image registration. Neuroimage 45:S61-S72.
    • (2009) Neuroimage , vol.45
    • Vercauteren, T.1    Pennec, X.2    Perchant, A.3    Ayache, N.4
  • 41
    • 0034681515 scopus 로고    scopus 로고
    • Sparse coding and decorrelation in primary visual cortex during natural vision
    • Vinje WE, Gallant JL (2000): Sparse coding and decorrelation in primary visual cortex during natural vision. Science 287:1273-1276.
    • (2000) Science , vol.287 , pp. 1273-1276
    • Vinje, W.E.1    Gallant, J.L.2
  • 42
    • 80052159689 scopus 로고    scopus 로고
    • Automatic segmentation of neonatal images using convex optimization and coupled level sets
    • Wang L, Shi F, Lin W, Gilmore JH, Shen D (2011): Automatic segmentation of neonatal images using convex optimization and coupled level sets. Neuroimage 58:805-817.
    • (2011) Neuroimage , vol.58 , pp. 805-817
    • Wang, L.1    Shi, F.2    Lin, W.3    Gilmore, J.H.4    Shen, D.5
  • 43
    • 67349126887 scopus 로고    scopus 로고
    • Automatic segmentation of newborn brain MRI
    • Weisenfeld NI, Warfield SK (2009): Automatic segmentation of newborn brain MRI. Neuroimage 47:564-572.
    • (2009) Neuroimage , vol.47 , pp. 564-572
    • Weisenfeld, N.I.1    Warfield, S.K.2
  • 44
    • 79957521924 scopus 로고    scopus 로고
    • SharpMean: groupwise registration guided by sharp mean image and tree-based registration
    • Wu G, Jia H, Wang Q, Shen D (2011): SharpMean: groupwise registration guided by sharp mean image and tree-based registration. Neuroimage 56:1968-1981.
    • (2011) Neuroimage , vol.56 , pp. 1968-1981
    • Wu, G.1    Jia, H.2    Wang, Q.3    Shen, D.4
  • 45
    • 84862907523 scopus 로고    scopus 로고
    • Feature-based groupwise registration by hierarchical anatomical correspondence detection
    • Wu G, Wang Q, Jia H, Shen D (2012): Feature-based groupwise registration by hierarchical anatomical correspondence detection. Hum Brain Mapp 33:253-271.
    • (2012) Hum Brain Mapp , vol.33 , pp. 253-271
    • Wu, G.1    Wang, Q.2    Jia, H.3    Shen, D.4
  • 47
    • 48749129352 scopus 로고    scopus 로고
    • Effects of registration regularization and atlas sharpness on segmentation accuracy
    • Yeo BTT, Sabuncu MR, Desikan R, Fischl B, Golland P (2008): Effects of registration regularization and atlas sharpness on segmentation accuracy. Med Image Anal 12:603-615.
    • (2008) Med Image Anal , vol.12 , pp. 603-615
    • Yeo, B.T.T.1    Sabuncu, M.R.2    Desikan, R.3    Fischl, B.4    Golland, P.5
  • 49
    • 84872518384 scopus 로고    scopus 로고
    • Atlas construction via dictionary learning and group sparsity. In Medical Image Computing and Computer-Assisted Intervention-MICCAI 2012 - Springer Berlin Heidelberg.
    • Shi F, Wang L, Wu G, Zhang Y, Liu M, Gilmore JH, Lin W, Shen D (2012): Atlas construction via dictionary learning and group sparsity. In Medical Image Computing and Computer-Assisted Intervention-MICCAI 2012, pp. 247-255. Springer Berlin Heidelberg.
    • (2012) , pp. 247-255
    • Shi, F.1    Wang, L.2    Wu, G.3    Zhang, Y.4    Liu, M.5    Gilmore, J.H.6    Lin, W.7    Shen, D.8
  • 50
    • 70349974425 scopus 로고    scopus 로고
    • Neonatal brain image segmentation in longitudinal MRI studies
    • Shi F, Fan Y, Tang S, Gilmore JH, Lin W, Shen D (2010): Neonatal brain image segmentation in longitudinal MRI studies. Neuroimage 49:391-400.
    • (2010) Neuroimage , vol.49 , pp. 391-400
    • Shi, F.1    Fan, Y.2    Tang, S.3    Gilmore, J.H.4    Lin, W.5    Shen, D.6
  • 51
    • 84904511840 scopus 로고    scopus 로고
    • Longitudinally guided level sets for consistent tissue segmentation of neonates. Human brain mapping.
    • Wang L, Shi F, Yap P-T, Lin W, Gilmore JH, Shen D (2011): Longitudinally guided level sets for consistent tissue segmentation of neonates. Human brain mapping.
    • (2011)
    • Wang, L.1    Shi, F.2    Yap, P.-T.3    Lin, W.4    Gilmore, J.H.5    Shen, D.6
  • 52
    • 80053116555 scopus 로고    scopus 로고
    • Development trends of white matter connectivity in the first years of life. PLOS one
    • Yap P-T, Fan Y, Chen Y, Gilmore JH, Lin W, Shen D (2011): Development trends of white matter connectivity in the first years of life. PLOS one, 6(9), e24678.
    • (2011) , vol.6 , Issue.9
    • Yap, P.-T.1    Fan, Y.2    Chen, Y.3    Gilmore, J.H.4    Lin, W.5    Shen, D.6
  • 53
    • 78650188765 scopus 로고    scopus 로고
    • Brain anatomical networks in early human brain development
    • Fan Y, Shi F, Smith JK, Lin W, Gilmore JH, Shen D (2011): Brain anatomical networks in early human brain development. Neuroimage, 54(3), 1862-1871.
    • (2011) Neuroimage , vol.54 , Issue.3 , pp. 1862-1871
    • Fan, Y.1    Shi, F.2    Smith, J.K.3    Lin, W.4    Gilmore, J.H.5    Shen, D.6
  • 54
    • 77951945513 scopus 로고    scopus 로고
    • Construction of multi-region-multi-reference atlases for neonatal brain MRI segmentation
    • Shi F, Yap P-T, Fan Y, Gilmore JH, Lin W, Shen D, (2010): Construction of multi-region-multi-reference atlases for neonatal brain MRI segmentation. Neuroimage, 51(2), 684-693.
    • (2010) Neuroimage , vol.51 , Issue.2 , pp. 684-693
    • Shi, F.1    Yap, P.-T.2    Fan, Y.3    Gilmore, J.H.4    Lin, W.5    Shen, D.6
  • 55
    • 84883846045 scopus 로고    scopus 로고
    • Diffusion Tensor Image Registration Using Tensor Geometry and Orientation Features
    • In: Metaxas, D., Axel, L., Fichtinger, G., Székely, G., editors. 2008: Springer Berlin Heidelberg. p -
    • Yang J, Shen D, Davatzikos C, Verma R (2008): Diffusion Tensor Image Registration Using Tensor Geometry and Orientation Features. In: Metaxas, D., Axel, L., Fichtinger, G., Székely, G., editors. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008: Springer Berlin Heidelberg. p 905-913.
    • (2008) Medical Image Computing and Computer-Assisted Intervention - MICCAI , pp. 905-913
    • Yang, J.1    Shen, D.2    Davatzikos, C.3    Verma, R.4
  • 56
    • 43449092116 scopus 로고    scopus 로고
    • ORBIT: A Multiresolution Framework for Deformable Registration of Brain Tumor Images. IEEE Transactions on Medical Imaging
    • Zacharaki EI, Shen D, Lee S-k, Davatzikos C (2008): ORBIT: A Multiresolution Framework for Deformable Registration of Brain Tumor Images. IEEE Transactions on Medical Imaging, 27:1003-1017.
    • (2008) , vol.27 , pp. 1003-1017
    • Zacharaki, E.I.1    Shen, D.2    Lee, S.-K.3    Davatzikos, C.4
  • 57
    • 0033132544 scopus 로고    scopus 로고
    • Affine-invariant image retrieval by correspondence matching of shapes
    • lp HHS
    • Shen D, Wong W-h, lp HHS (1999): Affine-invariant image retrieval by correspondence matching of shapes. Image and Vision Computing, 17:489-499.
    • (1999) Image and Vision Computing , vol.17 , pp. 489-499
    • Shen, D.1    Wong, W.-h.2
  • 58
    • 33747837711 scopus 로고    scopus 로고
    • Statistical representation of high-dimensional deformation fields with application to statistically constrained 3D warping
    • Xue Z, Shen D, Davatzikos C (2006): Statistical representation of high-dimensional deformation fields with application to statistically constrained 3D warping. Medical Image Analysis, 10:740-751.
    • (2006) Medical Image Analysis , vol.10 , pp. 740-751
    • Xue, Z.1    Shen, D.2    Davatzikos, C.3
  • 59
    • 77952419496 scopus 로고    scopus 로고
    • ABSORB: Atlas building by self-organized registration and bundling
    • Jia H, Wu G, Wang Q, Shen D (2010): ABSORB: Atlas building by self-organized registration and bundling. NeuroImage, 51:1057-1070.
    • (2010) NeuroImage , vol.51 , pp. 1057-1070
    • Jia, H.1    Wu, G.2    Wang, Q.3    Shen, D.4
  • 60
    • 67651154142 scopus 로고    scopus 로고
    • RABBIT: Rapid alignment of brains by building intermediate templates
    • Tang S, Fan Y, Wu G, Kim M, Shen D (2009): RABBIT: Rapid alignment of brains by building intermediate templates. NeuroImage, 47:1277-1287.
    • (2009) NeuroImage , vol.47 , pp. 1277-1287
    • Tang, S.1    Fan, Y.2    Wu, G.3    Kim, M.4    Shen, D.5
  • 61
    • 67349227431 scopus 로고    scopus 로고
    • TIMER: Tensor Image Morphing for Elastic Registration
    • Yap P-T, Wu G, Zhu H, Lin W, Shen D (2009): TIMER: Tensor Image Morphing for Elastic Registration. NeuroImage, 47:549-563.
    • (2009) NeuroImage , vol.47 , pp. 549-563
    • Yap, P.-T.1    Wu, G.2    Zhu, H.3    Lin, W.4    Shen, D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.