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Volumn 175, Issue 4, 2014, Pages 469-481

A phylogenetic analysis of palm subtribe Archontophoenicinae (Arecaceae) based on 14 DNA regions

Author keywords

Areceae; Nuclear DNA; Palms; Phylogeny; Plastid DNA

Indexed keywords

ANGIOSPERM; CALEDONIAN OROGENY; DNA FINGERPRINTING; GENE; MORPHOLOGY; PHYLOGENETICS; PLASTID; SAMPLING; TAXONOMY;

EID: 84904504823     PISSN: 00244074     EISSN: 10958339     Source Type: Journal    
DOI: 10.1111/boj.12179     Document Type: Article
Times cited : (7)

References (43)
  • 1
    • 0001542894 scopus 로고    scopus 로고
    • Phylogeny of the palm family (Arecaceae) based on rps16 intron and trnL-trnF plastid DNA sequences
    • Wilson KL, Morrison DA, eds. Collingwood: CSIRO
    • Asmussen CB, Baker WJ, Dransfield J. 2000. Phylogeny of the palm family (Arecaceae) based on rps16 intron and trnL-trnF plastid DNA sequences. In: Wilson KL, Morrison DA, eds. Monocots: systematics and evolution. Collingwood: CSIRO, 525-535.
    • (2000) Monocots: systematics and evolution , pp. 525-535
    • Asmussen, C.B.1    Baker, W.J.2    Dransfield, J.3
  • 2
    • 0347420076 scopus 로고    scopus 로고
    • Coding and noncoding plastid DNA in palm systematics
    • Asmussen CB, Chase MW. 2001. Coding and noncoding plastid DNA in palm systematics. American Journal of Botany 88: 1103-1117.
    • (2001) American Journal of Botany , vol.88 , pp. 1103-1117
    • Asmussen, C.B.1    Chase, M.W.2
  • 6
    • 84872609800 scopus 로고    scopus 로고
    • Biogeography and distribution patterns of Southeast Asian palms
    • Gower DJ, Johnson KG, Richardson JE, Rosen BR, Ruber L, Williams ST, eds. Cambridge: Cambridge University Press
    • Baker WJ, Couvreur TLP. 2012. Biogeography and distribution patterns of Southeast Asian palms. In: Gower DJ, Johnson KG, Richardson JE, Rosen BR, Ruber L, Williams ST, eds. Biotic evolution and environmental change in Southeast Asia. Cambridge: Cambridge University Press, 164-190.
    • (2012) Biotic evolution and environmental change in Southeast Asia , pp. 164-190
    • Baker, W.J.1    Couvreur, T.L.P.2
  • 10
    • 35948947430 scopus 로고    scopus 로고
    • Phylogenetic relationships of the cultivated neotropical palm Bactris gasipaes (Arecaceae) with its wild relatives inferred from chloroplast and nuclear DNA polymorphisms
    • Couvreur T, Hahn W, de Granville J, Pham J, Ludena B, Pintaud J. 2007. Phylogenetic relationships of the cultivated neotropical palm Bactris gasipaes (Arecaceae) with its wild relatives inferred from chloroplast and nuclear DNA polymorphisms. Systematic Botany 32: 519-530.
    • (2007) Systematic Botany , vol.32 , pp. 519-530
    • Couvreur, T.1    Hahn, W.2    de Granville, J.3    Pham, J.4    Ludena, B.5    Pintaud, J.6
  • 11
    • 34447299928 scopus 로고    scopus 로고
    • Phylogeny of the palm tribe Chamaedoreeae (Arecaceae) based on plastid DNA sequences
    • Cuenca A, Asmussen CB. 2007. Phylogeny of the palm tribe Chamaedoreeae (Arecaceae) based on plastid DNA sequences. Systematic Botany 32: 250-263.
    • (2007) Systematic Botany , vol.32 , pp. 250-263
    • Cuenca, A.1    Asmussen, C.B.2
  • 13
    • 84856197809 scopus 로고    scopus 로고
    • Collingwood, Australia: CSIRO Publishing.
    • Dowe JL. 2010. Australian palms. Collingwood, Australia: CSIRO Publishing.
    • (2010) Australian palms
    • Dowe, J.L.1
  • 14
    • 0000029211 scopus 로고
    • A revision of Archontophoenix H. Wendl. & Drude (Arecaceae)
    • Dowe JL, Hodel DR. 1994. A revision of Archontophoenix H. Wendl. & Drude (Arecaceae). Austrobaileya 4: 227-244.
    • (1994) Austrobaileya , vol.4 , pp. 227-244
    • Dowe, J.L.1    Hodel, D.R.2
  • 15
    • 85007102788 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
    • (1987) Phytochemical Bulletin , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 18
    • 0036332987 scopus 로고    scopus 로고
    • A systematic histological study of palm fruits. V. Subtribe Archontophoenicinae (Arecaceae)
    • Essig FB, Hernandez N. 2002. A systematic histological study of palm fruits. V. Subtribe Archontophoenicinae (Arecaceae). Brittonia 54: 65-71.
    • (2002) Brittonia , vol.54 , pp. 65-71
    • Essig, F.B.1    Hernandez, N.2
  • 19
    • 0029812835 scopus 로고    scopus 로고
    • Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL
    • Gaut B, Morton BR, McCaig BC, Clegg MT. 1996. Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL. Proceedings of the National Academy of Sciences of the United States of America 93: 10274-10279.
    • (1996) Proceedings of the National Academy of Sciences of the United States of America , vol.93 , pp. 10274-10279
    • Gaut, B.1    Morton, B.R.2    McCaig, B.C.3    Clegg, M.T.4
  • 20
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
    • Guindon S, Dufayard J-F, Lefort V, Anisimova M, Hordijk W, Gascuel O. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology 59: 307-321.
    • (2010) Systematic Biology , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.-F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 21
    • 0035983975 scopus 로고    scopus 로고
    • A phylogenetic analysis of the arecoid line of palms based on plastid DNA sequence data
    • Hahn WJ. 2002. A phylogenetic analysis of the arecoid line of palms based on plastid DNA sequence data. Molecular Phylogenetics and Evolution 23: 189-204.
    • (2002) Molecular Phylogenetics and Evolution , vol.23 , pp. 189-204
    • Hahn, W.J.1
  • 22
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95,98,NT
    • Nucleic Acids Symposium Series
    • Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95, 98, NT. Nucleic Acids Symposium Series 41: 95-98.
    • (1999) , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 23
    • 79957567311 scopus 로고    scopus 로고
    • DNA barcoding: a new tool for palm taxonomists?
    • Jeanson ML, Labat JN, Little DP. 2011. DNA barcoding: a new tool for palm taxonomists? Annals of Botany 108: 1445-1451.
    • (2011) Annals of Botany , vol.108 , pp. 1445-1451
    • Jeanson, M.L.1    Labat, J.N.2    Little, D.P.3
  • 24
    • 45949107473 scopus 로고    scopus 로고
    • Recent developments in the MAFFT multiple sequence alignment program
    • Katoh K, Toh H. 2008. Recent developments in the MAFFT multiple sequence alignment program. Briefings in Bioinformatics 9: 286-298.
    • (2008) Briefings in Bioinformatics , vol.9 , pp. 286-298
    • Katoh, K.1    Toh, H.2
  • 25
    • 0036926072 scopus 로고    scopus 로고
    • A phylogenetic analysis of tribe Areceae (Arecaceae) using two low-copy nuclear genes
    • Lewis CE, Doyle JJ. 2002. A phylogenetic analysis of tribe Areceae (Arecaceae) using two low-copy nuclear genes. Plant Systematics and Evolution 236: 1-17.
    • (2002) Plant Systematics and Evolution , vol.236 , pp. 1-17
    • Lewis, C.E.1    Doyle, J.J.2
  • 26
    • 33646503886 scopus 로고    scopus 로고
    • Low-copy nuclear DNA, phylogeny and the evolution of dichogamy in the betel nut palms and their relatives (Arecinae; Arecaceae)
    • Loo AHB, Dransfield J, Chase MW, Baker WJ. 2006. Low-copy nuclear DNA, phylogeny and the evolution of dichogamy in the betel nut palms and their relatives (Arecinae; Arecaceae). Molecular Phylogenetics and Evolution 39: 598-618.
    • (2006) Molecular Phylogenetics and Evolution , vol.39 , pp. 598-618
    • Loo, A.H.B.1    Dransfield, J.2    Chase, M.W.3    Baker, W.J.4
  • 27
    • 81855190629 scopus 로고    scopus 로고
    • Phylogenetic utility of the nuclear genes AGAMOUS 1 and PHYTOCHROME B in palms (Arecaceae): an example within Bactridinae
    • Ludeña B, Chabrillange N, Aberlenc-Bertossi F, Adam H, Tregear JW, Pintaud JC. 2011. Phylogenetic utility of the nuclear genes AGAMOUS 1 and PHYTOCHROME B in palms (Arecaceae): an example within Bactridinae. Annals of Botany 108: 1433-1444.
    • (2011) Annals of Botany , vol.108 , pp. 1433-1444
    • Ludeña, B.1    Chabrillange, N.2    Aberlenc-Bertossi, F.3    Adam, H.4    Tregear, J.W.5    Pintaud, J.C.6
  • 28
    • 22944482184 scopus 로고    scopus 로고
    • SeqState - primer design and sequence statistics for phylogenetic DNA data sets
    • Müller K. 2005. SeqState - primer design and sequence statistics for phylogenetic DNA data sets. Applied Bioinformatics 4: 65-69.
    • (2005) Applied Bioinformatics , vol.4 , pp. 65-69
    • Müller, K.1
  • 29
    • 81855214675 scopus 로고    scopus 로고
    • Evolution of the palm androecium as revealed by character mapping on a supertree
    • Wanntorp L, Ronse de Craene L, eds. Cambridge: Cambridge University Press
    • Nadot S, Sannier J, Barfod AS, Baker WJ. 2011. Evolution of the palm androecium as revealed by character mapping on a supertree. In: Wanntorp L, Ronse de Craene L, eds. Flowers on the tree of life. Cambridge: Cambridge University Press, 156-180.
    • (2011) Flowers on the tree of life , pp. 156-180
    • Nadot, S.1    Sannier, J.2    Barfod, A.S.3    Baker, W.J.4
  • 30
    • 33746016629 scopus 로고    scopus 로고
    • Homoplasious character combinations and generic delimitation: a case study from the Indo-Pacific arecoid palms (Arecaceae: Areceae)
    • Norup MV, Dransfield J, Chase MW, Barfod AS, Fernando ES, Baker WJ. 2006. Homoplasious character combinations and generic delimitation: a case study from the Indo-Pacific arecoid palms (Arecaceae: Areceae). American Journal of Botany 93: 1065-1080.
    • (2006) American Journal of Botany , vol.93 , pp. 1065-1080
    • Norup, M.V.1    Dransfield, J.2    Chase, M.W.3    Barfod, A.S.4    Fernando, E.S.5    Baker, W.J.6
  • 31
    • 22944456598 scopus 로고    scopus 로고
    • Uppsala: Evolutionary Biology Centre, Uppsala University.
    • Nylander JAA. 2004. MrModeltest v2. Uppsala: Evolutionary Biology Centre, Uppsala University.
    • (2004) MrModeltest v2
    • Nylander, J.A.A.1
  • 32
    • 0009897605 scopus 로고    scopus 로고
    • A cladistic analysis of the Archontophoenicinae (Palmae, Areceae) based on morphological and anatomical characters
    • Pintaud JC. 1999a. A cladistic analysis of the Archontophoenicinae (Palmae, Areceae) based on morphological and anatomical characters. Memoirs of the New York Botanical Garden 83: 279-284.
    • (1999) Memoirs of the New York Botanical Garden , vol.83 , pp. 279-284
    • Pintaud, J.C.1
  • 34
    • 0003374324 scopus 로고    scopus 로고
    • A revision of Kentiopsis, a genus endemic to New Caledonia
    • Pintaud JC, Hodel DR. 1998. A revision of Kentiopsis, a genus endemic to New Caledonia. Principes 42: 41-53.
    • (1998) Principes , vol.42 , pp. 41-53
    • Pintaud, J.C.1    Hodel, D.R.2
  • 35
    • 49349106106 scopus 로고    scopus 로고
    • A revision of the palm genera (Arecaceae) of New Caledonia
    • Pintaud J-C, Baker WJ. 2008. A revision of the palm genera (Arecaceae) of New Caledonia. Kew Bulletin 63: 61-73.
    • (2008) Kew Bulletin , vol.63 , pp. 61-73
    • Pintaud, J.-C.1    Baker, W.J.2
  • 36
    • 20744434724 scopus 로고    scopus 로고
    • Molecular phylogenetics of tribe Geonomeae (Arecaceae) using nuclear DNA sequences of phosphoribulokinase and RNA polymerase II
    • Roncal J, Francisco-Ortega J, Asmussen CB, Lewis CE. 2005. Molecular phylogenetics of tribe Geonomeae (Arecaceae) using nuclear DNA sequences of phosphoribulokinase and RNA polymerase II. Systematic Botany 30: 275-283.
    • (2005) Systematic Botany , vol.30 , pp. 275-283
    • Roncal, J.1    Francisco-Ortega, J.2    Asmussen, C.B.3    Lewis, C.E.4
  • 37
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics Applications Note 19: 1572-1574.
    • (2003) Bioinformatics Applications Note , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 38
    • 0034350427 scopus 로고    scopus 로고
    • Gaps as characters in sequence-based phylogenetic analyses
    • Simmons MP, Ochoterena H. 2000. Gaps as characters in sequence-based phylogenetic analyses. Systematic Biology 49: 369-381.
    • (2000) Systematic Biology , vol.49 , pp. 369-381
    • Simmons, M.P.1    Ochoterena, H.2
  • 42
    • 79952406380 scopus 로고    scopus 로고
    • SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information
    • Vaidya G, Lohman DJ, Meier R. 2011. SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information. Cladistics 27: 171-180.
    • (2011) Cladistics , vol.27 , pp. 171-180
    • Vaidya, G.1    Lohman, D.J.2    Meier, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.