Transmission protocols for calcium-signaling-based molecular communications in deformable cellular tissue

IEEE Transactions on Nanotechnology

Volumn 13, Issue 4, 2014, Pages 779-788

  Barros, Michael Taynnan ^a   Balasubramaniam, Sasitharan ^b   Jennings, Brendan ^a   Koucheryavy, Yevgeni ^b  

^a Ireland   (Ireland)

^b TAMPERE UNIVERSITY OF TECHNOLOGY   (Finland)

Author keywords

Calcium signaling; deformable tissue; molecular communications; transmission protocols

Indexed keywords

CALCIUM; DEFORMATION; SIGNALING; TISSUE;

BIOLOGICAL CELLS; BIOLOGICAL ENVIRONMENTS; CALCIUM SIGNALING; MOLECULAR COMMUNICATION; MUTUAL INFORMATIONS; NUMBER OF TRANSMISSIONS; SIMULATION STUDIES; TRANSMISSION PROTOCOLS;

CELL SIGNALING;

EID: 84904293270     PISSN: 1536125X     EISSN: None     Source Type: Journal    
DOI: 10.1109/TNANO.2014.2321492     Document Type: Article

References (26)

1. D. Kilinc and O. B. Akan, "An information theoretical analysis of nanoscale molecular gap junction communication channel between cardiomyocytes," IEEE Trans. Nanotechnol., vol. 12, no. 2, pp. 129-136, Mar. 2013.
2. B. D. Unluturk, D. Malak, and O. B. Akan, "Rate-delay tradeoff with network coding in molecular nanonetworks," IEEE Trans. Nanotechnol., vol. 12, no. 2, pp. 120-128, Mar. 2013.
3. I. F. Akyildiz, F. Brunetti, and C. Blazquez, "Nanonetworks: A new communication paradigm," Comput. Netw., vol. 52, pp. 2260-2279, 2008.
4. B. Gulbahar and O. B. Akan, "A communication theoretical modeling of single-layer graphene photodetectors and efficient multireceiver diversity combining," IEEE Trans. Nanotechnol., vol. 11, no. 3, pp. 601-610, May 2012.
5. J. M. Jornet and I. F. Akyildiz, "Joint energy harvesting and communication analysis for perpetual wireless nanosensor networks in the terahertz band," IEEE Trans. Nanotechnol., vol. 11, no. 3, pp. 570-580, May 2012.
6. I. F. Akyildiz and J. M. Jornet, "The internet of nano-things," IEEE Wireless Commun., vol. 17, no. 6, pp. 58-63, Dec. 2010.
7. M. Kuran, T. Tugcu and B. O. Edis, "Calcium signaling: Overview and research directions of a molecular communication paradigm," IEEE Wireless Commun., vol. 19, no. 5, pp. 20-27, Oct. 2012.
8. I. Akyildiz, F. Fekri, R. S. C. R. Forest, and B. K. Hammer, "Monaco: Fundamentals of molecular nano-communication networks," IEEE Wireless Commun., vol. 19, no. 5, pp. 12-18, Oct. 2012.
9. B. Atakan, S. Balasubramaniam, and O. B. Akan, "Body area nanonetworks with molecular communications in nanomedicine," IEEE Commun. Mag., vol. 50, no. 1, pp. 28-34, Jan. 2012.
10. M. Pierobon and I. F. Akyildiz, "Diffusion-based noise analysis for molecular communication in nanonetworks," IEEE Trans. Signal Process., vol. 59, no. 6, pp. 2532-2547, Jun. 2011.
11. M. Pierobon and I. F. Akyildiz, "Noise analysis in ligand-binding reception for molecular communication in nanonetworks," IEEE Trans. Signal Process., vol. 59, no. 9, pp. 4168-4182, Sep. 2011.
12. A. Guney, B. Atakan, and O. B. Akan, "Mobile ad hoc nanonetworks with collision-basedmolecular communication," IEEE Trans. Mobile Comput., vol. 11, no. 3, pp. 353-366, Mar. 2012.
13. T. Nakano, T. Suda, M. Moore, R. Egashira, A. Enomoto, and K. Arima, "Molecular communication for nanomachines using intercellular calcium signaling," in Proc. IEEE 5th Conf. Nanotechnol., 2005, pp. 478-481.
14. A. C. Heren, M. S. Kuran, H. B. Yilmaz, and T. Tugcu, "Channel capacity of calcium signalling based on inter-cellular calcium waves in astrocytes," in Proc. IEEE Int. Conf. Commun. Workshop, 2013, pp. 792-797.
15. A. Enomoto, M. Moore, T. Nakano, R. Egashira, T. Suda, A. Kayasuga, H. Kojima, H. Sakakibara, and K. Oiwa, "A molecular communication system using a network of cytoskeleton filaments," in Proc. Nano Sci. Technol. Inst.-Nanotech, 2006, pp. 725-728. (Pubitemid 44852964)
16. J. Hurtig, D. T. Chiu, and B. Onfelt, "Intercellular nanotubes: Insights from imaging studies and beyond," Wiley Interdiscipl. Rev.: Nanomed. Nanobiotechnol., vol. 2, no. 3, pp. 260-276, 2010.
17. M. Gregori and I. Akyildiz, "A new nanonetwork architecture using flagellated bacteria and catalytic nanomotors," IEEE J. Sel. Areas Commun., vol. 28, no. 4, pp. 612-619, May 2010.
18. M. Gregori, I. Llatser, A. Cabellos-Aparicio, and E. Alarcón, "Physical channel characterization for medium-range nanonetworks using catalytic nanomotors," Nano Commun. Netw., vol. 1, no. 2, pp. 102-107, 2010.
19. P. Lio and S. Balasubramaniam, "Opportunistic routing through conjugation in bacteria communication nanonetwork," Nano Commun. Netw., vol. 3, pp. 36-45, 2012.
20. L. C. Cobo and I. F. Akyildiz, "Bacteria-based communication in nanonetworks," Nano Commun. Netw., vol. 1, pp. 244-256, 2010.
21. T. Nakano and J.-Q. Liu, "Design and analysis ofmolecular relay channels: An information theoretic approach," IEEE Trans. Nanobiosci., vol. 9, no. 3, pp. 213-221, Sep. 2010.
22. A. Goldbeter, G. Dupont, and M. J. Berridge, "Minimal model for signalinduced Ca2+ oscillations and for their frequency encoding through protein phosphorylation," Proc. Nat. Acad. Sci. USA, vol. 87, pp. 1461-1465, 1990.
23. D. T. Gillespie, "Exact stochastic simulation of coupled chemical reactions," J. Phys. Chem., vol. 81, no. 25, pp. 2340-2361, 1977.
24. R. V. Krsti, " Surface epithelia. Simple cuboidal epithelium. Example: Distal tubule of the nephron," in GeneralHistology of the Mammal. Berlin, Germany: Springer-Verlag, 1985, pp. 24-25.
25. Y. Zhu and R. Sivakumar, "Challenges: Communication through silence in wireless sensor networks," in Proc. ACM Mobicom 11th Annu. Int. Conf. Mobile Comput. Netw., 2005, pp. 140-147. (Pubitemid 43206600)
26. B. Krishnaswamy, C. M. Henegar, J. P. Bardill, D. Russakow, G. L. Holst, B. K. Hammer, C. R. Forest, and R. Sivakumar, "When bacteria talk: Time elapse communication for super-slow networks," in Proc. IEEE Int. Conf. Commun., 2013, pp. 6348-6353.