Rapid fluorescent detection of escherichia coli K88 based on DNA aptamer library as direct and specific reporter combined with immuno-magnetic separation

Journal of Fluorescence

Volumn 24, Issue 4, 2014, Pages 1159-1168

  Peng, Zhihui ^a   Ling, Min ^a   Ning, Yi ^a   Deng, Le ^a  

^a HUNAN NORMAL UNIVERSITY   (China)

Author keywords

Aptamer library; ETEC K88 detection; IMS; Reporter

Indexed keywords

BACTERIA; CELLS; CYTOLOGY; ESCHERICHIA COLI; MAGNETIC SEPARATION; MONOCLONAL ANTIBODIES; PROTEINS;

APTAMERS; FLOW-CYTOMETRIC ANALYSIS; FLUORESCENT DETECTION; IMS; MONOCLONAL ANTIBODIES (MAB); NUCLEIC ACID APTAMERS; REPORTER; SYSTEMATIC EVOLUTION OF LIGANDS BY EXPONENTIAL ENRICHMENTS;

DNA;

APTAMER;

CHEMISTRY; COMBINATORIAL CHEMISTRY; ESCHERICHIA COLI; FLUORESCENCE; IMMUNOLOGY; IMMUNOMAGNETIC SEPARATION; ISOLATION AND PURIFICATION; TIME;

APTAMERS, NUCLEOTIDE; ESCHERICHIA COLI; FLUORESCENCE; IMMUNOMAGNETIC SEPARATION; SELEX APTAMER TECHNIQUE; TIME FACTORS;

EID: 84904094018     PISSN: 10530509     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10895-014-1396-x     Document Type: Article

References (41)

1. Arora P, Sindhu A, Kaur H, Dilbaghi N, Chaudhury A (2013) An Overview of Transducers as Platform for the Rapid Detection of Foodborne Pathogens. Appl Microbiol Biotechnol 97(5):1829-40
2. Beatty JD, Beatty BG, Vlahos WG (1987) Measurement of Monoclonal Antibody Affinity by non-Competitive Enzyme Immunoassay. J Immunol Methods 100(1-2):173-9 (Pubitemid 17085455)
3. Bruno JG, Carrillo MP, Phillips T (2008) Development of DNA Aptamers to a Foot-and-Mouth Disease Peptide for Competitive FRET-Based Detection. J Biomol Tech 19(2):109-15
4. Bruno JG, Richarte AM, Phillips T, Savage AA, Sivils JC, Greis A, Mayo MW (2013) Development of a Fluorescent Enzyme-Linked DNA Aptamer-Magnetic Bead Sandwich Assay and Portable Fluorometer for Sensitive and Rapid Leishmania Detection in Sandflies. J Fluoresc. doi: 10.1007/s10895-013-1315-6
5. Bruno JG, Carrillo MP, Phillips T, Andrews CJ (2010) A Novel Screening Method for Competitive FRET-Aptamers Applied to E. coli Assay Development. J Fluoresc 20(6):1211-23
6. Buranachai C, Thavarungkul P, Kanatharana P (2012) A Novel Reconfigurable Optical Biosensor Based on DNA Aptamers and a DNA Molecular Beacon. J Fluoresc 22(6):1617-25
7. Cho IH, Irudayaraj J (2013) In-situ Immuno-Gold Nanoparticle Network ELISA Biosensors for Pathogen Detection. Int J Food Microbiol 164(1):70-5
8. Dundas CM, Demonte D, Park S (2013) Streptavidin-Biotin Technology: Improvements and Innovations in Chemical and Biological Applications. Appl Microbiol Biotechnol 97:9343-9353
9. Devriendt B, Stuyven E, Verdonck F, Goddeeris BM, Cox E (2010) Enterotoxigenic Escherichia coli (K88) Induce Proinflammatory Responses in Porcine Intestinal Epithelial Cells. Dev Comp Immunol 34(11):1175-82
10. Dwivedi HP, Smiley RD, Jaykus LA (2013) Selection of DNA Aptamers for Capture and Detection of Salmonella Typhimurium Using a Whole-Cell SELEX Approach Inconjunction With Cell Sorting. Appl Microbiol Biotechnol 97:3677-3686
11. Dwivedi HP, Smiley RD, Jaykus LA (2010) Selection and Characterization of DNA Aptamers With Binding Selectivity to Campylobacter Jejuni Using Whole-Cell SELEX. Appl Microbiol Biotechnol 87(6):2323-34
12. Friguet B, Chaffotte AF, Djavadi-Ohaniance L, Goldberg ME (1985) Measurements of the True Affinity Constant in Solution of Antigen-Antibody Complexes by Enzyme-Linked Immunosorbent Assay. J Immunol Methods 77(2):305-19 (Pubitemid 15103678)
13. Fujioka M, Kasai K, Miura T, Sato T, Otomo Y (2009) Rapid Diagnostic Method for the Detection of Diarrheagenic Escherichia coli by Multiplex PCR. Jpn J Infect Dis 62(6):476-80
14. Han SR, Lee SW (2013) In vitro Selection of RNA Aptamer Specific to Salmonella Typhimurium. J Microbiol Biotechnol 23(6):878-84
15. Hornes E, Wasteson Y, Olsvik O (1991) Detection of Escherichia coli heat-stable enterotoxin genes in pig stool specimens by an immobilized, colorimetric, nested polymerase chain reaction. J Clin Microbiol 29(11):2375-9
16. Jain A, Nair PR, Alam MA (2013) Flexure-FET Biosensor to Break the Fundamental Sensitivity Limits of Nanobiosensors Using Nonlinear Electromechanical Coupling. Proc Natl Acad Sci U S A 109(24):9304-8
17. Jin LZ, Zhao X (2000) Intestinal Receptors for Adhesive Fimbriae of Enterotoxigenic Escherichia Coli (ETEC) K88 in Swine-a Review. Appl Microbiol Biotechnol 54(3):311-8
18. Kar P, Shankar K (2013) Biodiagnostics Using Oriented and Aligned Inorganic Semiconductor Nanotubes and Nanowires. J Nanosci Nanotechnol 13(7):4473-96
19. Kim MA, Jeon HS, Shin SY, Baik BJ, Yang YM, Lee KY, Kim JG (2013) Rapid Detection of S. Mutans Surface Antigen I/II Using a Sensitive Monoclonal Anti-Ag I/II Antibody by ELISA. Monoclon Antib Immunodiagn Immunother 32(5):336-40
20. Kovacs-Nolan J, Mine Y (2012) Egg Yolk Antibodies for Passive Immunity. Annu Rev Food Sci Technol 3:163-82
21. Li H, Ding X, Peng Z, Deng L, Wang D, Chen H, He Q (2011) Aptamer Selection for the Detection of Escherichia Coli K88. Can J Microbiol 57:453-459
22. Liu Y, Ye J, Li Y (2003) Rapid Detection of Escherichia Coli O157:H7 Inoculated in Ground Beef, Chicken Carcass, and Lettuce Samples With an Immunomagnetic Chemiluminescence Fiber-Optic Biosensor. J Food Prot 66(3):512-7 (Pubitemid 36326064)
23. Lund A, Hellemann AL, Vartdal F (1988) Rapid Isolation of K88+ Escherichia Coli by Using Immunomagnetic Particles. J Clin Microbiol 26(12):2572-5 (Pubitemid 19001574)
24. Ma X, Jiang Y, Jia F, Yu Y, Chen J, Wang Z (2014) An Aptamer-Based Electrochemical Biosensor for the Detection of Salmonella. J Microbiol Methods 98C:94-98
25. Moon J, Kim G, Lee S, Park S (2013) Identification of Salmonella Typhimurium-Specific DNA Aptamers Developed Using Whole-Cell SELEX and FACS Analysis. J Microbiol Methods 95(2):162-6
26. Ohk SH, Koo OK, Sen T, Yamamoto CM, Bhunia AK (2010) Antibody-Aptamer Functionalized Fibre-Optic Biosensor for Specific Detection of Listeria Monocytogenes from Food. J Appl Microbiol 109(3):808-17
27. Ozalp VC, Bayramoglu G, Arica MY, Oktem HA (2013) Design of a Core-Shell Type Immuno-Magnetic Separation System and Multiplex PCR for Rapid Detection of Pathogens from Food Samples. Appl Microbiol Biotechnol 97(21):9541-9551
28. Proske D, Blank M, Buhmann R, Resch A (2005) Aptamers-Basic Research, Drug Development, and Clinical Applications. Appl Microbiol Biotechnol 69(4):367-74 (Pubitemid 41737059)
29. Salehi TZ, Tadjbakhsh H, Atashparvar N, Nadalian MG, Mahzounieh MR (2007) Detection and identification of Salmonella Typhimurium in bovine diarrhoeic fecal samples by immunomagnetic separation and multiplex PCR assay. Zoonoses Public Health 54(6-7):231-6 (Pubitemid 47351521)
30. Suh SH, Jaykus LA (2013) Nucleic acid aptamers for capture and detection of Listeria spp. J Biotechnol 167(4):454-61
31. Sung YJ, Suk HJ, Sung HY, Li T, Poo H, Kim MG (2013) Novel Antibody/Gold Nanoparticle/Magnetic Nanoparticle Nanocomposites for Immunomagnetic Separation and Rapid Colorimetric Detection of Staphylococcus Aureus in Milk. Biosens Bioelectron 43:432-9
32. Tan W, Donovan MJ, Jiang J (2013) Aptamers from Cell-Based Selection for Bioanalytical Applications. Chem Rev 113(4):2842-62
33. Trombley Hall A, McKay Zovanyi A, Christensen DR, Koehler JW, Devins Minogue T (2013) Evaluation of Inhibitor-Resistant Real-Time PCR Methods for Diagnostics in Clinical and Environmental Samples. PLoS One 8(9):e73845
34. Tsai TY, Lee WJ, Huang YJ, Chen KL, Pan TM (2006) Detection of Viable Enterohemorrhagic Escherichia Coli O157 Using the Combination of Immunomagnetic Separation With the Reverse Transcription Multiplex TaqMan PCR System in Food and Stool Samples. J Food Prot 69(10):2320-8
35. Van den Broeck W, Cox E, Oudega B, Goddeeris BM (2000) The F4 Fimbrial Antigen of Escherichia Coli and its Receptors. Vet Microbiol 71(3-4):223-44 (Pubitemid 30070061)
36. Vazquez F, González EA, Garabal JI, Valderrama S, Blanco J, Baloda SB (1996) Development and Evaluation of an ELISA to Detect Escherichia Coli K88 (F4) Fimbrial Antibody Levels. J Med Microbiol 44(6):453-63 (Pubitemid 26180058)
37. Wang L, Li Y, Mustaphai A (2007) Rapid and Simultaneous Quantitation of Escherichia Coli 0157:H7, Salmonella, and Shigella in Ground Beef by Multiplex Real-Time PCR and Immunomagnetic Separation. J Food Prot 70(6):1366-72 (Pubitemid 46919656)
38. Weigand JE, Suess B (2009) Aptamers and Riboswitches: Perspectives in Biotechnology. Appl Microbiol Biotechnol 85(2):229-36
39. Xu Y, Li X, Jin L, Zhen Y, Lu Y, Li S, You J, Wang L (2011) Application of Chicken egg Yolk Immunoglobulins in the Control of Terrestrial and Aquatic Animal Diseases: A Review. Biotechnol Adv 29(6):860-8
40. Yang M, Peng Z, Ning Y, Chen Y, Zhou Q, Deng L (2013) Highly Specific and Cost-Efficient Detection of Salmonella Paratyphi A Combining Aptamers With Single-Walled Carbon Nanotubes. Sensors (Basel) 13(5):6865-81
41. Yang Y, Xu F, Xu H, Aguilar ZP, Niu R, Yuan Y, Sun J, You X, Lai W, Xiong Y, Wan C, Wei H (2013) Magnetic Nano-Beads Based Separation Combined With Propidium Monoazide Treatment and Multiplex PCR Assay for Simultaneous Detection of Viable Salmonella Typhimurium, Escherichia Coli O157:H7 and Listeria Monocytogenes in Food Products. Food Microbiol 34(2):418-24