Diel size distributions reveal seasonal growth dynamics of a coastal phytoplankter

Proceedings of the National Academy of Sciences of the United States of America

Volumn 111, Issue 27, 2014, Pages 9852-9857

  Hunter Cevera, Kristen R ^a   Neubert, Michael G ^a   Solow, Andrew R ^a   Olson, Robert J ^a   Shalapyonok, Alexi ^a   Sosik, Heidi M ^a  

^a WOODS HOLE OCEANOGRAPHIC INSTITUTION   (United States)

Author keywords

Cyanobacteria; Flow cytometry; FlowCytobot; Phytoplankton blooms

Indexed keywords

ARTICLE; CELL SIZE; CELLULAR DISTRIBUTION; DYNAMICS; NATURAL POPULATION; NONHUMAN; OBSERVATIONAL STUDY; PHYTOPLANKTON; POPULATION MODEL; PRIORITY JOURNAL; SEASONAL VARIATION; SPRING; SYNECHOCOCCUS; TEMPERATURE; VINEYARD;

CYANOBACTERIA; FLOW CYTOMETRY; FLOWCYTOBOT; PHYTOPLANKTON BLOOMS;

CELL SIZE; MODELS, BIOLOGICAL; OCEANS AND SEAS; PHYTOPLANKTON; POPULATION GROWTH; SEASONS; SYNECHOCOCCUS;

EID: 84903975697     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1321421111     Document Type: Article

References (38)

1. Field CB, Behrenfeld MJ, Randerson JT, Falkowski P (1998) Primary production of the biosphere: Integrating terrestrial and oceanic components. Science 281(5374):237-240. (Pubitemid 28334501)
2. Campbell L, et al. (2010) First harmful Dinophysis (Dinophyceae, Dinophysiales) bloom in the U.S. is revealed by automated imaging flow cytometry. J Phycol 46(1):66-75.
3. Landry M, Hassett R (1982) Estimating the grazing impacts of micro-zooplankton. Mar Biol 67(3):283-288.
4. Worden AZ, Binder BJ (2003) Application of dilution experiments for measuring growth and mortality rates among Prochlorococcus and Synechococcus populations in oligotrophic environments. Aquat Microb Ecol 30(2):159-174. (Pubitemid 36161728)
5. McDuff R, Chisholm S (1982) The calculation of in situ growth rates of phytoplankton populations from fractions of cells undergoing mitosis: A clarification. Limnol Oceanogr 27(4):783-788.
6. Campbell L, Carpenter EJ (1986) Estimating the grazing pressure of heterotrophic nanoplankton on Synechococcus spp. using the sea water dilution and selective inhibitor techniques. Mar Ecol Prog Ser 33:121-129.
7. Binder BJ, Chisholm SW (1995) Cell cycle regulation in marine Synechococcus sp. strains. Appl Environ Microbiol 61(2):708-717.
8. DuRand MD (1995) Phytoplankton growth and diel variations in beam attenuation through individual cell analysis. PhD thesis (Massachusetts Institute of Technology, Woods Hole Oceanographic Institution, Woods Hole, MA).
9. Binder BJ, Chisholm SW, Olson RJ, Frankel SL, Worden AZ (1996) Dynamics of picophytoplankton, ultraphytoplankton and bacteria in the central equatorial Pacific. Deep Sea Res Part II Top Stud Oceanogr 43(4-6):907-931.
10. Vaulot D, Marie D (1999) Diel variability of photosynthetic picoplankton in the equatorial Pacific. J Geophys Res 104(C2):3297-3310. (Pubitemid 29317134)
11. Waterbury JB, Watson SW, Valois FW, Franks DG (1986) Biological and ecological characterization of the marine unicellular cyanobacterium Synechococcus. Can Bull Fish Aquat Sci 214:71-120.
12. Jacquet S, Partensky F, Lennon J-F, Vaulot D (2001) Diel patterns of growth and division in marine picoplankton in culture. J Phycol 37(3):357-369. (Pubitemid 32548234)
13. Sosik HM, Olson RJ, Neubert MG, Shalapyonok A, Solow AR (2003) Growth rates of coastal phytoplankton from time-series measurements with a submersible flow cytometer. Limnol Oceanogr 48(5):1756-1765. (Pubitemid 37207583)
14. Steele J, ed (1978) Spatial Pattern in Plankton Communities, Nato Conference Series (Springer, New York), Vol 3.
15. Olson RJ, Shalapyonok AA, Sosik HM (2003) An automated submersible flow cytometer for pico- and nanophytoplankton: FlowCytobot. Deep Sea Res Part I Oceanogr Res Pap 50(2):301-315. (Pubitemid 37343057)
16. Zinser ER, Kolter R (1999) Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase. J Bacteriol 181(18):5800-5807. (Pubitemid 29437153)
17. Ryall B, Eydallin G, Ferenci T (2012) Culture history and population heterogeneity as determinants of bacterial adaptation: The adaptomics of a single environmental transition. Microbiol Mol Biol Rev 76(3):597-625.
18. Lawrence Lin AS, Hedayat BS, Yang M (2002) Statistical methods in assessing agreement: Models, issues and tools. J Am Stat Assoc 97(457):257-270.
19. Gallegos CL (1989) Microzooplankton grazing in phytoplankton in the Rhode River, Maryland: Nonlinear feeding kinetics. Mar Ecol Prog Ser 57:23-33.
20. Gonzalez JM, Sherr EB, Sherr BF (1990) Size-selective grazing on bacteria by natural assemblages of estuarine flagellates and ciliates. Appl Environ Microbiol 56(3):583-589. (Pubitemid 20088423)
21. Jürgens K, Matz C (2002) Predation as a shaping force for the phenotypic and genotypic composition of planktonic bacteria. Antonie van Leeuwenhoek 81(1-4):413-434. (Pubitemid 35314630)
22. Moore LR, Goerickle R, Chisholm SW(1995) Comparative physiology of Synechococcus and Prochlorococcus: Influence of light and temperature on growth, pigments, fluorescence and absorptive properties. Mar Ecol Prog Ser 116:259-275.
23. Li WKW (1998) Annual average abundance of heterotrophic bacteria and Synechococcus in surface ocean waters. Limnol Oceanogr 43(7):1746-1753.
24. Agawin N, Sr., Duarte CM, Agustí S (1998) Growth and abundance of Synechococcus sp. in a Mediterranean Bay: Seasonality and relationship with temperature. Mar Ecol Prog Ser 170:45-53. (Pubitemid 28456157)
25. Li WKW, Dickie PM (2001) Monitoring phytoplankton, bacterioplankton, and virioplankton in a coastal inlet (Bedford Basin) by flow cytometry. Cytometry 44(3):236-246. (Pubitemid 32661047)
26. Waterbury JB, Valois FW (1993) Resistance to co-occurring phages enables marine synechococcus communities to coexist with cyanophages abundant in seawater. Appl Environ Microbiol 59(10):3393-3399. (Pubitemid 23296459)
27. Baudoux A-C, Veldhuis MJ, Witte HJ, Brussaard CP (2007) Viruses as mortality agents of picophytoplankton in the deep chlorophyll maximum layer during IRONAGES III. Limnol Oceanogr 52(6):2519-2529. (Pubitemid 350205805)
28. Tsai A-Y, et al. (2012) Viral lysis and nanoflagellate grazing as factors controlling diel variations of Synechococcus spp. summer abundance in coastal waters of Taiwan. Aquat Microb Ecol 66(2):159-167.
29. Landry MR, Calbet A (2004) Microzooplankton production in the oceans. ICES J Marine Sci 61(4):501-507. (Pubitemid 38851907)
30. Landry MR, Constantinou J, Kirshtein J (1995) Microzooplankton grazing in the central equatorial Pacific during February and August, 1992. Deep Sea Res Part II Top Stud Oceanogr 42(2-3):657-671. (Pubitemid 26449929)
31. Lui H, Campbell L, Landry MR (1995) Growth and mortality rates of Prochlorococcus and Synechococcus measured with a selective inhibitor technique. Mar Ecol Prog Ser 116:277-287. (Pubitemid 26446589)
32. Agawin NSR, Duarte CM, Agustí S (2000) Response of Mediterranean Synechococcus growth and loss rates to experimental nutrient inputs. Mar Ecol Prog Ser 206:97-106.
33. Strom S, Brainard M, Holmes J, Olson M (2001) Phytoplankton blooms are strongly impacted by microzooplankton grazing in coastal North Pacific waters. Mar Biol 138(2):355-368. (Pubitemid 32180308)
34. Palenik B (1994) Cyanobacterial community structure as seen from RNA polymerase gene sequence analysis. Appl Environ Microbiol 60(9):3212-3219.
35. Ahlgren NA, Rocap G (2006) Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies. Appl Environ Microbiol 72(11):7193-7204. (Pubitemid 44748433)
36. Olson RJ, Sosik HM (2007) A submersible imaging-in-flow instrument to analyze nanoand microplankton: Imaging FlowCytobot. Limnol Oceanogr Methods 5:195-203. (Pubitemid 351773987)
37. Dall'Olmo G, et al. (2011) Inferring phytoplankton carbon and eco-physiological rates from diel cycles of spectral particulate beam-attentuation coefficient. Biogeosciences 8(11):3423-3440.
38. Olson RJ, Chisholm SW, Zettler ER, Armbrust EV (1990) Pigments, size, and distribution of Synechococcus in the North Atlantic and Pacific Oceans. Limnol Oceanogr 35(1):45-58.