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Volumn 77, Issue , 2014, Pages 58-68

Short-term responses of microbial community and functioning to experimental CO2 enrichment and warming in a Chinese paddy field

Author keywords

Microbial biomass; Microbial community; Rice paddy; Simulated climate change; Warming

Indexed keywords

BACTERIA; BIOMASS; CARBON; CARBON DIOXIDE; ECOLOGY; FORESTRY; FUNGI; POLYMERASE CHAIN REACTION; SOCIAL SCIENCES; SOILS;

EID: 84903795691     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2014.06.011     Document Type: Article
Times cited : (70)

References (67)
  • 1
    • 56349118910 scopus 로고    scopus 로고
    • Warming and drying suppress microbial activity and carbon cycling in boreal forest soils
    • Allison S.D., Treseder K.K. Warming and drying suppress microbial activity and carbon cycling in boreal forest soils. Glob. Change Biol. 2008, 14:2898-2909.
    • (2008) Glob. Change Biol. , vol.14 , pp. 2898-2909
    • Allison, S.D.1    Treseder, K.K.2
  • 2
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann R.I., Ludwig W., Schleifer K.-H. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microb. Rev. 1995, 59:143-169.
    • (1995) Microb. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 4
    • 49449087467 scopus 로고    scopus 로고
    • Microbial contributions to climate change through carbon cycle feedbacks
    • Bardgett R.D., Freeman C., Ostle N.J. Microbial contributions to climate change through carbon cycle feedbacks. ISME J. 2008, 2:805-814.
    • (2008) ISME J. , vol.2 , pp. 805-814
    • Bardgett, R.D.1    Freeman, C.2    Ostle, N.J.3
  • 5
    • 73349112606 scopus 로고    scopus 로고
    • Linking microbial community structure and function to seasonal differences in soil moisture and temperature in a Chihuahuan desert grassland
    • Bell C.W., Acosta-Martinez V., McIntyre N.E., Cox S., Tissue D.T., Zak J.C. Linking microbial community structure and function to seasonal differences in soil moisture and temperature in a Chihuahuan desert grassland. Microb. Ecol. 2009, 58:827-842.
    • (2009) Microb. Ecol. , vol.58 , pp. 827-842
    • Bell, C.W.1    Acosta-Martinez, V.2    McIntyre, N.E.3    Cox, S.4    Tissue, D.T.5    Zak, J.C.6
  • 7
    • 0035019465 scopus 로고    scopus 로고
    • Environmental factors influencing the distribution of rRNA from Verrucomicrobia in soil
    • Buckley D.H., Schmidt T.M. Environmental factors influencing the distribution of rRNA from Verrucomicrobia in soil. FEMS Microbiol. Ecol. 2001, 35:105-112.
    • (2001) FEMS Microbiol. Ecol. , vol.35 , pp. 105-112
    • Buckley, D.H.1    Schmidt, T.M.2
  • 10
    • 84879317036 scopus 로고    scopus 로고
    • Biochar soil amendment increased bacterial but decreased fungal gene abundance with shifts in community structure in a slightly acid rice paddy from Southwest China
    • Chen J., Liu X., Zheng J., Zhang B., Lu H., Chi Z., Pan G., Li L., Zheng J., Zhang X. Biochar soil amendment increased bacterial but decreased fungal gene abundance with shifts in community structure in a slightly acid rice paddy from Southwest China. Appl. Soil Ecol. 2013, 71:33-44.
    • (2013) Appl. Soil Ecol. , vol.71 , pp. 33-44
    • Chen, J.1    Liu, X.2    Zheng, J.3    Zhang, B.4    Lu, H.5    Chi, Z.6    Pan, G.7    Li, L.8    Zheng, J.9    Zhang, X.10
  • 11
    • 0034960139 scopus 로고    scopus 로고
    • Effects of elevated carbon dioxide concentration on biological nitrogen fixation, nitrogen mineralization and carbon decomposition in submerged rice soil
    • Cheng W., Inubushi K., Yagi K., Sakai H., Kobayashi K. Effects of elevated carbon dioxide concentration on biological nitrogen fixation, nitrogen mineralization and carbon decomposition in submerged rice soil. Biol. Fertil. Soils 2001, 34:7-13.
    • (2001) Biol. Fertil. Soils , vol.34 , pp. 7-13
    • Cheng, W.1    Inubushi, K.2    Yagi, K.3    Sakai, H.4    Kobayashi, K.5
  • 12
    • 80054726016 scopus 로고    scopus 로고
    • 2 and temperature on microbial biomass and enzyme activities in tropical rice soils
    • 2 and temperature on microbial biomass and enzyme activities in tropical rice soils. Environ. Monit. Assess. 2011, 182:555-569.
    • (2011) Environ. Monit. Assess. , vol.182 , pp. 555-569
    • Das, S.1    Bhattacharyya, P.2    Adhya, T.3
  • 14
    • 38349096529 scopus 로고    scopus 로고
    • 2, warming, and reduced precipitation interact to affect soil moisture and LAI in an old field ecosystem?
    • 2, warming, and reduced precipitation interact to affect soil moisture and LAI in an old field ecosystem?. Plant Soil 2007, 301:255-266.
    • (2007) Plant Soil , vol.301 , pp. 255-266
    • Dermody, O.1    Weltzin, J.F.2    Engel, E.C.3    Allen, P.4    Norby, R.J.5
  • 15
    • 33846818480 scopus 로고    scopus 로고
    • 2 changes the function and structural diversity of soil microorganisms in a grassland
    • 2 changes the function and structural diversity of soil microorganisms in a grassland. Eur. J. Soil Sci. 2007, 58:260-269.
    • (2007) Eur. J. Soil Sci. , vol.58 , pp. 260-269
    • Drissner, D.1    Blum, H.2    Tscherko, D.3    Kandeler, E.4
  • 16
    • 22144470189 scopus 로고    scopus 로고
    • Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays
    • Fierer N., Jackson J.A., Vilgalys R., Jackson R.B. Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays. Appl. Environ. Microbiol. 2005, 71:4117-4120.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 4117-4120
    • Fierer, N.1    Jackson, J.A.2    Vilgalys, R.3    Jackson, R.B.4
  • 17
    • 33947236971 scopus 로고    scopus 로고
    • Toward an ecological classification of soil bacteria
    • Fierer N., Bradford M.A., Jackson R.B. Toward an ecological classification of soil bacteria. Ecology 2007, 88:1354-1364.
    • (2007) Ecology , vol.88 , pp. 1354-1364
    • Fierer, N.1    Bradford, M.A.2    Jackson, R.B.3
  • 18
    • 70350381766 scopus 로고    scopus 로고
    • Elevated temperatures and carbon dioxide concentrations: effects on selected microbial activities in temperate agricultural soils
    • French S., Levy-Booth D., Samarajeewa A., Shannon K., Smith J., Trevors J. Elevated temperatures and carbon dioxide concentrations: effects on selected microbial activities in temperate agricultural soils. World J. Microbiol. Biotechnol. 2009, 25:1887-1900.
    • (2009) World J. Microbiol. Biotechnol. , vol.25 , pp. 1887-1900
    • French, S.1    Levy-Booth, D.2    Samarajeewa, A.3    Shannon, K.4    Smith, J.5    Trevors, J.6
  • 19
    • 53449089620 scopus 로고    scopus 로고
    • Microbial biomass, functional capacity, and community structure after 12 years of soil warming
    • Frey S., Drijber R., Smith H., Melillo J. Microbial biomass, functional capacity, and community structure after 12 years of soil warming. Soil Biol. Biochem. 2008, 40:2904-2907.
    • (2008) Soil Biol. Biochem. , vol.40 , pp. 2904-2907
    • Frey, S.1    Drijber, R.2    Smith, H.3    Melillo, J.4
  • 20
    • 83055173838 scopus 로고    scopus 로고
    • Multiple climate change factors interact to alter soil microbial community structure in an old-field ecosystem
    • Gray S.B., Classen A.T., Kardol P., Yermakov Z., Michael Mille R. Multiple climate change factors interact to alter soil microbial community structure in an old-field ecosystem. Soil Sci. Soc. Am. J. 2011, 75:2217-2226.
    • (2011) Soil Sci. Soc. Am. J. , vol.75 , pp. 2217-2226
    • Gray, S.B.1    Classen, A.T.2    Kardol, P.3    Yermakov, Z.4    Michael Mille, R.5
  • 23
    • 0035658361 scopus 로고    scopus 로고
    • Biological dinitrogen fixation and soil microbial biomass carbon as influenced by free-air carbon dioxide enrichment (FACE) at three levels of nitrogen fertilization in a paddy field
    • Hoque M.M., Inubushi K., Miura S., Kobayashi K., Kim H.-Y., Okada M., Yabashi S. Biological dinitrogen fixation and soil microbial biomass carbon as influenced by free-air carbon dioxide enrichment (FACE) at three levels of nitrogen fertilization in a paddy field. Biol. Fertil. Soils 2001, 34:453-459.
    • (2001) Biol. Fertil. Soils , vol.34 , pp. 453-459
    • Hoque, M.M.1    Inubushi, K.2    Miura, S.3    Kobayashi, K.4    Kim, H.-Y.5    Okada, M.6    Yabashi, S.7
  • 25
    • 5044240973 scopus 로고    scopus 로고
    • Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
    • Huber T., Faulkner G., Hugenholtz P. Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 2004, 20:2317-2319.
    • (2004) Bioinformatics , vol.20 , pp. 2317-2319
    • Huber, T.1    Faulkner, G.2    Hugenholtz, P.3
  • 32
    • 33746726482 scopus 로고    scopus 로고
    • Response of soil microbial biomass and enzyme activities to the transient elevation of carbon dioxide in a semi-arid grassland
    • Kandeler E., Mosier A.R., Morgan J.A., Milchunas D.G., King J.Y., Rudolph S., Tscherko D. Response of soil microbial biomass and enzyme activities to the transient elevation of carbon dioxide in a semi-arid grassland. Soil Biol. Biochem. 2006, 38:2448-2460.
    • (2006) Soil Biol. Biochem. , vol.38 , pp. 2448-2460
    • Kandeler, E.1    Mosier, A.R.2    Morgan, J.A.3    Milchunas, D.G.4    King, J.Y.5    Rudolph, S.6    Tscherko, D.7
  • 35
    • 29144519460 scopus 로고    scopus 로고
    • 2 on soil microbial biomass, activity, and diversity in a chaparral ecosystem
    • 2 on soil microbial biomass, activity, and diversity in a chaparral ecosystem. Appl. Environ. Microbiol. 2005, 71:8573-8580.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 8573-8580
    • Lipson, D.A.1    Wilson, R.F.2    Oechel, W.C.3
  • 36
    • 84862200965 scopus 로고    scopus 로고
    • Decline in topsoil microbial quotient, fungal abundance and C utilization efficiency of rice paddies under heavy metal pollution across South China
    • Liu Y., Zhou T., Crowley D., Li L., Liu D., Zheng J., Yu X., Pan G., Hussain Q., Zhang X. Decline in topsoil microbial quotient, fungal abundance and C utilization efficiency of rice paddies under heavy metal pollution across South China. PloS One 2012, 7:e38858.
    • (2012) PloS One , vol.7
    • Liu, Y.1    Zhou, T.2    Crowley, D.3    Li, L.4    Liu, D.5    Zheng, J.6    Yu, X.7    Pan, G.8    Hussain, Q.9    Zhang, X.10
  • 38
    • 23644433664 scopus 로고    scopus 로고
    • In situ stable isotope probing of methanogenic archaea in the rice rhizosphere
    • Lu Y., Conrad R. In situ stable isotope probing of methanogenic archaea in the rice rhizosphere. Science 2005, 309:1088-1090.
    • (2005) Science , vol.309 , pp. 1088-1090
    • Lu, Y.1    Conrad, R.2
  • 39
    • 36048960135 scopus 로고    scopus 로고
    • Terrestrial carbon-cycle feedback to climate warming
    • Luo Y. Terrestrial carbon-cycle feedback to climate warming. Annu. Rev. Ecol. Evol. Syst. 2007, 38:683-712.
    • (2007) Annu. Rev. Ecol. Evol. Syst. , vol.38 , pp. 683-712
    • Luo, Y.1
  • 41
    • 0035846111 scopus 로고    scopus 로고
    • Acclimatization of soil respiration to warming in a tall grass prairie
    • Luo Y., Wan S., Hui D., Wallace L.L. Acclimatization of soil respiration to warming in a tall grass prairie. Nature 2001, 413:622-625.
    • (2001) Nature , vol.413 , pp. 622-625
    • Luo, Y.1    Wan, S.2    Hui, D.3    Wallace, L.L.4
  • 42
    • 77956746798 scopus 로고    scopus 로고
    • Do climate warming and plant species richness affect potential nitrification, basal respiration and ammonia-oxidizing bacteria in experimental grasslands?
    • Malchair S., De Boeck H., Lemmens C., Merckx R., Nijs I., Ceulemans R., Carnol M. Do climate warming and plant species richness affect potential nitrification, basal respiration and ammonia-oxidizing bacteria in experimental grasslands?. Soil Biol. Biochem. 2010, 42:1944-1951.
    • (2010) Soil Biol. Biochem. , vol.42 , pp. 1944-1951
    • Malchair, S.1    De Boeck, H.2    Lemmens, C.3    Merckx, R.4    Nijs, I.5    Ceulemans, R.6    Carnol, M.7
  • 43
    • 0034786132 scopus 로고    scopus 로고
    • Amicroplate fluorimetric assay for the study of enzyme diversity in soils
    • Marx M.C., Wood M., Jarvis S.C. Amicroplate fluorimetric assay for the study of enzyme diversity in soils. Soil Biol. Biochem. 2001, 33:1633-1640.
    • (2001) Soil Biol. Biochem. , vol.33 , pp. 1633-1640
    • Marx, M.C.1    Wood, M.2    Jarvis, S.C.3
  • 44
    • 0030620440 scopus 로고    scopus 로고
    • Vertical distribution and phylogenetic characterization of marine planktonic archaea in the Santa Barbara Channel
    • Massana R., Murray A.E., Preston C.M., DeLong E.F. Vertical distribution and phylogenetic characterization of marine planktonic archaea in the Santa Barbara Channel. Appl. Environ. Microbiol. 1997, 63:50-56.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 50-56
    • Massana, R.1    Murray, A.E.2    Preston, C.M.3    DeLong, E.F.4
  • 45
    • 0034767175 scopus 로고    scopus 로고
    • Comparative denaturing gradient gel electrophoresis analysis of fungal communities associated with whole plant corn silage
    • May L.A., Smiley B., Schmidt M.G. Comparative denaturing gradient gel electrophoresis analysis of fungal communities associated with whole plant corn silage. Can. J. Microbiol. 2001, 47:829-841.
    • (2001) Can. J. Microbiol. , vol.47 , pp. 829-841
    • May, L.A.1    Smiley, B.2    Schmidt, M.G.3
  • 48
    • 0030805150 scopus 로고    scopus 로고
    • Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA
    • Ovreas L., Forney L., Daae F.L., Torsvik V. Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Appl. Environ. Microbiol. 1997, 63:3367-3373.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3367-3373
    • Ovreas, L.1    Forney, L.2    Daae, F.L.3    Torsvik, V.4
  • 51
    • 78651319300 scopus 로고    scopus 로고
    • Soil organisms and global climate change
    • Pritchard S. Soil organisms and global climate change. Plant Pathol. 2011, 60:82-99.
    • (2011) Plant Pathol. , vol.60 , pp. 82-99
    • Pritchard, S.1
  • 53
    • 33644962444 scopus 로고    scopus 로고
    • Effect of pH on isolation and distribution of members of subdivision 1 of the phylum Acidobacteria occurring in soil
    • Sait M., Davis K.E., Janssen P.H. Effect of pH on isolation and distribution of members of subdivision 1 of the phylum Acidobacteria occurring in soil. Appl. Environ. Microbiol. 2006, 72:1852-1857.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 1852-1857
    • Sait, M.1    Davis, K.E.2    Janssen, P.H.3
  • 55
    • 50249150207 scopus 로고    scopus 로고
    • Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities
    • Schutte U.E., Abdo Z., Bent S., Shyu C., Williams C., Pierson J., Forney L. Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities. Appl. Microb. Biotechnol. 2008, 80:365-380.
    • (2008) Appl. Microb. Biotechnol. , vol.80 , pp. 365-380
    • Schutte, U.E.1    Abdo, Z.2    Bent, S.3    Shyu, C.4    Williams, C.5    Pierson, J.6    Forney, L.7
  • 57
    • 0003341851 scopus 로고
    • Development and application of nucleic acid probes
    • Wiley, J, Chichester, UK
    • Stahl D.A. Development and application of nucleic acid probes. Nucleic Acid Techniques in Bacterial Systematics 1991, 205-248. Wiley, J, Chichester, UK.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 205-248
    • Stahl, D.A.1
  • 58
    • 0032889803 scopus 로고    scopus 로고
    • Invertase and xylanase activity of bulk soil and particle-size fractions during maize straw decomposition
    • Stemmer M., Gerzabek M.H., Kandeler E. Invertase and xylanase activity of bulk soil and particle-size fractions during maize straw decomposition. Soil Biol. Biochem 1998, 31:9-18.
    • (1998) Soil Biol. Biochem , vol.31 , pp. 9-18
    • Stemmer, M.1    Gerzabek, M.H.2    Kandeler, E.3
  • 60
    • 0036207999 scopus 로고    scopus 로고
    • Carbon assimilation and partitioning into non-structural carbohydrate in contrasting varieties of Lolium perenne. J
    • Turner L.B., Humphreys M.O., Cairns A.J., Pollock C.J. Carbon assimilation and partitioning into non-structural carbohydrate in contrasting varieties of Lolium perenne. J. Plant Physiol 2002, 159:257-263.
    • (2002) Plant Physiol , vol.159 , pp. 257-263
    • Turner, L.B.1    Humphreys, M.O.2    Cairns, A.J.3    Pollock, C.J.4
  • 61
    • 0030741006 scopus 로고    scopus 로고
    • Potential responses of soil organic carbon to global environmental change
    • Trumbore S.E. Potential responses of soil organic carbon to global environmental change. PNAS 1997, 94:8284-8291.
    • (1997) PNAS , vol.94 , pp. 8284-8291
    • Trumbore, S.E.1
  • 63
    • 0035013630 scopus 로고    scopus 로고
    • Microbial interactions and biocontrol in the rhizosphere
    • Whipps J.M. Microbial interactions and biocontrol in the rhizosphere. J.Exp. Bot. 2001, 52:487-511.
    • (2001) J.Exp. Bot. , vol.52 , pp. 487-511
    • Whipps, J.M.1
  • 65
    • 0000487154 scopus 로고
    • Measurement of soil microbial biomass C by fumigation-extraction-an automated procedure
    • Wu J., Joergensen R., Pommerening B., Chaussod R., Brookes P. Measurement of soil microbial biomass C by fumigation-extraction-an automated procedure. Soil Biol. Biochem. 1990, 22:1167-1169.
    • (1990) Soil Biol. Biochem. , vol.22 , pp. 1167-1169
    • Wu, J.1    Joergensen, R.2    Pommerening, B.3    Chaussod, R.4    Brookes, P.5
  • 66
    • 33749625946 scopus 로고    scopus 로고
    • Fingerprinting global climate change and forest management within rhizosphere carbon and nutrient cycling processes
    • Xu Z., Chen C., Xu Z. Fingerprinting global climate change and forest management within rhizosphere carbon and nutrient cycling processes. Environ. Sci. Pollut. Res. Int. 2006, 13:293-298.
    • (2006) Environ. Sci. Pollut. Res. Int. , vol.13 , pp. 293-298
    • Xu, Z.1    Chen, C.2    Xu, Z.3


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